Wall clock time and date at job start Sat Mar 6 2021 14:40:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35905 * 117.00140 * 2 1 4 4 C 1.38710 * 120.05218 * 179.97438 * 3 2 1 5 5 C 1.38168 * 119.93764 * 180.02562 * 4 3 2 6 6 C 1.50703 * 119.96766 * 179.97438 * 5 4 3 7 7 H 1.08998 * 112.85245 * 9.66777 * 6 5 4 8 8 C 1.53780 * 113.61060 * 140.86403 * 6 5 4 9 9 C 1.53958 * 87.02063 * 139.95330 * 8 6 5 10 10 H 1.09002 * 113.74356 * 220.05585 * 9 8 6 11 11 N 1.46499 * 113.53955 * 89.18640 * 9 8 6 12 12 C 1.34775 * 119.99914 * 107.50504 * 11 9 8 13 13 O 1.21276 * 120.00200 * 0.02562 * 12 11 9 14 14 C 1.50707 * 119.99571 * 179.97438 * 12 11 9 15 15 C 1.52999 * 109.46757 * 180.02562 * 14 12 11 16 16 O 1.42896 * 109.47073 * 179.97438 * 15 14 12 17 17 C 1.35900 * 116.99934 * 179.97438 * 16 15 14 18 18 C 1.38711 * 120.05516 * 179.72959 * 17 16 15 19 19 C 1.38167 * 119.94533 * 179.72635 * 18 17 16 20 20 C 1.50707 * 119.97450 * 180.27500 * 19 18 17 21 21 O 1.42900 * 109.46792 * 300.29477 * 20 19 18 22 22 Si 1.86294 * 109.46931 * 180.29676 * 20 19 18 23 23 C 1.38243 * 120.05476 * 0.56883 * 19 18 17 24 24 C 1.38288 * 120.10927 * 359.68777 * 23 19 18 25 25 C 1.38128 * 120.05644 * 0.03570 * 24 23 19 26 26 C 1.53776 * 113.61311 * 238.46693 * 6 5 4 27 27 C 1.38237 * 120.05838 * 359.97438 * 5 4 3 28 28 C 1.38290 * 120.11494 * 359.76939 * 27 5 4 29 29 C 1.38125 * 120.05209 * 0.51379 * 28 27 5 30 30 H 1.09001 * 109.47541 * 300.00453 * 1 2 3 31 31 H 1.09007 * 109.46731 * 60.00115 * 1 2 3 32 32 H 1.08997 * 109.47417 * 179.97438 * 1 2 3 33 33 H 1.07993 * 120.02856 * 0.04156 * 4 3 2 34 34 H 1.09005 * 113.61417 * 254.52669 * 8 6 5 35 35 H 1.08999 * 113.62110 * 25.43028 * 8 6 5 36 36 H 0.97004 * 119.99879 * 287.51001 * 11 9 8 37 37 H 1.09001 * 109.47038 * 300.00122 * 14 12 11 38 38 H 1.08997 * 109.46894 * 60.00364 * 14 12 11 39 39 H 1.08997 * 109.47573 * 300.00506 * 15 14 12 40 40 H 1.09004 * 109.47425 * 60.00088 * 15 14 12 41 41 H 1.08000 * 120.03163 * 359.97438 * 18 17 16 42 42 H 1.08995 * 109.46996 * 60.29636 * 20 19 18 43 43 H 0.96705 * 113.99447 * 179.97438 * 21 20 19 44 44 H 1.48499 * 110.00379 * 59.99909 * 22 20 19 45 45 H 1.48505 * 109.99842 * 181.31921 * 22 20 19 46 46 H 1.08000 * 119.94828 * 179.69794 * 23 19 18 47 47 H 1.07999 * 119.97028 * 180.02562 * 24 23 19 48 48 H 1.07999 * 120.02485 * 179.97438 * 25 24 23 49 49 H 1.09000 * 113.61883 * 334.57087 * 26 6 5 50 50 H 1.09006 * 113.61309 * 105.38783 * 26 6 5 51 51 H 1.08000 * 119.94608 * 180.02562 * 27 5 4 52 52 H 1.08004 * 119.97799 * 180.25141 * 28 27 5 53 53 H 1.08002 * 120.03152 * 179.74558 * 29 28 27 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4312 1.2847 0.0005 5 6 4.0560 2.5171 0.0011 6 6 5.5609 2.5980 0.0022 7 1 6.0369 1.6321 -0.1661 8 6 6.1178 3.7226 -0.8866 9 6 7.1510 3.9803 0.2253 10 1 7.3474 5.0372 0.4055 11 7 8.3764 3.1907 0.0798 12 6 9.5216 3.7885 -0.3045 13 8 9.5377 4.9801 -0.5295 14 6 10.7823 2.9763 -0.4536 15 6 11.9276 3.8891 -0.8960 16 8 13.1231 3.1192 -1.0368 17 6 14.2425 3.7836 -1.4273 18 6 15.4395 3.0991 -1.5785 19 6 16.5748 3.7758 -1.9811 20 6 17.8742 3.0317 -2.1516 21 8 18.2457 2.4313 -0.9092 22 14 19.2043 4.2200 -2.6894 23 6 16.5212 5.1361 -2.2219 24 6 15.3303 5.8217 -2.0668 25 6 14.1912 5.1487 -1.6700 26 6 6.1354 3.3669 1.2037 27 6 3.3020 3.6757 0.0005 28 6 1.9209 3.6048 -0.0054 29 6 1.2914 2.3753 0.0000 30 1 -0.3634 0.5139 0.8899 31 1 -0.3633 0.5139 -0.8901 32 1 -0.3634 -1.0276 -0.0005 33 1 4.0206 0.3798 0.0003 34 1 6.5574 3.3657 -1.8181 35 1 5.4211 4.5476 -1.0351 36 1 8.3636 2.2377 0.2601 37 1 11.0332 2.5162 0.5022 38 1 10.6272 2.1988 -1.2016 39 1 11.6769 4.3496 -1.8516 40 1 12.0826 4.6665 -0.1478 41 1 15.4831 2.0374 -1.3856 42 1 17.7523 2.2563 -2.9078 43 1 19.0745 1.9343 -0.9449 44 1 19.3802 5.2823 -1.6668 45 1 20.4833 3.4930 -2.8918 46 1 17.4109 5.6642 -2.5318 47 1 15.2910 6.8843 -2.2558 48 1 13.2615 5.6847 -1.5486 49 1 5.4435 4.0945 1.6279 50 1 6.5878 2.7232 1.9581 51 1 3.7923 4.6380 0.0005 52 1 1.3340 4.5114 -0.0099 53 1 0.2128 2.3203 -0.0004 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10812630_4549614.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:40:59 Heat of formation + Delta-G solvation = -58.771786 kcal Electronic energy + Delta-G solvation = -32884.837600 eV Core-core repulsion = 28268.752449 eV Total energy + Delta-G solvation = -4616.085150 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 384.182 amu Computer time = 1.65 seconds Orbital eigenvalues (eV) -41.72710 -41.30645 -40.86107 -39.77461 -39.03091 -37.88837 -37.44440 -34.58212 -33.25648 -32.60029 -32.08517 -31.05523 -30.66030 -28.24867 -27.12363 -26.69131 -26.34086 -25.03153 -23.66198 -23.58919 -22.42494 -22.03095 -21.45343 -20.25769 -19.22153 -18.76380 -18.56479 -17.91936 -17.48653 -17.29592 -17.23469 -17.10359 -16.94987 -16.78748 -16.68029 -16.14919 -15.83715 -15.79467 -15.65766 -15.37270 -14.76281 -14.55731 -14.50319 -14.44120 -14.33079 -14.09968 -13.99206 -13.89855 -13.50807 -13.43987 -13.27177 -13.19280 -12.93343 -12.91097 -12.68869 -12.35987 -12.29132 -12.11470 -12.01891 -11.81237 -11.68469 -11.65435 -11.58741 -11.26618 -11.07341 -10.57101 -10.12231 -9.89992 -9.75455 -9.27580 -9.16461 -4.90798 0.19276 0.31760 0.38820 0.46790 1.28812 1.49607 1.61482 1.69163 1.96300 2.34289 2.46623 2.62545 2.72807 3.36341 3.46581 3.55051 3.68319 3.72044 3.76269 3.84440 3.86979 3.89423 3.95531 3.99610 4.08991 4.10722 4.18171 4.23486 4.25792 4.26971 4.33751 4.35174 4.38069 4.48552 4.53828 4.61193 4.62784 4.67010 4.67941 4.70129 4.76387 4.78349 4.86674 4.97276 4.97545 5.02080 5.09458 5.15739 5.24597 5.33411 5.37375 5.44993 5.47718 5.53268 5.68954 5.69887 5.81805 6.32291 6.42656 6.45259 6.58390 7.14579 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.340 6.340 3 C 0.109 3.891 4 C -0.166 4.166 5 C -0.034 4.034 6 C -0.068 4.068 7 H 0.110 0.890 8 C -0.140 4.140 9 C 0.116 3.884 10 H 0.089 0.911 11 N -0.699 5.699 12 C 0.524 3.476 13 O -0.581 6.581 14 C -0.133 4.133 15 C 0.073 3.927 16 O -0.324 6.324 17 C 0.117 3.883 18 C -0.143 4.143 19 C -0.048 4.048 20 C -0.090 4.090 21 O -0.559 6.559 22 Si 0.771 3.229 23 C -0.159 4.159 24 C -0.075 4.075 25 C -0.212 4.212 26 C -0.124 4.124 27 C -0.161 4.161 28 C -0.084 4.084 29 C -0.222 4.222 30 H 0.063 0.937 31 H 0.062 0.938 32 H 0.115 0.885 33 H 0.132 0.868 34 H 0.069 0.931 35 H 0.098 0.902 36 H 0.418 0.582 37 H 0.126 0.874 38 H 0.127 0.873 39 H 0.068 0.932 40 H 0.064 0.936 41 H 0.128 0.872 42 H 0.097 0.903 43 H 0.396 0.604 44 H -0.298 1.298 45 H -0.284 1.284 46 H 0.146 0.854 47 H 0.155 0.845 48 H 0.139 0.861 49 H 0.101 0.899 50 H 0.088 0.912 51 H 0.139 0.861 52 H 0.143 0.857 53 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.823 -1.649 -1.805 3.734 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.254 6.254 3 C 0.064 3.936 4 C -0.185 4.185 5 C -0.034 4.034 6 C -0.087 4.087 7 H 0.128 0.872 8 C -0.178 4.178 9 C 0.011 3.989 10 H 0.107 0.893 11 N -0.350 5.350 12 C 0.311 3.689 13 O -0.461 6.461 14 C -0.172 4.172 15 C -0.002 4.002 16 O -0.238 6.238 17 C 0.072 3.928 18 C -0.161 4.161 19 C -0.048 4.048 20 C -0.198 4.198 21 O -0.369 6.369 22 Si 0.676 3.324 23 C -0.177 4.177 24 C -0.093 4.093 25 C -0.230 4.230 26 C -0.162 4.162 27 C -0.179 4.179 28 C -0.102 4.102 29 C -0.241 4.241 30 H 0.082 0.918 31 H 0.081 0.919 32 H 0.133 0.867 33 H 0.150 0.850 34 H 0.088 0.912 35 H 0.116 0.884 36 H 0.256 0.744 37 H 0.144 0.856 38 H 0.146 0.854 39 H 0.086 0.914 40 H 0.082 0.918 41 H 0.146 0.854 42 H 0.115 0.885 43 H 0.246 0.754 44 H -0.226 1.226 45 H -0.211 1.211 46 H 0.164 0.836 47 H 0.173 0.827 48 H 0.157 0.843 49 H 0.120 0.880 50 H 0.106 0.894 51 H 0.157 0.843 52 H 0.161 0.839 53 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges -2.567 -0.603 -1.538 3.053 hybrid contribution -0.246 -1.158 0.891 1.482 sum -2.813 -1.762 -0.647 3.382 Atomic orbital electron populations 1.23292 0.76658 1.05373 1.02110 1.86041 1.23279 1.27319 1.88794 1.19304 0.92869 0.84634 0.96793 1.20516 0.91460 0.98897 1.07603 1.19630 0.95616 0.91806 0.96354 1.21630 0.89844 0.99643 0.97550 0.87187 1.23573 0.97871 0.98776 0.97610 1.21878 0.83477 0.96384 0.97204 0.89305 1.45545 1.07864 1.13057 1.68572 1.20595 0.85372 0.87551 0.75366 1.90736 1.86363 1.17348 1.51646 1.21439 0.89727 0.99099 1.06984 1.22453 0.82071 0.93748 1.01933 1.85945 1.16797 1.38155 1.82939 1.19112 0.86697 0.91342 0.95652 1.20321 0.90076 1.00904 1.04826 1.19308 0.93479 0.93799 0.98187 1.25115 1.01014 1.04121 0.89550 1.86551 1.46085 1.71686 1.32553 0.94010 0.74606 0.77062 0.86734 1.21132 0.99319 0.93154 1.04088 1.21238 0.91143 1.01226 0.95654 1.21556 1.01211 0.93320 1.06940 1.23366 0.96959 0.99794 0.96075 1.21169 0.93796 0.98784 1.04103 1.21246 0.95030 0.97539 0.96390 1.21490 1.00929 0.92436 1.09233 0.91826 0.91892 0.86693 0.85017 0.91218 0.88373 0.74404 0.85640 0.85449 0.91408 0.91804 0.85382 0.88523 0.75380 1.22601 1.21068 0.83634 0.82724 0.84318 0.88029 0.89384 0.84301 0.83944 0.84297 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.04 9.81 113.37 1.11 1.07 16 2 O -0.34 -1.78 10.50 -92.48 -0.97 -2.76 16 3 C 0.11 0.54 6.69 22.51 0.15 0.69 16 4 C -0.17 -0.55 9.65 22.37 0.22 -0.34 16 5 C -0.03 -0.01 5.29 -19.88 -0.11 -0.11 16 6 C -0.07 0.28 3.85 -11.01 -0.04 0.24 16 7 H 0.11 -0.69 8.09 -2.39 -0.02 -0.71 16 8 C -0.14 0.41 7.27 31.18 0.23 0.63 16 9 C 0.12 -0.30 4.33 45.58 0.20 -0.11 16 10 H 0.09 0.15 7.46 -2.39 -0.02 0.13 16 11 N -0.70 2.95 5.26 -439.75 -2.31 0.64 16 12 C 0.52 0.43 7.83 87.66 0.69 1.11 16 13 O -0.58 -5.69 15.58 -3.02 -0.05 -5.73 16 14 C -0.13 0.46 6.07 29.85 0.18 0.64 16 15 C 0.07 0.16 4.03 71.98 0.29 0.45 16 16 O -0.32 -1.90 10.14 -92.42 -0.94 -2.84 16 17 C 0.12 0.84 6.69 22.50 0.15 0.99 16 18 C -0.14 -1.04 9.55 22.37 0.21 -0.83 16 19 C -0.05 -0.24 5.42 -19.88 -0.11 -0.34 16 20 C -0.09 -0.10 2.81 71.24 0.20 0.10 16 21 O -0.56 -2.18 12.74 -148.98 -1.90 -4.08 16 22 Si 0.77 -0.98 29.79 68.60 2.04 1.06 16 23 C -0.16 -0.43 8.67 22.28 0.19 -0.24 16 24 C -0.07 -0.17 10.04 22.26 0.22 0.05 16 25 C -0.21 -1.01 9.04 22.37 0.20 -0.81 16 26 C -0.12 0.66 7.29 31.12 0.23 0.89 16 27 C -0.16 0.04 8.53 22.28 0.19 0.23 16 28 C -0.08 -0.03 10.04 22.26 0.22 0.19 16 29 C -0.22 -0.48 9.04 22.37 0.20 -0.28 16 30 H 0.06 -0.25 7.66 -2.39 -0.02 -0.27 16 31 H 0.06 -0.24 7.66 -2.38 -0.02 -0.26 16 32 H 0.11 -0.64 8.14 -2.39 -0.02 -0.66 16 33 H 0.13 0.21 8.05 -2.91 -0.02 0.19 16 34 H 0.07 -0.10 8.14 -2.38 -0.02 -0.12 16 35 H 0.10 -0.30 6.39 -2.39 -0.02 -0.32 16 36 H 0.42 -4.21 8.70 -92.71 -0.81 -5.02 16 37 H 0.13 -0.85 8.14 -2.39 -0.02 -0.87 16 38 H 0.13 -0.91 8.14 -2.39 -0.02 -0.93 16 39 H 0.07 0.21 7.62 -2.39 -0.02 0.19 16 40 H 0.06 0.24 7.62 -2.39 -0.02 0.22 16 41 H 0.13 0.90 8.06 -2.91 -0.02 0.88 16 42 H 0.10 -0.28 7.96 -2.39 -0.02 -0.30 16 43 H 0.40 -1.83 8.74 -74.05 -0.65 -2.48 16 44 H -0.30 -1.80 7.11 99.48 0.71 -1.09 16 45 H -0.28 -0.66 7.11 99.48 0.71 0.04 16 46 H 0.15 -0.26 4.87 -2.91 -0.01 -0.28 16 47 H 0.16 -0.48 8.06 -2.91 -0.02 -0.50 16 48 H 0.14 0.39 6.30 -2.91 -0.02 0.37 16 49 H 0.10 -0.53 7.64 -2.39 -0.02 -0.54 16 50 H 0.09 -0.60 8.14 -2.38 -0.02 -0.62 16 51 H 0.14 -0.51 6.72 -2.91 -0.02 -0.53 16 52 H 0.14 -0.54 8.06 -2.91 -0.02 -0.57 16 53 H 0.14 -0.19 6.30 -2.91 -0.02 -0.21 16 Total: 0.00 -23.99 432.82 0.24 -23.74 By element: Atomic # 1 Polarization: -13.80 SS G_CDS: -0.46 Total: -14.26 kcal Atomic # 6 Polarization: -0.60 SS G_CDS: 4.83 Total: 4.23 kcal Atomic # 7 Polarization: 2.95 SS G_CDS: -2.31 Total: 0.64 kcal Atomic # 8 Polarization: -11.55 SS G_CDS: -3.85 Total: -15.41 kcal Atomic # 14 Polarization: -0.98 SS G_CDS: 2.04 Total: 1.06 kcal Total: -23.99 0.24 -23.74 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10812630_4549614.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -35.028 kcal (2) G-P(sol) polarization free energy of solvation -23.988 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -59.016 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.244 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.744 kcal (6) G-S(sol) free energy of system = (1) + (5) -58.772 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.65 seconds