Wall clock time and date at job start Sat Mar 6 2021 14:41:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42907 * 1 3 3 C 1.35897 * 116.99627 * 2 1 4 4 C 1.38713 * 120.05343 * 179.97438 * 3 2 1 5 5 C 1.38164 * 119.94403 * 179.97438 * 4 3 2 6 6 C 1.50701 * 119.97099 * 180.02562 * 5 4 3 7 7 H 1.09002 * 112.85047 * 350.33188 * 6 5 4 8 8 C 1.53781 * 113.61772 * 121.52902 * 6 5 4 9 9 C 1.53777 * 87.08336 * 140.06093 * 8 6 5 10 10 H 1.08996 * 113.61474 * 220.01758 * 9 8 6 11 11 N 1.46499 * 113.61160 * 89.20358 * 9 8 6 12 12 C 1.34770 * 120.00157 * 155.00230 * 11 9 8 13 13 O 1.21278 * 120.00302 * 359.97438 * 12 11 9 14 14 C 1.50707 * 120.00237 * 179.97438 * 12 11 9 15 15 F 1.39905 * 109.46777 * 299.99920 * 14 12 11 16 16 F 1.39898 * 109.46897 * 59.99685 * 14 12 11 17 17 O 1.42894 * 109.47021 * 179.97438 * 14 12 11 18 18 C 1.35904 * 116.99627 * 179.97438 * 17 14 12 19 19 C 1.38729 * 120.05829 * 359.72663 * 18 17 14 20 20 C 1.38146 * 119.94659 * 179.69809 * 19 18 17 21 21 C 1.38274 * 120.05251 * 0.59860 * 20 19 18 22 22 C 1.50699 * 119.94316 * 179.70372 * 21 20 19 23 23 O 1.42896 * 109.46690 * 244.97280 * 22 21 20 24 24 Si 1.86293 * 109.47037 * 4.97119 * 22 21 20 25 25 C 1.38269 * 120.10754 * 359.67311 * 21 20 19 26 26 C 1.38138 * 120.06031 * 0.02767 * 25 21 20 27 27 C 1.53775 * 87.07992 * 334.56762 * 9 8 6 28 28 C 1.38239 * 120.05836 * 0.27269 * 5 4 3 29 29 C 1.38298 * 120.10723 * 359.45498 * 28 5 4 30 30 C 1.38121 * 120.05574 * 0.54564 * 29 28 5 31 31 H 1.09000 * 109.46958 * 60.00447 * 1 2 3 32 32 H 1.08996 * 109.47049 * 179.97438 * 1 2 3 33 33 H 1.08997 * 109.47176 * 300.00266 * 1 2 3 34 34 H 1.08004 * 120.02797 * 359.95771 * 4 3 2 35 35 H 1.08997 * 113.61673 * 254.61641 * 8 6 5 36 36 H 1.09005 * 113.61396 * 25.51470 * 8 6 5 37 37 H 0.97006 * 119.99863 * 334.99879 * 11 9 8 38 38 H 1.08001 * 120.02371 * 359.97438 * 19 18 17 39 39 H 1.07999 * 119.97684 * 180.27521 * 20 19 18 40 40 H 1.08997 * 109.47353 * 124.97474 * 22 21 20 41 41 H 0.96703 * 114.00134 * 179.97438 * 23 22 21 42 42 H 1.48498 * 110.00323 * 300.00333 * 24 22 21 43 43 H 1.48507 * 110.00272 * 61.32632 * 24 22 21 44 44 H 1.08001 * 119.96725 * 180.02562 * 25 21 20 45 45 H 1.08000 * 120.03128 * 179.97438 * 26 25 21 46 46 H 1.08993 * 113.61636 * 270.87622 * 27 9 8 47 47 H 1.09008 * 113.61006 * 139.97865 * 27 9 8 48 48 H 1.07994 * 119.94856 * 179.70844 * 28 5 4 49 49 H 1.08006 * 119.97146 * 180.29709 * 29 28 5 50 50 H 1.07996 * 120.02363 * 179.70798 * 30 29 28 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4311 1.2849 0.0005 5 6 4.0559 2.5172 0.0000 6 6 5.5608 2.5982 0.0000 7 1 6.0367 1.6323 0.1691 8 6 6.1363 3.3666 -1.2013 9 6 7.1524 3.9788 -0.2228 10 1 7.3489 5.0358 -0.4019 11 7 8.3778 3.1888 -0.0788 12 6 9.5232 3.7859 0.3056 13 8 9.5398 4.9773 0.5319 14 6 10.7836 2.9732 0.4542 15 9 10.5843 1.9749 1.4139 16 9 11.1053 2.3831 -0.7727 17 8 11.8537 3.8252 0.8676 18 6 13.0692 3.2451 1.0494 19 6 13.2273 1.8828 0.8399 20 6 14.4652 1.2966 1.0193 21 6 15.5435 2.0642 1.4194 22 6 16.8913 1.4210 1.6209 23 8 17.2579 1.5052 2.9995 24 14 16.8082 -0.3682 1.1087 25 6 15.3872 3.4211 1.6344 26 6 14.1527 4.0132 1.4503 27 6 6.1188 3.7237 0.8869 28 6 3.3019 3.6758 0.0046 29 6 1.9208 3.6047 -0.0016 30 6 1.2914 2.3753 -0.0010 31 1 -0.3633 0.5138 -0.8900 32 1 -0.3633 -1.0276 -0.0005 33 1 -0.3633 0.5139 0.8899 34 1 4.0207 0.3799 0.0016 35 1 6.5893 2.7227 -1.9551 36 1 5.4452 4.0950 -1.6255 37 1 8.3647 2.2360 -0.2602 38 1 12.3842 1.2820 0.5323 39 1 14.5899 0.2370 0.8520 40 1 17.6351 1.9383 1.0149 41 1 18.1166 1.1097 3.2030 42 1 15.7976 -1.0847 1.9275 43 1 16.4590 -0.4687 -0.3313 44 1 16.2310 4.0186 1.9465 45 1 14.0311 5.0730 1.6188 46 1 5.4230 4.5497 1.0337 47 1 6.5579 3.3680 1.8191 48 1 3.7922 4.6381 0.0090 49 1 1.3339 4.5114 -0.0028 50 1 0.2128 2.3204 -0.0011 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10812630_4549640.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:41:36 Heat of formation + Delta-G solvation = -140.196111 kcal Electronic energy + Delta-G solvation = -37443.337707 eV Core-core repulsion = 32040.351401 eV Total energy + Delta-G solvation = -5402.986306 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 406.147 amu Computer time = 1.87 seconds Orbital eigenvalues (eV) -51.01474 -48.98815 -41.90893 -41.48394 -41.03972 -39.96491 -39.23890 -37.97339 -37.30316 -34.99812 -32.64499 -32.28629 -32.14804 -31.06198 -29.20195 -28.25473 -26.77916 -26.55295 -25.87624 -24.66836 -23.62395 -23.02029 -22.49287 -22.35113 -20.78875 -20.56524 -19.81223 -19.77861 -18.83085 -18.39313 -18.19662 -17.48746 -17.25929 -17.11141 -16.92605 -16.69739 -16.62709 -16.50738 -16.45764 -16.03975 -15.85115 -15.77830 -15.51983 -15.41768 -15.28647 -15.23611 -14.91585 -14.54561 -14.48849 -14.42523 -14.38477 -14.11243 -14.02905 -13.74038 -13.56406 -13.33669 -13.28214 -13.25835 -12.71855 -12.60317 -12.37842 -12.21788 -12.19460 -12.00627 -11.78339 -11.67709 -11.59326 -11.37497 -10.55397 -10.36335 -10.31678 -9.77660 -9.70294 -9.17652 -4.97370 -0.12600 -0.01554 0.29832 0.34682 0.45921 0.53234 1.27933 1.55726 1.61793 1.88864 1.94555 2.29663 2.33063 2.65807 2.71049 3.09965 3.27371 3.32826 3.41058 3.51104 3.54817 3.66469 3.82961 3.84349 3.88790 3.93092 4.03801 4.08285 4.16295 4.24128 4.25011 4.32390 4.35436 4.42693 4.45403 4.50992 4.55569 4.66960 4.67239 4.69325 4.73292 4.77019 4.86250 4.87644 4.95758 4.96607 5.05759 5.20025 5.23814 5.29742 5.32467 5.48533 5.64749 5.68181 5.76160 5.80885 6.36482 6.41458 6.91514 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.341 6.341 3 C 0.108 3.892 4 C -0.167 4.167 5 C -0.034 4.034 6 C -0.073 4.073 7 H 0.107 0.893 8 C -0.120 4.120 9 C 0.111 3.889 10 H 0.107 0.893 11 N -0.669 5.669 12 C 0.522 3.478 13 O -0.502 6.502 14 C 0.432 3.568 15 F -0.173 7.173 16 F -0.172 7.172 17 O -0.300 6.300 18 C 0.086 3.914 19 C -0.194 4.194 20 C -0.100 4.100 21 C -0.109 4.109 22 C -0.073 4.073 23 O -0.563 6.563 24 Si 0.769 3.231 25 C -0.053 4.053 26 C -0.129 4.129 27 C -0.138 4.138 28 C -0.158 4.158 29 C -0.083 4.083 30 C -0.222 4.222 31 H 0.064 0.936 32 H 0.114 0.886 33 H 0.063 0.937 34 H 0.129 0.871 35 H 0.090 0.910 36 H 0.115 0.885 37 H 0.422 0.578 38 H 0.138 0.862 39 H 0.126 0.874 40 H 0.103 0.897 41 H 0.405 0.595 42 H -0.298 1.298 43 H -0.289 1.289 44 H 0.164 0.836 45 H 0.156 0.844 46 H 0.111 0.889 47 H 0.071 0.929 48 H 0.144 0.856 49 H 0.144 0.856 50 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.424 -1.770 -1.778 2.544 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.255 6.255 3 C 0.063 3.937 4 C -0.185 4.185 5 C -0.034 4.034 6 C -0.091 4.091 7 H 0.125 0.875 8 C -0.158 4.158 9 C 0.008 3.992 10 H 0.125 0.875 11 N -0.323 5.323 12 C 0.300 3.700 13 O -0.375 6.375 14 C 0.354 3.646 15 F -0.155 7.155 16 F -0.154 7.154 17 O -0.217 6.217 18 C 0.044 3.956 19 C -0.212 4.212 20 C -0.118 4.118 21 C -0.109 4.109 22 C -0.183 4.183 23 O -0.373 6.373 24 Si 0.676 3.324 25 C -0.071 4.071 26 C -0.147 4.147 27 C -0.177 4.177 28 C -0.176 4.176 29 C -0.101 4.101 30 C -0.240 4.240 31 H 0.082 0.918 32 H 0.133 0.867 33 H 0.081 0.919 34 H 0.147 0.853 35 H 0.109 0.891 36 H 0.133 0.867 37 H 0.260 0.740 38 H 0.155 0.845 39 H 0.144 0.856 40 H 0.120 0.880 41 H 0.257 0.743 42 H -0.226 1.226 43 H -0.216 1.216 44 H 0.182 0.818 45 H 0.174 0.826 46 H 0.129 0.871 47 H 0.090 0.910 48 H 0.162 0.838 49 H 0.162 0.838 50 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges -0.609 -1.289 -1.886 2.365 hybrid contribution -0.851 -0.560 -0.114 1.025 sum -1.460 -1.850 -2.000 3.091 Atomic orbital electron populations 1.23291 0.76640 1.05363 1.02125 1.86041 1.23301 1.27396 1.88804 1.19302 0.92851 0.84655 0.96850 1.20509 0.91485 0.98910 1.07641 1.19562 0.95339 0.91867 0.96625 1.21675 0.90231 0.99638 0.97589 0.87451 1.23418 0.96400 1.00007 0.95936 1.22184 0.81759 0.96698 0.98607 0.87452 1.45454 1.07097 1.13720 1.65993 1.19267 0.83483 0.87454 0.79776 1.90854 1.83943 1.14553 1.48139 1.21887 0.89265 0.79061 0.74399 1.93195 1.95081 1.62918 1.64293 1.93193 1.93417 1.84743 1.44009 1.86643 1.16555 1.35903 1.82599 1.19193 0.84184 0.92430 0.99833 1.21501 0.99854 0.93495 1.06391 1.20853 0.92352 0.99266 0.99328 1.19797 0.95013 0.94727 1.01410 1.24717 0.94352 1.11456 0.87770 1.86443 1.43803 1.84124 1.22925 0.94430 0.86790 0.75116 0.76067 1.21178 0.96897 0.93930 0.95079 1.20834 0.90205 1.01533 1.02165 1.23593 0.97444 0.99246 0.97379 1.21190 0.93743 0.98805 1.03886 1.21260 0.95087 0.97496 0.96276 1.21496 1.00928 0.92464 1.09133 0.91787 0.86741 0.91880 0.85259 0.89105 0.86724 0.73955 0.84457 0.85630 0.87952 0.74346 1.22640 1.21618 0.81843 0.82618 0.87065 0.91035 0.83833 0.83816 0.84335 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.04 9.81 113.37 1.11 1.07 16 2 O -0.34 -1.84 10.50 -92.39 -0.97 -2.81 16 3 C 0.11 0.52 6.69 22.51 0.15 0.67 16 4 C -0.17 -0.54 9.65 22.37 0.22 -0.32 16 5 C -0.03 0.02 5.29 -19.88 -0.11 -0.09 16 6 C -0.07 0.34 3.86 -11.01 -0.04 0.30 16 7 H 0.11 -0.64 8.09 -2.39 -0.02 -0.66 16 8 C -0.12 0.79 7.29 31.12 0.23 1.02 16 9 C 0.11 -0.38 4.32 45.51 0.20 -0.19 16 10 H 0.11 -0.13 7.46 -2.39 -0.02 -0.15 16 11 N -0.67 1.22 5.27 -440.06 -2.32 -1.10 16 12 C 0.52 2.85 7.34 87.66 0.64 3.49 16 13 O -0.50 -6.10 16.10 16.02 0.26 -5.84 16 14 C 0.43 2.78 2.05 71.24 0.15 2.93 16 15 F -0.17 -0.97 15.27 44.97 0.69 -0.28 16 16 F -0.17 -0.86 15.31 44.97 0.69 -0.17 16 17 O -0.30 -3.19 9.60 -73.43 -0.71 -3.90 16 18 C 0.09 0.82 6.48 22.51 0.15 0.96 16 19 C -0.19 -1.69 8.26 22.37 0.18 -1.50 16 20 C -0.10 -0.77 8.66 22.26 0.19 -0.57 16 21 C -0.11 -0.57 5.39 -19.85 -0.11 -0.68 16 22 C -0.07 0.08 2.79 71.24 0.20 0.28 16 23 O -0.56 0.58 12.81 -148.98 -1.91 -1.33 16 24 Si 0.77 -1.39 29.84 68.60 2.05 0.66 16 25 C -0.05 -0.21 9.68 22.25 0.22 0.01 16 26 C -0.13 -0.78 9.99 22.37 0.22 -0.56 16 27 C -0.14 0.55 7.26 31.12 0.23 0.78 16 28 C -0.16 0.23 8.55 22.28 0.19 0.42 16 29 C -0.08 0.04 10.04 22.26 0.22 0.26 16 30 C -0.22 -0.39 9.04 22.36 0.20 -0.19 16 31 H 0.06 -0.25 7.66 -2.39 -0.02 -0.27 16 32 H 0.11 -0.61 8.14 -2.39 -0.02 -0.63 16 33 H 0.06 -0.24 7.66 -2.39 -0.02 -0.25 16 34 H 0.13 0.25 8.05 -2.91 -0.02 0.23 16 35 H 0.09 -0.71 8.14 -2.39 -0.02 -0.73 16 36 H 0.11 -0.88 7.66 -2.38 -0.02 -0.90 16 37 H 0.42 -2.79 8.70 -92.70 -0.81 -3.60 16 38 H 0.14 0.96 5.10 -2.91 -0.01 0.95 16 39 H 0.13 0.80 4.86 -2.91 -0.01 0.78 16 40 H 0.10 -0.62 7.96 -2.39 -0.02 -0.64 16 41 H 0.40 -4.73 8.74 -74.06 -0.65 -5.37 16 42 H -0.30 -1.80 7.05 99.48 0.70 -1.10 16 43 H -0.29 -1.10 7.11 99.48 0.71 -0.39 16 44 H 0.16 -0.19 8.06 -2.91 -0.02 -0.22 16 45 H 0.16 0.41 8.06 -2.91 -0.02 0.39 16 46 H 0.11 -0.60 6.38 -2.39 -0.02 -0.62 16 47 H 0.07 -0.14 8.14 -2.38 -0.02 -0.15 16 48 H 0.14 -0.82 6.71 -2.91 -0.02 -0.84 16 49 H 0.14 -0.68 8.06 -2.91 -0.02 -0.70 16 50 H 0.14 -0.23 6.30 -2.91 -0.02 -0.25 16 Total: 0.00 -23.64 421.22 1.83 -21.81 By element: Atomic # 1 Polarization: -14.74 SS G_CDS: -0.39 Total: -15.13 kcal Atomic # 6 Polarization: 3.66 SS G_CDS: 4.44 Total: 8.10 kcal Atomic # 7 Polarization: 1.22 SS G_CDS: -2.32 Total: -1.10 kcal Atomic # 8 Polarization: -10.56 SS G_CDS: -3.33 Total: -13.88 kcal Atomic # 9 Polarization: -1.83 SS G_CDS: 1.38 Total: -0.45 kcal Atomic # 14 Polarization: -1.39 SS G_CDS: 2.05 Total: 0.66 kcal Total: -23.64 1.83 -21.81 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10812630_4549640.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -118.386 kcal (2) G-P(sol) polarization free energy of solvation -23.639 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -142.025 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.828 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.810 kcal (6) G-S(sol) free energy of system = (1) + (5) -140.196 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.88 seconds