Wall clock time and date at job start Sat Mar 6 2021 14:40:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35903 * 117.00224 * 2 1 4 4 C 1.38703 * 120.05406 * 179.72763 * 3 2 1 5 5 C 1.38168 * 119.94277 * 180.25131 * 4 3 2 6 6 C 1.50705 * 119.97009 * 180.02562 * 5 4 3 7 7 H 1.08998 * 112.84933 * 11.19671 * 6 5 4 8 8 C 1.53780 * 113.61052 * 142.50285 * 6 5 4 9 9 C 1.53782 * 87.08152 * 139.98195 * 8 6 5 10 10 H 1.09000 * 113.69150 * 220.01016 * 9 8 6 11 11 N 1.46497 * 113.61685 * 89.11477 * 9 8 6 12 12 C 1.34779 * 120.00147 * 107.49980 * 11 9 8 13 13 O 1.21283 * 119.99872 * 0.02562 * 12 11 9 14 14 C 1.50695 * 119.99955 * 180.02562 * 12 11 9 15 15 C 1.53003 * 109.46993 * 180.02562 * 14 12 11 16 16 O 1.42899 * 109.46985 * 179.97438 * 15 14 12 17 17 C 1.35900 * 117.00015 * 180.02562 * 16 15 14 18 18 C 1.38732 * 120.05424 * 359.72661 * 17 16 15 19 19 C 1.38154 * 119.94475 * 179.74660 * 18 17 16 20 20 C 1.38267 * 120.05176 * 0.50348 * 19 18 17 21 21 C 1.50703 * 119.93965 * 179.74556 * 20 19 18 22 22 O 1.42901 * 109.47272 * 245.02218 * 21 20 19 23 23 Si 1.86293 * 109.47141 * 5.02888 * 21 20 19 24 24 C 1.38268 * 120.11244 * 359.77586 * 20 19 18 25 25 C 1.38142 * 120.05407 * 359.97048 * 24 20 19 26 26 C 1.53779 * 113.61291 * 239.99735 * 6 5 4 27 27 C 1.38241 * 120.05773 * 0.02562 * 5 4 3 28 28 C 1.38287 * 120.10676 * 359.97438 * 27 5 4 29 29 C 1.38116 * 120.06102 * 359.97438 * 28 27 5 30 30 H 1.09004 * 109.46917 * 300.00870 * 1 2 3 31 31 H 1.08998 * 109.46815 * 60.00240 * 1 2 3 32 32 H 1.08999 * 109.47402 * 180.02562 * 1 2 3 33 33 H 1.08008 * 120.03042 * 0.24237 * 4 3 2 34 34 H 1.08998 * 113.61675 * 254.52850 * 8 6 5 35 35 H 1.08996 * 113.61827 * 25.43326 * 8 6 5 36 36 H 0.97003 * 120.00117 * 287.50809 * 11 9 8 37 37 H 1.08995 * 109.47273 * 300.00475 * 14 12 11 38 38 H 1.08994 * 109.47196 * 60.00551 * 14 12 11 39 39 H 1.09004 * 109.47227 * 299.99894 * 15 14 12 40 40 H 1.08999 * 109.47403 * 60.00203 * 15 14 12 41 41 H 1.08000 * 120.03013 * 359.97438 * 18 17 16 42 42 H 1.07996 * 119.97057 * 180.23404 * 19 18 17 43 43 H 1.09002 * 109.46779 * 125.02740 * 21 20 19 44 44 H 0.96692 * 114.00006 * 180.02562 * 22 21 20 45 45 H 1.48506 * 109.99984 * 178.68198 * 23 21 20 46 46 H 1.48501 * 110.00060 * 299.99290 * 23 21 20 47 47 H 1.08003 * 119.96826 * 179.97438 * 24 20 19 48 48 H 1.08002 * 120.02557 * 179.97438 * 25 24 20 49 49 H 1.08994 * 113.61802 * 334.56928 * 26 6 5 50 50 H 1.09000 * 113.61199 * 105.39305 * 26 6 5 51 51 H 1.07999 * 119.94448 * 180.02562 * 27 5 4 52 52 H 1.08002 * 119.96764 * 179.97438 * 28 27 5 53 53 H 1.08000 * 120.03152 * 179.97438 * 29 28 27 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0461 1.2109 0.0000 4 6 3.4311 1.2847 0.0057 5 6 4.0560 2.5170 0.0109 6 6 5.5609 2.5980 0.0166 7 1 6.0372 1.6373 -0.1791 8 6 6.1189 3.7494 -0.8364 9 6 7.1506 3.9732 0.2819 10 1 7.3467 5.0244 0.4930 11 7 8.3763 3.1882 0.1153 12 6 9.5219 3.7969 -0.2500 13 8 9.5383 4.9946 -0.4403 14 6 10.7826 2.9893 -0.4220 15 6 11.9285 3.9147 -0.8359 16 8 13.1241 3.1490 -0.9984 17 6 14.2442 3.8246 -1.3668 18 6 14.1924 5.1955 -1.5734 19 6 15.3336 5.8808 -1.9428 20 6 16.5244 5.2000 -2.1168 21 6 17.7664 5.9493 -2.5254 22 8 18.1781 5.5171 -3.8238 23 14 17.4048 7.7764 -2.5647 24 6 16.5773 3.8328 -1.9172 25 6 15.4401 3.1438 -1.5426 26 6 6.1337 3.3317 1.2406 27 6 3.3020 3.6757 0.0110 28 6 1.9210 3.6047 0.0054 29 6 1.2915 2.3753 -0.0010 30 1 -0.3633 0.5140 0.8899 31 1 -0.3633 0.5138 -0.8900 32 1 -0.3634 -1.0276 0.0005 33 1 4.0207 0.3797 0.0062 34 1 6.5597 3.4216 -1.7778 35 1 5.4223 4.5786 -0.9601 36 1 8.3632 2.2303 0.2677 37 1 11.0325 2.5009 0.5199 38 1 10.6281 2.2345 -1.1929 39 1 11.6788 4.4034 -1.7777 40 1 12.0829 4.6693 -0.0647 41 1 13.2615 5.7270 -1.4419 42 1 15.2946 6.9486 -2.1000 43 1 18.5625 5.7519 -1.8074 44 1 18.9738 5.9581 -4.1512 45 1 18.6302 8.5289 -2.9354 46 1 16.3210 8.0587 -3.5399 47 1 17.5086 3.3033 -2.0541 48 1 15.4819 2.0758 -1.3872 49 1 5.4412 4.0466 1.6848 50 1 6.5851 2.6664 1.9766 51 1 3.7924 4.6380 0.0147 52 1 1.3342 4.5113 0.0059 53 1 0.2129 2.3204 -0.0050 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10812630_4549602.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:40:55 Heat of formation + Delta-G solvation = -58.102068 kcal Electronic energy + Delta-G solvation = -32846.238684 eV Core-core repulsion = 28230.182575 eV Total energy + Delta-G solvation = -4616.056109 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 384.182 amu Computer time = 1.67 seconds Orbital eigenvalues (eV) -41.72219 -41.29651 -40.85306 -39.76947 -39.05367 -37.88756 -37.36420 -34.56937 -33.33612 -32.18197 -31.97035 -31.51899 -30.85333 -28.24927 -26.88733 -26.67733 -26.09374 -25.24123 -23.66331 -23.50019 -22.34436 -22.07299 -21.52435 -20.25046 -19.53554 -18.77722 -18.54639 -17.90693 -17.46719 -17.26487 -17.22263 -16.97530 -16.82636 -16.77005 -16.67885 -16.13013 -15.79644 -15.69415 -15.59901 -15.34561 -14.76310 -14.66972 -14.46863 -14.41119 -14.35944 -14.10920 -13.98946 -13.90938 -13.69905 -13.47537 -13.26216 -13.20211 -12.91357 -12.79030 -12.67625 -12.42905 -12.29032 -12.11098 -12.01020 -11.73297 -11.68370 -11.65375 -11.57543 -11.25704 -11.05547 -10.47667 -10.11010 -10.03655 -9.75165 -9.21125 -9.16302 -4.94346 0.27400 0.30927 0.32038 0.47004 1.29883 1.51540 1.57334 1.69828 1.92801 2.34464 2.48030 2.61624 2.73101 3.42496 3.47452 3.56824 3.69447 3.73158 3.78461 3.82454 3.87135 3.91414 3.91751 3.97604 4.04160 4.09563 4.18418 4.25842 4.27093 4.33307 4.33860 4.38272 4.41532 4.48223 4.54125 4.62702 4.65922 4.68987 4.70221 4.70383 4.78949 4.79169 4.87674 4.97014 4.97931 5.02691 5.09861 5.16550 5.18518 5.28124 5.33650 5.48135 5.50339 5.54153 5.70402 5.71244 5.82001 6.31965 6.42835 6.46980 6.60557 7.16542 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.340 6.340 3 C 0.109 3.891 4 C -0.166 4.166 5 C -0.034 4.034 6 C -0.069 4.069 7 H 0.110 0.890 8 C -0.141 4.141 9 C 0.117 3.883 10 H 0.089 0.911 11 N -0.699 5.699 12 C 0.523 3.477 13 O -0.582 6.582 14 C -0.132 4.132 15 C 0.072 3.928 16 O -0.320 6.320 17 C 0.123 3.877 18 C -0.210 4.210 19 C -0.084 4.084 20 C -0.124 4.124 21 C -0.077 4.077 22 O -0.559 6.559 23 Si 0.754 3.246 24 C -0.060 4.060 25 C -0.158 4.158 26 C -0.123 4.123 27 C -0.161 4.161 28 C -0.084 4.084 29 C -0.222 4.222 30 H 0.063 0.937 31 H 0.062 0.938 32 H 0.115 0.885 33 H 0.132 0.868 34 H 0.068 0.932 35 H 0.098 0.902 36 H 0.419 0.581 37 H 0.130 0.870 38 H 0.126 0.874 39 H 0.062 0.938 40 H 0.069 0.931 41 H 0.141 0.859 42 H 0.139 0.861 43 H 0.097 0.903 44 H 0.394 0.606 45 H -0.283 1.283 46 H -0.303 1.303 47 H 0.143 0.857 48 H 0.145 0.855 49 H 0.101 0.899 50 H 0.089 0.911 51 H 0.139 0.861 52 H 0.142 0.858 53 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.066 -1.818 4.171 4.997 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.254 6.254 3 C 0.064 3.936 4 C -0.184 4.184 5 C -0.034 4.034 6 C -0.087 4.087 7 H 0.129 0.871 8 C -0.180 4.180 9 C 0.011 3.989 10 H 0.107 0.893 11 N -0.350 5.350 12 C 0.310 3.690 13 O -0.462 6.462 14 C -0.172 4.172 15 C -0.004 4.004 16 O -0.234 6.234 17 C 0.078 3.922 18 C -0.228 4.228 19 C -0.101 4.101 20 C -0.124 4.124 21 C -0.186 4.186 22 O -0.369 6.369 23 Si 0.661 3.339 24 C -0.078 4.078 25 C -0.176 4.176 26 C -0.161 4.161 27 C -0.179 4.179 28 C -0.102 4.102 29 C -0.241 4.241 30 H 0.082 0.918 31 H 0.081 0.919 32 H 0.133 0.867 33 H 0.150 0.850 34 H 0.087 0.913 35 H 0.116 0.884 36 H 0.256 0.744 37 H 0.148 0.852 38 H 0.144 0.856 39 H 0.081 0.919 40 H 0.087 0.913 41 H 0.158 0.842 42 H 0.156 0.844 43 H 0.115 0.885 44 H 0.244 0.756 45 H -0.210 1.210 46 H -0.231 1.231 47 H 0.161 0.839 48 H 0.163 0.837 49 H 0.119 0.881 50 H 0.107 0.893 51 H 0.157 0.843 52 H 0.160 0.840 53 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges -2.559 -1.039 3.680 4.601 hybrid contribution 0.135 -0.426 -1.084 1.172 sum -2.424 -1.465 2.596 3.842 Atomic orbital electron populations 1.23291 0.76665 1.05372 1.02103 1.86040 1.23272 1.27316 1.88794 1.19303 0.92880 0.84627 0.96795 1.20515 0.91447 0.98903 1.07584 1.19635 0.95642 0.91795 0.96331 1.21633 0.89820 0.99586 0.97632 0.87149 1.23551 0.97951 0.98700 0.97764 1.21830 0.83504 0.96455 0.97118 0.89302 1.45542 1.07802 1.12474 1.69223 1.20632 0.85426 0.87640 0.75266 1.90741 1.86397 1.17017 1.52007 1.21434 0.89618 0.98945 1.07180 1.22470 0.82156 0.93915 1.01851 1.85953 1.16646 1.37442 1.83332 1.19160 0.86968 0.90884 0.95182 1.21393 1.00420 0.93557 1.07470 1.20977 0.91656 1.00052 0.97439 1.19400 0.94366 0.94783 1.03899 1.24876 0.97362 1.09747 0.86630 1.86551 1.50212 1.66842 1.33256 0.94226 0.77580 0.73062 0.89070 1.21011 0.98334 0.93272 0.95159 1.20682 0.90220 1.01392 1.05331 1.23359 0.96921 0.99839 0.95988 1.21175 0.93792 0.98800 1.04118 1.21241 0.95038 0.97535 0.96406 1.21486 1.00924 0.92443 1.09249 0.91822 0.91914 0.86687 0.84983 0.91342 0.88392 0.74383 0.85244 0.85623 0.91930 0.91278 0.84169 0.84400 0.88479 0.75553 1.21010 1.23073 0.83919 0.83706 0.88072 0.89278 0.84308 0.83971 0.84316 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 9.81 113.37 1.11 1.07 16 2 O -0.34 -1.76 10.50 -92.45 -0.97 -2.73 16 3 C 0.11 0.53 6.69 22.50 0.15 0.68 16 4 C -0.17 -0.53 9.65 22.36 0.22 -0.32 16 5 C -0.03 0.00 5.29 -19.88 -0.11 -0.11 16 6 C -0.07 0.29 3.86 -11.01 -0.04 0.25 16 7 H 0.11 -0.72 8.09 -2.39 -0.02 -0.74 16 8 C -0.14 0.42 7.25 31.12 0.23 0.64 16 9 C 0.12 -0.34 4.32 45.52 0.20 -0.14 16 10 H 0.09 0.12 7.46 -2.39 -0.02 0.10 16 11 N -0.70 3.29 5.26 -440.04 -2.32 0.97 16 12 C 0.52 0.13 7.83 87.66 0.69 0.81 16 13 O -0.58 -5.47 15.58 -3.04 -0.05 -5.51 16 14 C -0.13 0.59 6.07 29.85 0.18 0.77 16 15 C 0.07 0.09 4.03 71.98 0.29 0.38 16 16 O -0.32 -1.29 10.14 -92.42 -0.94 -2.22 16 17 C 0.12 0.69 6.69 22.51 0.15 0.84 16 18 C -0.21 -1.05 9.04 22.37 0.20 -0.84 16 19 C -0.08 -0.37 8.66 22.26 0.19 -0.17 16 20 C -0.12 -0.54 5.39 -19.85 -0.11 -0.65 16 21 C -0.08 -0.07 2.79 71.24 0.20 0.13 16 22 O -0.56 -1.95 12.81 -148.98 -1.91 -3.86 16 23 Si 0.75 -0.05 29.85 68.60 2.05 2.00 16 24 C -0.06 -0.24 9.68 22.25 0.22 -0.02 16 25 C -0.16 -0.68 9.99 22.36 0.22 -0.46 16 26 C -0.12 0.70 7.29 31.12 0.23 0.93 16 27 C -0.16 0.04 8.61 22.28 0.19 0.23 16 28 C -0.08 -0.03 10.04 22.25 0.22 0.19 16 29 C -0.22 -0.48 9.04 22.36 0.20 -0.28 16 30 H 0.06 -0.25 7.67 -2.39 -0.02 -0.27 16 31 H 0.06 -0.24 7.66 -2.39 -0.02 -0.26 16 32 H 0.11 -0.64 8.14 -2.39 -0.02 -0.66 16 33 H 0.13 0.19 8.05 -2.91 -0.02 0.17 16 34 H 0.07 -0.08 8.14 -2.39 -0.02 -0.10 16 35 H 0.10 -0.30 6.31 -2.39 -0.02 -0.32 16 36 H 0.42 -4.45 8.70 -92.71 -0.81 -5.26 16 37 H 0.13 -1.09 8.14 -2.39 -0.02 -1.11 16 38 H 0.13 -0.98 8.14 -2.39 -0.02 -1.00 16 39 H 0.06 0.19 7.61 -2.39 -0.02 0.18 16 40 H 0.07 0.14 7.63 -2.39 -0.02 0.12 16 41 H 0.14 0.41 6.30 -2.91 -0.02 0.39 16 42 H 0.14 0.18 4.86 -2.91 -0.01 0.17 16 43 H 0.10 -0.35 7.96 -2.39 -0.02 -0.37 16 44 H 0.39 -1.85 8.74 -74.06 -0.65 -2.50 16 45 H -0.28 -0.97 7.11 99.48 0.71 -0.27 16 46 H -0.30 -2.33 7.05 99.48 0.70 -1.63 16 47 H 0.14 0.13 8.06 -2.91 -0.02 0.10 16 48 H 0.15 0.16 8.06 -2.91 -0.02 0.14 16 49 H 0.10 -0.55 7.72 -2.39 -0.02 -0.57 16 50 H 0.09 -0.66 8.14 -2.39 -0.02 -0.68 16 51 H 0.14 -0.51 6.65 -2.91 -0.02 -0.53 16 52 H 0.14 -0.54 8.06 -2.91 -0.02 -0.56 16 53 H 0.14 -0.19 6.30 -2.91 -0.02 -0.21 16 Total: 0.00 -23.31 432.89 0.23 -23.08 By element: Atomic # 1 Polarization: -15.19 SS G_CDS: -0.47 Total: -15.66 kcal Atomic # 6 Polarization: -0.90 SS G_CDS: 4.83 Total: 3.93 kcal Atomic # 7 Polarization: 3.29 SS G_CDS: -2.32 Total: 0.97 kcal Atomic # 8 Polarization: -10.47 SS G_CDS: -3.86 Total: -14.33 kcal Atomic # 14 Polarization: -0.05 SS G_CDS: 2.05 Total: 2.00 kcal Total: -23.31 0.23 -23.08 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10812630_4549602.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -35.019 kcal (2) G-P(sol) polarization free energy of solvation -23.313 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -58.333 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.231 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.083 kcal (6) G-S(sol) free energy of system = (1) + (5) -58.102 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.67 seconds