Wall clock time and date at job start Sat Mar 6 2021 14:41:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35904 * 117.00131 * 2 1 4 4 C 1.38705 * 120.05924 * 180.25191 * 3 2 1 5 5 C 1.38173 * 119.94203 * 180.25551 * 4 3 2 6 6 C 1.50701 * 119.96834 * 179.74471 * 5 4 3 7 7 H 1.09003 * 112.85518 * 9.68962 * 6 5 4 8 8 C 1.53787 * 113.61355 * 140.88801 * 6 5 4 9 9 C 1.53957 * 87.01921 * 139.94984 * 8 6 5 10 10 H 1.08999 * 113.74064 * 220.05519 * 9 8 6 11 11 N 1.46495 * 113.53656 * 89.18914 * 9 8 6 12 12 C 1.34778 * 120.00238 * 107.50639 * 11 9 8 13 13 O 1.21284 * 119.99601 * 359.97438 * 12 11 9 14 14 C 1.50696 * 120.00312 * 179.97438 * 12 11 9 15 15 O 1.42901 * 109.47055 * 179.97438 * 14 12 11 16 16 C 1.35985 * 117.00088 * 179.97438 * 15 14 12 17 17 C 1.38673 * 120.00157 * 179.97438 * 16 15 14 18 18 C 1.50693 * 120.00104 * 359.97438 * 17 16 15 19 19 O 1.42904 * 109.47178 * 284.99536 * 18 17 16 20 20 Si 1.86297 * 109.47252 * 164.99646 * 18 17 16 21 21 C 1.38153 * 119.99973 * 180.02562 * 17 16 15 22 22 C 1.38682 * 120.00101 * 0.02562 * 21 17 16 23 23 O 1.35981 * 120.00234 * 180.02562 * 22 21 17 24 24 C 1.42900 * 116.99957 * 180.02562 * 23 22 21 25 25 C 1.38715 * 119.99753 * 0.02562 * 22 21 17 26 26 C 1.38112 * 120.00059 * 359.71832 * 25 22 21 27 27 C 1.53781 * 87.11318 * 334.63846 * 9 8 6 28 28 C 1.38232 * 120.05823 * 359.76822 * 5 4 3 29 29 C 1.38294 * 120.11124 * 359.97438 * 28 5 4 30 30 C 1.38122 * 120.05499 * 359.97438 * 29 28 5 31 31 H 1.09000 * 109.46950 * 300.00206 * 1 2 3 32 32 H 1.08994 * 109.46928 * 60.00366 * 1 2 3 33 33 H 1.08999 * 109.46959 * 179.97438 * 1 2 3 34 34 H 1.07997 * 120.03160 * 0.02562 * 4 3 2 35 35 H 1.08997 * 113.61249 * 254.53128 * 8 6 5 36 36 H 1.09000 * 113.60883 * 25.43270 * 8 6 5 37 37 H 0.97000 * 120.00206 * 287.50309 * 11 9 8 38 38 H 1.08996 * 109.47208 * 299.99709 * 14 12 11 39 39 H 1.09001 * 109.46759 * 59.99999 * 14 12 11 40 40 H 1.09007 * 109.47153 * 44.99401 * 18 17 16 41 41 H 0.96699 * 113.99661 * 60.00372 * 19 18 17 42 42 H 1.48499 * 110.00073 * 178.68253 * 20 18 17 43 43 H 1.48505 * 109.99946 * 299.99789 * 20 18 17 44 44 H 1.07997 * 119.99881 * 179.97438 * 21 17 16 45 45 H 1.08998 * 109.46827 * 180.02562 * 24 23 22 46 46 H 1.08999 * 109.46983 * 299.99803 * 24 23 22 47 47 H 1.08990 * 109.47540 * 60.00305 * 24 23 22 48 48 H 1.08001 * 120.00132 * 180.02562 * 25 22 21 49 49 H 1.08006 * 120.00214 * 180.29869 * 26 25 22 50 50 H 1.09005 * 113.61002 * 270.81340 * 27 9 8 51 51 H 1.08996 * 113.69227 * 139.92513 * 27 9 8 52 52 H 1.08003 * 119.94745 * 179.97438 * 28 5 4 53 53 H 1.08000 * 119.97251 * 179.97438 * 29 28 5 54 54 H 1.08002 * 120.02504 * 180.02562 * 30 29 28 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4311 1.2849 -0.0053 5 6 4.0559 2.5173 0.0001 6 6 5.5607 2.5983 0.0002 7 1 6.0367 1.6332 -0.1733 8 6 6.1169 3.7271 -0.8839 9 6 7.1510 3.9796 0.2284 10 1 7.3475 5.0356 0.4134 11 7 8.3763 3.1908 0.0779 12 6 9.5211 3.7904 -0.3045 13 8 9.5368 4.9830 -0.5246 14 6 10.7817 2.9791 -0.4588 15 8 11.8507 3.8336 -0.8700 16 6 13.0672 3.2548 -1.0553 17 6 14.1483 4.0260 -1.4548 18 6 13.9750 5.5052 -1.6841 19 8 13.2854 5.7186 -2.9174 20 14 15.6475 6.3224 -1.7584 21 6 15.3841 3.4379 -1.6436 22 6 15.5433 2.0762 -1.4342 23 8 16.7598 1.4974 -1.6196 24 6 16.8511 0.0906 -1.3863 25 6 14.4616 1.3047 -1.0357 26 6 13.2275 1.8936 -0.8418 27 6 6.1365 3.3614 1.2048 28 6 3.3019 3.6758 0.0058 29 6 1.9208 3.6048 0.0057 30 6 1.2914 2.3753 -0.0007 31 1 -0.3633 0.5139 0.8900 32 1 -0.3633 0.5138 -0.8900 33 1 -0.3633 -1.0277 -0.0005 34 1 4.0207 0.3801 -0.0098 35 1 6.5555 3.3748 -1.8174 36 1 5.4199 4.5528 -1.0275 37 1 8.3637 2.2369 0.2536 38 1 11.0336 2.5145 0.4945 39 1 10.6259 2.2052 -1.2104 40 1 13.3969 5.9345 -0.8656 41 1 12.4051 5.3197 -2.9498 42 1 15.4914 7.7765 -2.0158 43 1 16.3749 6.1079 -0.4816 44 1 16.2259 4.0384 -1.9552 45 1 17.8727 -0.2424 -1.5693 46 1 16.5786 -0.1248 -0.3531 47 1 16.1719 -0.4340 -2.0581 48 1 14.5856 0.2444 -0.8722 49 1 12.3864 1.2937 -0.5268 50 1 5.4449 4.0870 1.6331 51 1 6.5896 2.7142 1.9557 52 1 3.7921 4.6382 0.0104 53 1 1.3339 4.5113 0.0107 54 1 0.2127 2.3204 -0.0012 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10812630_4974302.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:41:50 Heat of formation + Delta-G solvation = -87.870350 kcal Electronic energy + Delta-G solvation = -36250.959530 eV Core-core repulsion = 31314.930379 eV Total energy + Delta-G solvation = -4936.029151 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 400.181 amu Computer time = 1.58 seconds Orbital eigenvalues (eV) -41.91252 -41.58215 -40.91657 -40.15138 -39.47766 -38.16902 -37.81581 -36.92298 -34.64466 -32.81796 -32.20357 -31.23575 -30.81591 -29.35971 -28.24487 -27.95484 -26.70990 -26.59303 -25.94879 -23.88229 -23.57050 -22.42476 -22.38024 -21.86500 -20.32077 -19.54330 -18.90439 -18.69457 -18.44080 -18.03818 -17.49276 -17.45657 -17.24937 -16.97600 -16.84249 -16.68260 -16.60578 -16.10502 -15.97051 -15.77788 -15.56707 -15.45379 -15.31766 -15.05076 -14.52609 -14.44304 -14.31390 -14.18663 -14.09091 -14.02306 -13.56295 -13.51479 -13.43327 -13.27249 -13.19821 -13.03462 -12.70656 -12.51514 -12.31641 -12.29712 -12.12703 -12.03025 -11.66526 -11.60109 -11.44456 -11.30912 -11.29230 -11.23689 -11.01780 -10.18942 -10.09591 -9.76029 -9.17011 -8.82188 -4.93547 0.06586 0.31124 0.33409 0.46268 1.33536 1.39943 1.42150 1.58066 1.91413 2.33887 2.35162 2.53932 2.56539 2.72068 3.44022 3.45920 3.54428 3.66213 3.71827 3.74296 3.85748 3.86367 3.93930 3.94923 4.07534 4.07968 4.09548 4.13388 4.17468 4.21352 4.26561 4.27942 4.33480 4.37402 4.45335 4.45990 4.53158 4.60802 4.63374 4.69974 4.70623 4.76748 4.80221 4.82680 4.95433 4.97527 5.00436 5.08570 5.12164 5.12465 5.20921 5.32888 5.41166 5.45835 5.50635 5.68586 5.80924 6.12597 6.39986 6.42190 6.45929 6.52021 7.09514 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.339 6.339 3 C 0.109 3.891 4 C -0.164 4.164 5 C -0.035 4.035 6 C -0.066 4.066 7 H 0.114 0.886 8 C -0.141 4.141 9 C 0.117 3.883 10 H 0.085 0.915 11 N -0.692 5.692 12 C 0.516 3.484 13 O -0.570 6.570 14 C 0.038 3.962 15 O -0.316 6.316 16 C 0.090 3.910 17 C -0.119 4.119 18 C -0.081 4.081 19 O -0.545 6.545 20 Si 0.810 3.190 21 C -0.119 4.119 22 C 0.091 3.909 23 O -0.333 6.333 24 C 0.017 3.983 25 C -0.162 4.162 26 C -0.159 4.159 27 C -0.123 4.123 28 C -0.161 4.161 29 C -0.085 4.085 30 C -0.222 4.222 31 H 0.063 0.937 32 H 0.062 0.938 33 H 0.115 0.885 34 H 0.134 0.866 35 H 0.070 0.930 36 H 0.096 0.904 37 H 0.421 0.579 38 H 0.124 0.876 39 H 0.127 0.873 40 H 0.062 0.938 41 H 0.372 0.628 42 H -0.294 1.294 43 H -0.264 1.264 44 H 0.152 0.848 45 H 0.114 0.886 46 H 0.066 0.934 47 H 0.067 0.933 48 H 0.161 0.839 49 H 0.168 0.832 50 H 0.100 0.900 51 H 0.091 0.909 52 H 0.137 0.863 53 H 0.141 0.859 54 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.698 -9.434 2.212 10.058 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.254 6.254 3 C 0.064 3.936 4 C -0.182 4.182 5 C -0.035 4.035 6 C -0.084 4.084 7 H 0.132 0.868 8 C -0.179 4.179 9 C 0.012 3.988 10 H 0.103 0.897 11 N -0.346 5.346 12 C 0.302 3.698 13 O -0.447 6.447 14 C -0.040 4.040 15 O -0.230 6.230 16 C 0.045 3.955 17 C -0.120 4.120 18 C -0.188 4.188 19 O -0.351 6.351 20 Si 0.712 3.288 21 C -0.137 4.137 22 C 0.045 3.955 23 O -0.247 6.247 24 C -0.077 4.077 25 C -0.180 4.180 26 C -0.178 4.178 27 C -0.160 4.160 28 C -0.179 4.179 29 C -0.103 4.103 30 C -0.241 4.241 31 H 0.081 0.919 32 H 0.081 0.919 33 H 0.134 0.866 34 H 0.152 0.848 35 H 0.089 0.911 36 H 0.114 0.886 37 H 0.259 0.741 38 H 0.141 0.859 39 H 0.144 0.856 40 H 0.079 0.921 41 H 0.220 0.780 42 H -0.222 1.222 43 H -0.190 1.190 44 H 0.169 0.831 45 H 0.133 0.867 46 H 0.085 0.915 47 H 0.086 0.914 48 H 0.179 0.821 49 H 0.185 0.815 50 H 0.119 0.881 51 H 0.110 0.890 52 H 0.155 0.845 53 H 0.159 0.841 54 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges -1.429 -7.609 2.188 8.045 hybrid contribution -2.320 -0.751 0.900 2.599 sum -3.749 -8.360 3.088 9.668 Atomic orbital electron populations 1.23289 0.76682 1.05389 1.02074 1.86038 1.23246 1.27279 1.88786 1.19304 0.92916 0.84590 0.96774 1.20515 0.91398 0.98891 1.07442 1.19629 0.95654 0.91780 0.96404 1.21633 0.89798 0.99663 0.97304 0.86751 1.23580 0.97796 0.98876 0.97684 1.21870 0.83258 0.96233 0.97471 0.89729 1.45346 1.07410 1.13020 1.68848 1.20525 0.85305 0.87749 0.76178 1.90775 1.85990 1.17456 1.50527 1.22714 0.83905 0.92762 1.04638 1.86084 1.16012 1.37208 1.83693 1.18794 0.84627 0.92238 0.99875 1.19451 0.91984 0.96352 1.04202 1.25509 1.09343 0.95173 0.88824 1.86661 1.34132 1.79351 1.34974 0.92229 0.75838 0.76342 0.84436 1.20182 0.96596 0.93062 1.03810 1.18980 0.85583 0.92348 0.98559 1.86087 1.28046 1.25951 1.84648 1.23355 1.05235 0.77234 1.01901 1.21422 0.91904 1.01572 1.03104 1.21376 0.99685 0.92630 1.04072 1.23367 0.96767 0.99814 0.96101 1.21166 0.93806 0.98818 1.04150 1.21235 0.95048 0.97538 0.96474 1.21486 1.00920 0.92459 1.09220 0.91863 0.91949 0.86642 0.84770 0.91104 0.88561 0.74091 0.85878 0.85561 0.92058 0.77985 1.22178 1.18965 0.83083 0.86742 0.91542 0.91401 0.82118 0.81494 0.88140 0.89016 0.84480 0.84097 0.84364 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 9.81 113.37 1.11 1.06 16 2 O -0.34 -1.52 10.50 -92.47 -0.97 -2.49 16 3 C 0.11 0.46 6.69 22.51 0.15 0.61 16 4 C -0.16 -0.37 9.65 22.37 0.22 -0.15 16 5 C -0.03 0.02 5.29 -19.88 -0.11 -0.09 16 6 C -0.07 0.35 3.85 -11.01 -0.04 0.31 16 7 H 0.11 -0.95 8.09 -2.39 -0.02 -0.97 16 8 C -0.14 0.46 7.27 31.18 0.23 0.69 16 9 C 0.12 -0.34 4.33 45.58 0.20 -0.15 16 10 H 0.08 0.20 7.46 -2.39 -0.02 0.18 16 11 N -0.69 3.75 5.26 -439.76 -2.31 1.44 16 12 C 0.52 0.67 7.91 87.66 0.69 1.37 16 13 O -0.57 -7.42 16.10 16.00 0.26 -7.17 16 14 C 0.04 -0.17 5.22 71.23 0.37 0.20 16 15 O -0.32 -1.37 8.56 -74.34 -0.64 -2.01 16 16 C 0.09 0.30 6.62 22.49 0.15 0.45 16 17 C -0.12 -0.72 5.27 -19.78 -0.10 -0.82 16 18 C -0.08 -0.67 2.33 71.23 0.17 -0.51 16 19 O -0.54 -5.49 12.65 -148.98 -1.89 -7.37 16 20 Si 0.81 4.47 30.17 68.60 2.07 6.54 16 21 C -0.12 -0.53 8.59 22.36 0.19 -0.34 16 22 C 0.09 0.24 6.69 22.49 0.15 0.39 16 23 O -0.33 -0.71 10.50 -93.33 -0.98 -1.69 16 24 C 0.02 -0.10 9.81 113.37 1.11 1.01 16 25 C -0.16 0.32 9.03 22.35 0.20 0.52 16 26 C -0.16 0.40 9.03 22.36 0.20 0.60 16 27 C -0.12 0.77 7.29 31.12 0.23 0.99 16 28 C -0.16 0.07 8.53 22.28 0.19 0.26 16 29 C -0.09 -0.02 10.04 22.26 0.22 0.20 16 30 C -0.22 -0.40 9.04 22.37 0.20 -0.20 16 31 H 0.06 -0.27 7.66 -2.39 -0.02 -0.29 16 32 H 0.06 -0.26 7.66 -2.39 -0.02 -0.28 16 33 H 0.12 -0.71 8.14 -2.39 -0.02 -0.73 16 34 H 0.13 0.01 8.05 -2.91 -0.02 -0.01 16 35 H 0.07 -0.13 8.14 -2.39 -0.02 -0.15 16 36 H 0.10 -0.28 6.39 -2.39 -0.02 -0.29 16 37 H 0.42 -5.40 8.70 -92.71 -0.81 -6.21 16 38 H 0.12 -1.31 7.65 -2.39 -0.02 -1.32 16 39 H 0.13 -1.39 7.67 -2.39 -0.02 -1.41 16 40 H 0.06 0.66 7.82 -2.38 -0.02 0.65 16 41 H 0.37 2.81 8.60 -74.06 -0.64 2.17 16 42 H -0.29 -3.48 7.11 99.48 0.71 -2.78 16 43 H -0.26 -1.96 7.11 99.48 0.71 -1.25 16 44 H 0.15 0.26 5.13 -2.91 -0.01 0.25 16 45 H 0.11 -0.97 8.14 -2.39 -0.02 -0.99 16 46 H 0.07 -0.54 7.66 -2.39 -0.02 -0.55 16 47 H 0.07 -0.55 7.66 -2.39 -0.02 -0.57 16 48 H 0.16 -1.25 6.29 -2.91 -0.02 -1.26 16 49 H 0.17 -1.71 6.29 -2.91 -0.02 -1.73 16 50 H 0.10 -0.57 7.64 -2.38 -0.02 -0.59 16 51 H 0.09 -0.77 8.14 -2.39 -0.02 -0.79 16 52 H 0.14 -0.49 6.72 -2.91 -0.02 -0.51 16 53 H 0.14 -0.52 8.06 -2.91 -0.02 -0.54 16 54 H 0.14 -0.22 6.30 -2.91 -0.02 -0.24 16 Total: 0.00 -27.40 440.31 0.83 -26.57 By element: Atomic # 1 Polarization: -19.79 SS G_CDS: -0.44 Total: -20.23 kcal Atomic # 6 Polarization: 0.68 SS G_CDS: 5.73 Total: 6.41 kcal Atomic # 7 Polarization: 3.75 SS G_CDS: -2.31 Total: 1.44 kcal Atomic # 8 Polarization: -16.52 SS G_CDS: -4.21 Total: -20.73 kcal Atomic # 14 Polarization: 4.47 SS G_CDS: 2.07 Total: 6.54 kcal Total: -27.40 0.83 -26.57 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10812630_4974302.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -61.296 kcal (2) G-P(sol) polarization free energy of solvation -27.405 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -88.701 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.831 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.574 kcal (6) G-S(sol) free energy of system = (1) + (5) -87.870 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.58 seconds