Wall clock time and date at job start Sat Mar 6 2021 14:40:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42891 * 1 3 3 C 1.35908 * 117.00165 * 2 1 4 4 C 1.38709 * 120.05457 * 180.02562 * 3 2 1 5 5 C 1.38166 * 119.94284 * 179.97438 * 4 3 2 6 6 C 1.50696 * 119.97365 * 179.97438 * 5 4 3 7 7 H 1.08999 * 112.84914 * 11.20022 * 6 5 4 8 8 C 1.53781 * 113.69134 * 142.46492 * 6 5 4 9 9 C 1.54049 * 87.08031 * 139.98880 * 8 6 5 10 10 H 1.08992 * 113.69868 * 220.05225 * 9 8 6 11 11 N 1.46506 * 113.61276 * 89.07129 * 9 8 6 12 12 C 1.34772 * 120.00033 * 107.61836 * 11 9 8 13 13 O 1.21282 * 119.99778 * 0.02562 * 12 11 9 14 14 C 1.50695 * 120.00305 * 179.97438 * 12 11 9 15 15 O 1.42899 * 109.47400 * 180.02562 * 14 12 11 16 16 C 1.35901 * 117.00383 * 180.02562 * 15 14 12 17 17 C 1.38735 * 120.04969 * 359.72365 * 16 15 14 18 18 C 1.38147 * 119.93722 * 179.70534 * 17 16 15 19 19 C 1.38268 * 120.05727 * 0.59172 * 18 17 16 20 20 C 1.50700 * 119.94163 * 179.70552 * 19 18 17 21 21 O 1.42900 * 109.46719 * 244.97836 * 20 19 18 22 22 Si 1.86296 * 109.47457 * 4.97999 * 20 19 18 23 23 C 1.38263 * 120.10957 * 359.68628 * 19 18 17 24 24 C 1.38142 * 120.05977 * 0.02562 * 23 19 18 25 25 C 1.53781 * 113.61615 * 240.00093 * 6 5 4 26 26 C 1.38247 * 120.05495 * 0.27776 * 5 4 3 27 27 C 1.38298 * 120.10940 * 359.44438 * 26 5 4 28 28 C 1.38125 * 120.05167 * 0.55755 * 27 26 5 29 29 H 1.09001 * 109.47039 * 299.99309 * 1 2 3 30 30 H 1.09002 * 109.47696 * 59.99484 * 1 2 3 31 31 H 1.08999 * 109.47436 * 179.97438 * 1 2 3 32 32 H 1.08006 * 120.03253 * 359.95519 * 4 3 2 33 33 H 1.09005 * 113.61471 * 254.54463 * 8 6 5 34 34 H 1.09003 * 113.61469 * 25.44241 * 8 6 5 35 35 H 0.97002 * 119.99888 * 287.62233 * 11 9 8 36 36 H 1.08997 * 109.47408 * 300.00785 * 14 12 11 37 37 H 1.09001 * 109.46758 * 60.00713 * 14 12 11 38 38 H 1.08000 * 120.03181 * 359.97438 * 17 16 15 39 39 H 1.07997 * 119.97194 * 180.28142 * 18 17 16 40 40 H 1.09002 * 109.47205 * 124.98415 * 20 19 18 41 41 H 0.96708 * 114.00112 * 180.02562 * 21 20 19 42 42 H 1.48502 * 110.00149 * 300.00000 * 22 20 19 43 43 H 1.48500 * 110.00088 * 61.31999 * 22 20 19 44 44 H 1.08003 * 119.96662 * 179.97438 * 23 19 18 45 45 H 1.07997 * 120.03003 * 179.97438 * 24 23 19 46 46 H 1.09002 * 113.61445 * 334.48493 * 25 6 5 47 47 H 1.09002 * 113.61408 * 105.30224 * 25 6 5 48 48 H 1.07998 * 119.94759 * 179.70992 * 26 5 4 49 49 H 1.07999 * 119.96783 * 180.25493 * 27 26 5 50 50 H 1.08003 * 120.02271 * 179.70366 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4311 1.2848 -0.0005 5 6 4.0560 2.5171 -0.0011 6 6 5.5607 2.5981 -0.0011 7 1 6.0364 1.6369 -0.1957 8 6 6.1177 3.7461 -0.8595 9 6 7.1545 3.9729 0.2570 10 1 7.3519 5.0245 0.4646 11 7 8.3784 3.1851 0.0902 12 6 9.5247 3.7907 -0.2782 13 8 9.5430 4.9880 -0.4712 14 6 10.7837 2.9806 -0.4493 15 8 11.8551 3.8419 -0.8398 16 6 13.0696 3.2652 -1.0377 17 6 13.2283 1.8992 -0.8542 18 6 14.4625 1.3145 -1.0620 19 6 15.5420 2.0912 -1.4406 20 6 16.8887 1.4516 -1.6601 21 8 17.8134 1.9428 -0.6876 22 14 16.7332 -0.3971 -1.4910 23 6 15.3876 3.4536 -1.6185 24 6 14.1542 4.0424 -1.4178 25 6 6.1380 3.3353 1.2189 26 6 3.3019 3.6758 0.0047 27 6 1.9208 3.6048 -0.0005 28 6 1.2914 2.3752 0.0001 29 1 -0.3633 0.5137 0.8901 30 1 -0.3634 0.5139 -0.8899 31 1 -0.3634 -1.0276 -0.0005 32 1 4.0207 0.3799 -0.0002 33 1 6.5554 3.4145 -1.8012 34 1 5.4216 4.5756 -0.9841 35 1 8.3638 2.2276 0.2448 36 1 11.0340 2.4945 0.4936 37 1 10.6271 2.2237 -1.2179 38 1 12.3867 1.2929 -0.5534 39 1 14.5856 0.2505 -0.9237 40 1 17.2485 1.6961 -2.6595 41 1 18.7034 1.5733 -0.7691 42 1 16.2435 -0.7436 -0.1326 43 1 15.7986 -0.9242 -2.5176 44 1 16.2324 4.0582 -1.9139 45 1 14.0343 5.1066 -1.5565 46 1 5.4475 4.0525 1.6626 47 1 6.5907 2.6720 1.9559 48 1 3.7922 4.6381 0.0090 49 1 1.3340 4.5114 -0.0001 50 1 0.2127 2.3203 0.0008 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10812630_2989410.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:40:51 Heat of formation + Delta-G solvation = -49.589558 kcal Electronic energy + Delta-G solvation = -31255.172574 eV Core-core repulsion = 26795.023214 eV Total energy + Delta-G solvation = -4460.149360 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.166 amu Computer time = 1.54 seconds Orbital eigenvalues (eV) -41.86124 -41.42932 -40.81998 -39.81134 -38.90829 -37.88046 -37.18361 -34.68579 -32.60328 -32.17597 -31.92402 -31.07291 -29.59626 -28.25353 -26.72063 -26.34849 -25.84835 -24.21996 -23.60750 -22.65684 -22.24685 -21.82834 -20.34400 -19.62893 -18.80754 -18.43834 -18.27130 -17.54176 -17.43324 -17.25413 -16.94436 -16.81337 -16.71111 -16.69279 -16.01657 -15.79468 -15.68563 -15.57473 -15.31507 -14.98105 -14.54079 -14.45689 -14.35985 -14.14930 -14.04538 -13.94057 -13.69407 -13.50075 -13.47132 -13.28799 -13.20944 -12.70885 -12.52072 -12.32799 -12.24102 -12.13812 -12.03180 -11.88503 -11.67472 -11.61517 -11.31224 -11.10341 -10.27681 -10.22639 -10.18218 -9.77232 -9.34640 -9.18044 -4.92166 0.11468 0.16824 0.30057 0.45268 1.32592 1.34145 1.36496 1.65889 1.97083 2.32895 2.47924 2.50354 2.71035 3.36779 3.42479 3.48606 3.60053 3.64382 3.70800 3.73859 3.85230 3.89979 3.91955 3.97042 3.99912 4.06613 4.13807 4.16449 4.25475 4.30730 4.32626 4.36265 4.40711 4.51975 4.58289 4.59157 4.62505 4.68965 4.75389 4.80687 4.81005 4.93834 4.98532 5.03091 5.07101 5.08672 5.09904 5.31852 5.36539 5.43049 5.48841 5.55951 5.67140 5.79972 6.13688 6.37287 6.41240 6.93319 7.04110 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.340 6.340 3 C 0.109 3.891 4 C -0.165 4.165 5 C -0.034 4.034 6 C -0.067 4.067 7 H 0.113 0.887 8 C -0.141 4.141 9 C 0.116 3.884 10 H 0.087 0.913 11 N -0.692 5.692 12 C 0.518 3.482 13 O -0.569 6.569 14 C 0.035 3.965 15 O -0.314 6.314 16 C 0.122 3.878 17 C -0.202 4.202 18 C -0.098 4.098 19 C -0.129 4.129 20 C -0.077 4.077 21 O -0.566 6.566 22 Si 0.773 3.227 23 C -0.056 4.056 24 C -0.160 4.160 25 C -0.122 4.122 26 C -0.161 4.161 27 C -0.084 4.084 28 C -0.222 4.222 29 H 0.063 0.937 30 H 0.062 0.938 31 H 0.115 0.885 32 H 0.133 0.867 33 H 0.069 0.931 34 H 0.099 0.901 35 H 0.421 0.579 36 H 0.124 0.876 37 H 0.125 0.875 38 H 0.161 0.839 39 H 0.126 0.874 40 H 0.092 0.908 41 H 0.403 0.597 42 H -0.294 1.294 43 H -0.287 1.287 44 H 0.147 0.853 45 H 0.137 0.863 46 H 0.102 0.898 47 H 0.090 0.910 48 H 0.138 0.862 49 H 0.142 0.858 50 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.091 -6.036 -0.027 6.037 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.254 6.254 3 C 0.064 3.936 4 C -0.183 4.183 5 C -0.035 4.035 6 C -0.085 4.085 7 H 0.131 0.869 8 C -0.179 4.179 9 C 0.010 3.990 10 H 0.105 0.895 11 N -0.346 5.346 12 C 0.304 3.696 13 O -0.447 6.447 14 C -0.043 4.043 15 O -0.228 6.228 16 C 0.077 3.923 17 C -0.220 4.220 18 C -0.116 4.116 19 C -0.130 4.130 20 C -0.187 4.187 21 O -0.376 6.376 22 Si 0.679 3.321 23 C -0.074 4.074 24 C -0.178 4.178 25 C -0.160 4.160 26 C -0.179 4.179 27 C -0.102 4.102 28 C -0.240 4.240 29 H 0.082 0.918 30 H 0.081 0.919 31 H 0.133 0.867 32 H 0.151 0.849 33 H 0.088 0.912 34 H 0.117 0.883 35 H 0.259 0.741 36 H 0.141 0.859 37 H 0.142 0.858 38 H 0.178 0.822 39 H 0.143 0.857 40 H 0.110 0.890 41 H 0.254 0.746 42 H -0.222 1.222 43 H -0.214 1.214 44 H 0.165 0.835 45 H 0.155 0.845 46 H 0.121 0.879 47 H 0.109 0.891 48 H 0.156 0.844 49 H 0.160 0.840 50 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges -1.104 -5.513 0.156 5.625 hybrid contribution -0.923 0.137 -0.035 0.934 sum -2.028 -5.376 0.121 5.747 Atomic orbital electron populations 1.23291 0.76663 1.05390 1.02099 1.86038 1.23271 1.27294 1.88791 1.19299 0.92884 0.84619 0.96787 1.20507 0.91435 0.98869 1.07513 1.19614 0.95568 0.91821 0.96450 1.21623 0.89893 0.99578 0.97413 0.86927 1.23606 0.97756 0.98863 0.97703 1.21916 0.83161 0.96324 0.97573 0.89479 1.45348 1.07401 1.12594 1.69228 1.20436 0.85224 0.87772 0.76183 1.90766 1.85972 1.17115 1.50808 1.22746 0.84083 0.92691 1.04771 1.86130 1.16181 1.36915 1.83531 1.19162 0.84927 0.92012 0.96244 1.21400 0.99669 0.93509 1.07424 1.20893 0.93170 0.99175 0.98358 1.19677 0.94835 0.94661 1.03783 1.24805 0.88295 1.10357 0.95206 1.86450 1.24962 1.71440 1.54721 0.94316 0.87336 0.73970 0.76491 1.21020 0.96399 0.94043 0.95902 1.20732 0.91254 1.01026 1.04801 1.23367 0.96698 0.99877 0.96023 1.21179 0.93818 0.98802 1.04110 1.21243 0.95023 0.97551 0.96410 1.21488 1.00936 0.92437 1.09188 0.91834 0.91920 0.86659 0.84898 0.91228 0.88296 0.74111 0.85865 0.85785 0.82198 0.85708 0.89008 0.74628 1.22233 1.21437 0.83521 0.84463 0.87939 0.89105 0.84379 0.83997 0.84307 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 9.81 113.37 1.11 1.07 16 2 O -0.34 -1.72 10.50 -92.51 -0.97 -2.69 16 3 C 0.11 0.52 6.69 22.50 0.15 0.67 16 4 C -0.16 -0.50 9.65 22.37 0.22 -0.28 16 5 C -0.03 0.00 5.29 -19.88 -0.11 -0.11 16 6 C -0.07 0.29 3.85 -11.01 -0.04 0.25 16 7 H 0.11 -0.79 8.09 -2.39 -0.02 -0.81 16 8 C -0.14 0.34 7.27 31.21 0.23 0.57 16 9 C 0.12 -0.21 4.34 45.61 0.20 -0.01 16 10 H 0.09 0.27 7.47 -2.39 -0.02 0.25 16 11 N -0.69 2.48 5.26 -439.60 -2.31 0.17 16 12 C 0.52 1.89 7.91 87.66 0.69 2.58 16 13 O -0.57 -8.60 16.10 16.00 0.26 -8.34 16 14 C 0.03 -0.04 5.22 71.23 0.37 0.33 16 15 O -0.31 -2.49 9.67 -73.40 -0.71 -3.20 16 16 C 0.12 0.81 6.69 22.51 0.15 0.96 16 17 C -0.20 -0.58 9.04 22.37 0.20 -0.38 16 18 C -0.10 -0.46 8.66 22.26 0.19 -0.27 16 19 C -0.13 -0.66 5.38 -19.85 -0.11 -0.77 16 20 C -0.08 0.03 2.79 71.24 0.20 0.23 16 21 O -0.57 -0.04 12.81 -148.98 -1.91 -1.95 16 22 Si 0.77 -1.99 29.85 68.60 2.05 0.06 16 23 C -0.06 -0.30 9.68 22.25 0.22 -0.08 16 24 C -0.16 -1.12 9.99 22.36 0.22 -0.90 16 25 C -0.12 0.65 7.28 31.12 0.23 0.88 16 26 C -0.16 0.01 8.59 22.29 0.19 0.20 16 27 C -0.08 -0.05 10.04 22.26 0.22 0.18 16 28 C -0.22 -0.49 9.04 22.36 0.20 -0.28 16 29 H 0.06 -0.25 7.66 -2.39 -0.02 -0.27 16 30 H 0.06 -0.24 7.66 -2.39 -0.02 -0.26 16 31 H 0.12 -0.65 8.14 -2.39 -0.02 -0.67 16 32 H 0.13 0.14 8.05 -2.91 -0.02 0.12 16 33 H 0.07 -0.06 8.14 -2.38 -0.02 -0.08 16 34 H 0.10 -0.25 6.33 -2.39 -0.02 -0.26 16 35 H 0.42 -4.57 8.70 -92.71 -0.81 -5.37 16 36 H 0.12 -0.88 7.65 -2.39 -0.02 -0.90 16 37 H 0.12 -0.91 7.67 -2.39 -0.02 -0.93 16 38 H 0.16 -0.69 6.30 -2.91 -0.02 -0.70 16 39 H 0.13 0.37 4.86 -2.91 -0.01 0.36 16 40 H 0.09 -0.40 7.96 -2.39 -0.02 -0.42 16 41 H 0.40 -4.25 8.74 -74.05 -0.65 -4.90 16 42 H -0.29 -1.30 7.05 99.48 0.70 -0.60 16 43 H -0.29 -0.73 7.11 99.48 0.71 -0.02 16 44 H 0.15 0.30 8.06 -2.91 -0.02 0.28 16 45 H 0.14 0.82 8.06 -2.91 -0.02 0.79 16 46 H 0.10 -0.52 7.71 -2.39 -0.02 -0.54 16 47 H 0.09 -0.67 8.14 -2.39 -0.02 -0.69 16 48 H 0.14 -0.46 6.68 -2.91 -0.02 -0.48 16 49 H 0.14 -0.50 8.06 -2.91 -0.02 -0.52 16 50 H 0.14 -0.18 6.30 -2.91 -0.02 -0.20 16 Total: 0.00 -28.67 411.99 0.71 -27.96 By element: Atomic # 1 Polarization: -16.38 SS G_CDS: -0.43 Total: -16.82 kcal Atomic # 6 Polarization: 0.08 SS G_CDS: 4.74 Total: 4.82 kcal Atomic # 7 Polarization: 2.48 SS G_CDS: -2.31 Total: 0.17 kcal Atomic # 8 Polarization: -12.86 SS G_CDS: -3.33 Total: -16.19 kcal Atomic # 14 Polarization: -1.99 SS G_CDS: 2.05 Total: 0.06 kcal Total: -28.67 0.71 -27.96 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10812630_2989410.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -21.626 kcal (2) G-P(sol) polarization free energy of solvation -28.674 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -50.300 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.711 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.963 kcal (6) G-S(sol) free energy of system = (1) + (5) -49.590 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.54 seconds