Wall clock time and date at job start Sat Mar 6 2021 14:41:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35904 * 117.00131 * 2 1 4 4 C 1.38705 * 120.05924 * 180.25191 * 3 2 1 5 5 C 1.38173 * 119.94203 * 180.25551 * 4 3 2 6 6 C 1.50701 * 119.96834 * 179.74471 * 5 4 3 7 7 H 1.09003 * 112.85518 * 9.68962 * 6 5 4 8 8 C 1.53787 * 113.61355 * 140.88801 * 6 5 4 9 9 C 1.53957 * 87.01921 * 139.94984 * 8 6 5 10 10 H 1.08999 * 113.74064 * 220.05519 * 9 8 6 11 11 N 1.46495 * 113.53656 * 89.18914 * 9 8 6 12 12 C 1.34778 * 120.00238 * 107.50639 * 11 9 8 13 13 O 1.21284 * 119.99601 * 359.97438 * 12 11 9 14 14 C 1.50696 * 120.00312 * 179.97438 * 12 11 9 15 15 O 1.42901 * 109.47055 * 179.97438 * 14 12 11 16 16 C 1.35900 * 116.99593 * 179.97438 * 15 14 12 17 17 C 1.38721 * 120.05268 * 179.72586 * 16 15 14 18 18 N 1.48001 * 120.02552 * 0.02562 * 17 16 15 19 19 O 1.21804 * 119.99588 * 179.97438 * 18 17 16 20 20 O 1.21794 * 120.00370 * 0.02562 * 18 17 16 21 21 C 1.38166 * 119.94293 * 179.79046 * 17 16 15 22 22 C 1.38245 * 120.05408 * 0.48811 * 21 17 16 23 23 C 1.50703 * 119.94252 * 179.72251 * 22 21 17 24 24 O 1.42898 * 109.47003 * 300.01954 * 23 22 21 25 25 Si 1.86301 * 109.47023 * 180.02562 * 23 22 21 26 26 C 1.38280 * 120.11253 * 359.74218 * 22 21 17 27 27 C 1.38123 * 120.05695 * 0.02562 * 26 22 21 28 28 C 1.53781 * 87.11318 * 334.63846 * 9 8 6 29 29 C 1.38232 * 120.05823 * 359.76822 * 5 4 3 30 30 C 1.38294 * 120.11124 * 359.97438 * 29 5 4 31 31 C 1.38122 * 120.05499 * 359.97438 * 30 29 5 32 32 H 1.09000 * 109.46950 * 300.00206 * 1 2 3 33 33 H 1.08994 * 109.46928 * 60.00366 * 1 2 3 34 34 H 1.08999 * 109.46959 * 179.97438 * 1 2 3 35 35 H 1.07997 * 120.03160 * 0.02562 * 4 3 2 36 36 H 1.08997 * 113.61249 * 254.53128 * 8 6 5 37 37 H 1.09000 * 113.60883 * 25.43270 * 8 6 5 38 38 H 0.97000 * 120.00206 * 287.50309 * 11 9 8 39 39 H 1.08996 * 109.47208 * 299.99709 * 14 12 11 40 40 H 1.09001 * 109.46759 * 59.99999 * 14 12 11 41 41 H 1.07995 * 119.96932 * 180.22717 * 21 17 16 42 42 H 1.08996 * 109.47001 * 60.01657 * 23 22 21 43 43 H 0.96696 * 114.00316 * 300.00363 * 24 23 22 44 44 H 1.48497 * 109.99602 * 179.97438 * 25 23 22 45 45 H 1.48497 * 109.99891 * 301.31542 * 25 23 22 46 46 H 1.08007 * 119.97016 * 180.02562 * 26 22 21 47 47 H 1.07999 * 120.02806 * 179.97438 * 27 26 22 48 48 H 1.09005 * 113.61002 * 270.81340 * 28 9 8 49 49 H 1.08996 * 113.69227 * 139.92513 * 28 9 8 50 50 H 1.08003 * 119.94745 * 179.97438 * 29 5 4 51 51 H 1.08000 * 119.97251 * 179.97438 * 30 29 5 52 52 H 1.08002 * 120.02504 * 180.02562 * 31 30 29 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4311 1.2849 -0.0053 5 6 4.0559 2.5173 0.0001 6 6 5.5607 2.5983 0.0002 7 1 6.0367 1.6332 -0.1733 8 6 6.1169 3.7271 -0.8839 9 6 7.1510 3.9796 0.2284 10 1 7.3475 5.0356 0.4134 11 7 8.3763 3.1908 0.0779 12 6 9.5211 3.7904 -0.3045 13 8 9.5368 4.9830 -0.5246 14 6 10.7817 2.9791 -0.4588 15 8 11.8507 3.8336 -0.8700 16 6 13.0664 3.2551 -1.0552 17 6 14.1475 4.0245 -1.4598 18 7 13.9782 5.4767 -1.6897 19 8 14.9279 6.1518 -2.0445 20 8 12.8896 5.9968 -1.5232 21 6 15.3835 3.4348 -1.6432 22 6 15.5409 2.0774 -1.4337 23 6 16.8887 1.4357 -1.6406 24 8 17.3050 1.6278 -2.9940 25 14 16.7699 -0.3883 -1.2804 26 6 14.4637 1.3074 -1.0350 27 6 13.2272 1.8930 -0.8456 28 6 6.1365 3.3614 1.2048 29 6 3.3019 3.6758 0.0058 30 6 1.9208 3.6048 0.0057 31 6 1.2914 2.3753 -0.0007 32 1 -0.3633 0.5139 0.8900 33 1 -0.3633 0.5138 -0.8900 34 1 -0.3633 -1.0277 -0.0005 35 1 4.0207 0.3801 -0.0098 36 1 6.5555 3.3748 -1.8174 37 1 5.4199 4.5528 -1.0275 38 1 8.3637 2.2369 0.2536 39 1 11.0336 2.5145 0.4945 40 1 10.6259 2.2052 -1.2104 41 1 16.2262 4.0340 -1.9546 42 1 17.6154 1.8923 -0.9687 43 1 16.7038 1.2463 -3.6484 44 1 18.0925 -1.0328 -1.4814 45 1 16.3072 -0.6015 0.1144 46 1 14.5894 0.2472 -0.8715 47 1 12.3861 1.2911 -0.5346 48 1 5.4449 4.0870 1.6331 49 1 6.5896 2.7142 1.9557 50 1 3.7921 4.6382 0.0104 51 1 1.3339 4.5113 0.0107 52 1 0.2127 2.3204 -0.0012 There are 76 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 76 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10812630_4549638.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:41:31 Heat of formation + Delta-G solvation = -47.184494 kcal Electronic energy + Delta-G solvation = -38070.173523 eV Core-core repulsion = 32779.112018 eV Total energy + Delta-G solvation = -5291.061504 eV No. of doubly occupied orbitals = 76 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 415.160 amu Computer time = 1.94 seconds Orbital eigenvalues (eV) -43.28722 -41.87264 -41.49958 -40.82853 -39.92442 -39.17837 -37.85122 -37.58763 -37.34342 -34.61563 -33.46631 -32.28555 -32.11424 -31.05961 -29.71152 -28.22448 -27.81763 -26.67856 -26.62604 -25.86356 -24.13432 -23.57245 -22.88798 -22.36907 -21.89206 -20.54460 -20.27023 -19.76878 -19.14350 -18.78908 -18.63162 -18.40750 -18.09660 -17.57081 -17.25840 -17.19913 -16.90518 -16.77543 -16.66061 -16.33603 -16.12652 -15.93717 -15.68649 -15.55941 -15.37948 -14.96055 -14.71660 -14.43441 -14.31462 -14.06420 -13.99010 -13.88850 -13.73345 -13.45734 -13.25732 -13.20859 -13.17172 -12.70100 -12.68142 -12.36135 -12.28864 -12.26878 -12.24147 -12.18749 -12.09684 -11.93943 -11.63316 -11.56626 -11.25123 -11.02384 -10.82953 -10.55958 -10.14134 -9.78084 -9.73202 -9.14593 -4.99075 -1.30841 -0.23482 0.16343 0.33700 0.36159 0.48711 1.20796 1.27851 1.45522 1.64580 2.02850 2.06154 2.31905 2.36266 2.74611 3.12678 3.25288 3.40021 3.48522 3.51442 3.61286 3.70793 3.72089 3.76190 3.80610 3.88909 3.94195 3.97710 4.05193 4.11150 4.20111 4.28898 4.29809 4.35210 4.36428 4.40107 4.51774 4.55920 4.64105 4.64175 4.68165 4.71999 4.80728 4.84820 4.86591 4.98835 5.04469 5.08151 5.11778 5.16376 5.20002 5.35341 5.48601 5.53680 5.71639 5.77389 5.83233 6.42248 6.44361 6.46302 6.73775 7.17203 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.339 6.339 3 C 0.109 3.891 4 C -0.162 4.162 5 C -0.034 4.034 6 C -0.064 4.064 7 H 0.118 0.882 8 C -0.142 4.142 9 C 0.117 3.883 10 H 0.082 0.918 11 N -0.690 5.690 12 C 0.510 3.490 13 O -0.565 6.565 14 C 0.024 3.976 15 O -0.292 6.292 16 C 0.194 3.806 17 C -0.105 4.105 18 N 0.035 4.965 19 O -0.205 6.205 20 O -0.173 6.173 21 C -0.004 4.004 22 C -0.150 4.150 23 C -0.083 4.083 24 O -0.558 6.558 25 Si 0.799 3.201 26 C -0.005 4.005 27 C -0.188 4.188 28 C -0.122 4.122 29 C -0.162 4.162 30 C -0.086 4.086 31 C -0.223 4.223 32 H 0.062 0.938 33 H 0.061 0.939 34 H 0.116 0.884 35 H 0.137 0.863 36 H 0.071 0.929 37 H 0.093 0.907 38 H 0.423 0.577 39 H 0.145 0.855 40 H 0.147 0.853 41 H 0.149 0.851 42 H 0.109 0.891 43 H 0.398 0.602 44 H -0.306 1.306 45 H -0.263 1.263 46 H 0.189 0.811 47 H 0.208 0.792 48 H 0.098 0.902 49 H 0.094 0.906 50 H 0.136 0.864 51 H 0.140 0.860 52 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.404 -14.730 2.447 15.879 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.253 6.253 3 C 0.064 3.936 4 C -0.181 4.181 5 C -0.034 4.034 6 C -0.082 4.082 7 H 0.136 0.864 8 C -0.181 4.181 9 C 0.011 3.989 10 H 0.100 0.900 11 N -0.345 5.345 12 C 0.296 3.704 13 O -0.442 6.442 14 C -0.052 4.052 15 O -0.202 6.202 16 C 0.144 3.856 17 C -0.190 4.190 18 N 0.545 4.455 19 O -0.412 6.412 20 O -0.387 6.387 21 C -0.023 4.023 22 C -0.152 4.152 23 C -0.191 4.191 24 O -0.366 6.366 25 Si 0.703 3.297 26 C -0.022 4.022 27 C -0.206 4.206 28 C -0.160 4.160 29 C -0.180 4.180 30 C -0.104 4.104 31 C -0.242 4.242 32 H 0.081 0.919 33 H 0.080 0.920 34 H 0.134 0.866 35 H 0.155 0.845 36 H 0.090 0.910 37 H 0.111 0.889 38 H 0.262 0.738 39 H 0.162 0.838 40 H 0.165 0.835 41 H 0.167 0.833 42 H 0.127 0.873 43 H 0.248 0.752 44 H -0.234 1.234 45 H -0.189 1.189 46 H 0.206 0.794 47 H 0.224 0.776 48 H 0.116 0.884 49 H 0.112 0.888 50 H 0.154 0.846 51 H 0.157 0.843 52 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges -4.534 -14.845 3.146 15.838 hybrid contribution -0.193 1.518 0.004 1.530 sum -4.728 -13.327 3.150 14.487 Atomic orbital electron populations 1.23284 0.76733 1.05376 1.02034 1.86037 1.23190 1.27256 1.88792 1.19311 0.92975 0.84537 0.96791 1.20522 0.91322 0.98921 1.07311 1.19643 0.95754 0.91717 0.96326 1.21643 0.89670 0.99735 0.97189 0.86351 1.23582 0.97826 0.98890 0.97774 1.21854 0.83342 0.96230 0.97444 0.90015 1.45287 1.07171 1.13030 1.68970 1.20524 0.85429 0.87838 0.76602 1.90855 1.85804 1.17628 1.49930 1.23131 0.83264 0.92713 1.06118 1.86472 1.15639 1.37455 1.80629 1.18967 0.83587 0.92484 0.90530 1.20871 0.97696 0.78970 1.21491 1.43903 0.99968 1.04348 0.97330 1.94505 1.32825 1.63326 1.50521 1.94677 1.13149 1.75522 1.55357 1.20829 0.93635 0.96058 0.91797 1.20454 0.98403 0.91767 1.04539 1.25482 0.92789 1.13421 0.87378 1.86528 1.52706 1.82565 1.14843 0.93801 0.82618 0.71346 0.81958 1.21728 0.90055 1.01756 0.88688 1.21822 1.01941 0.90158 1.06688 1.23359 0.96706 0.99789 0.96137 1.21168 0.93793 0.98881 1.04170 1.21225 0.95086 0.97516 0.96576 1.21479 1.00893 0.92498 1.09285 0.91916 0.92002 0.86624 0.84523 0.91024 0.88853 0.73831 0.83794 0.83530 0.83336 0.87331 0.75193 1.23450 1.18917 0.79418 0.77555 0.88397 0.88762 0.84617 0.84259 0.84460 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.07 9.81 113.37 1.11 1.05 16 2 O -0.34 -1.26 10.50 -92.47 -0.97 -2.24 16 3 C 0.11 0.38 6.69 22.51 0.15 0.53 16 4 C -0.16 -0.20 9.65 22.37 0.22 0.02 16 5 C -0.03 0.05 5.29 -19.88 -0.11 -0.06 16 6 C -0.06 0.42 3.85 -11.01 -0.04 0.38 16 7 H 0.12 -1.22 8.09 -2.39 -0.02 -1.24 16 8 C -0.14 0.56 7.27 31.18 0.23 0.78 16 9 C 0.12 -0.43 4.33 45.58 0.20 -0.23 16 10 H 0.08 0.20 7.46 -2.39 -0.02 0.19 16 11 N -0.69 5.02 5.26 -439.76 -2.31 2.70 16 12 C 0.51 0.05 7.91 87.66 0.69 0.74 16 13 O -0.57 -8.04 16.10 16.00 0.26 -7.78 16 14 C 0.02 -0.21 5.22 71.23 0.37 0.17 16 15 O -0.29 -1.10 7.68 -63.40 -0.49 -1.59 16 16 C 0.19 -0.01 6.67 22.51 0.15 0.14 16 17 C -0.10 -0.71 6.87 36.48 0.25 -0.46 16 18 N 0.03 0.58 4.45 -46.24 -0.21 0.37 16 19 O -0.20 -3.86 18.45 18.88 0.35 -3.52 16 20 O -0.17 -3.74 17.24 25.62 0.44 -3.30 16 21 C 0.00 -0.01 9.11 22.25 0.20 0.20 16 22 C -0.15 0.89 5.39 -19.85 -0.11 0.79 16 23 C -0.08 0.52 2.82 71.24 0.20 0.72 16 24 O -0.56 2.00 12.77 -148.98 -1.90 0.10 16 25 Si 0.80 -8.35 29.78 68.60 2.04 -6.31 16 26 C 0.00 0.06 8.66 22.25 0.19 0.25 16 27 C -0.19 2.17 9.04 22.36 0.20 2.37 16 28 C -0.12 0.88 7.29 31.12 0.23 1.11 16 29 C -0.16 0.12 8.53 22.28 0.19 0.31 16 30 C -0.09 -0.01 10.04 22.26 0.22 0.22 16 31 C -0.22 -0.33 9.04 22.37 0.20 -0.13 16 32 H 0.06 -0.30 7.66 -2.39 -0.02 -0.32 16 33 H 0.06 -0.28 7.66 -2.39 -0.02 -0.30 16 34 H 0.12 -0.77 8.14 -2.39 -0.02 -0.79 16 35 H 0.14 -0.19 8.05 -2.91 -0.02 -0.22 16 36 H 0.07 -0.20 8.14 -2.39 -0.02 -0.21 16 37 H 0.09 -0.27 6.39 -2.39 -0.02 -0.29 16 38 H 0.42 -6.73 8.70 -92.71 -0.81 -7.54 16 39 H 0.14 -2.46 7.66 -2.39 -0.02 -2.47 16 40 H 0.15 -2.56 7.66 -2.39 -0.02 -2.58 16 41 H 0.15 0.60 7.61 -2.91 -0.02 0.58 16 42 H 0.11 -0.46 7.96 -2.39 -0.02 -0.48 16 43 H 0.40 -4.89 8.70 -74.06 -0.64 -5.54 16 44 H -0.31 0.17 7.11 99.48 0.71 0.87 16 45 H -0.26 2.25 7.11 99.48 0.71 2.95 16 46 H 0.19 -3.76 4.87 -2.91 -0.01 -3.77 16 47 H 0.21 -4.52 6.30 -2.91 -0.02 -4.54 16 48 H 0.10 -0.60 7.64 -2.38 -0.02 -0.61 16 49 H 0.09 -0.94 8.14 -2.39 -0.02 -0.96 16 50 H 0.14 -0.48 6.72 -2.91 -0.02 -0.50 16 51 H 0.14 -0.50 8.06 -2.91 -0.02 -0.52 16 52 H 0.14 -0.25 6.30 -2.91 -0.02 -0.27 16 Total: 0.00 -42.77 437.84 1.57 -41.20 By element: Atomic # 1 Polarization: -28.16 SS G_CDS: -0.40 Total: -28.56 kcal Atomic # 6 Polarization: 4.15 SS G_CDS: 4.75 Total: 8.90 kcal Atomic # 7 Polarization: 5.60 SS G_CDS: -2.52 Total: 3.08 kcal Atomic # 8 Polarization: -16.01 SS G_CDS: -2.31 Total: -18.32 kcal Atomic # 14 Polarization: -8.35 SS G_CDS: 2.04 Total: -6.31 kcal Total: -42.77 1.57 -41.20 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10812630_4549638.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -5.982 kcal (2) G-P(sol) polarization free energy of solvation -42.772 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -48.754 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.569 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.203 kcal (6) G-S(sol) free energy of system = (1) + (5) -47.184 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.94 seconds