Wall clock time and date at job start Sat Mar 6 2021 14:41:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35904 * 116.99924 * 2 1 4 4 C 1.38611 * 120.02778 * 180.27770 * 3 2 1 5 5 C 1.38649 * 119.88627 * 180.21162 * 4 3 2 6 6 O 1.35902 * 120.02537 * 179.79245 * 5 4 3 7 7 C 1.42907 * 116.99832 * 359.72074 * 6 5 4 8 8 C 1.50699 * 109.46956 * 179.97438 * 7 6 5 9 9 O 1.21285 * 119.99988 * 0.02562 * 8 7 6 10 10 N 1.34773 * 119.99794 * 180.02562 * 8 7 6 11 11 C 1.46503 * 119.99961 * 180.02562 * 10 8 7 12 12 H 1.09004 * 112.84974 * 336.19724 * 11 10 8 13 13 C 1.53781 * 113.61595 * 107.50313 * 11 10 8 14 14 C 1.53784 * 87.08186 * 89.11512 * 13 11 10 15 15 H 1.09003 * 113.69177 * 270.87781 * 14 13 11 16 16 C 1.50701 * 113.61237 * 139.97968 * 14 13 11 17 17 C 1.38232 * 119.97343 * 322.50512 * 16 14 13 18 18 C 1.38294 * 120.11124 * 180.02562 * 17 16 14 19 19 C 1.38122 * 120.05499 * 359.97438 * 18 17 16 20 20 C 1.38756 * 119.94212 * 0.28466 * 19 18 17 21 21 O 1.35904 * 120.05096 * 179.71799 * 20 19 18 22 22 C 1.42900 * 117.00131 * 359.97438 * 21 20 19 23 23 C 1.38173 * 119.96834 * 142.52862 * 16 14 13 24 24 C 1.53781 * 87.07986 * 25.43321 * 14 13 11 25 25 C 1.38753 * 119.95082 * 359.51666 * 5 4 3 26 26 C 1.50694 * 119.97315 * 180.27625 * 25 5 4 27 27 O 1.42894 * 109.47560 * 284.99531 * 26 25 5 28 28 Si 1.86309 * 109.46875 * 164.99869 * 26 25 5 29 29 C 1.38191 * 120.05028 * 0.24928 * 25 5 4 30 30 C 1.38156 * 120.11264 * 359.97438 * 29 25 5 31 31 H 1.09000 * 109.47207 * 299.99471 * 1 2 3 32 32 H 1.09004 * 109.47354 * 59.99864 * 1 2 3 33 33 H 1.08999 * 109.46977 * 179.97438 * 1 2 3 34 34 H 1.07997 * 120.05088 * 359.97438 * 4 3 2 35 35 H 1.09007 * 109.46718 * 60.00303 * 7 6 5 36 36 H 1.08999 * 109.46992 * 300.00175 * 7 6 5 37 37 H 0.96999 * 120.00124 * 0.02562 * 10 8 7 38 38 H 1.08997 * 113.61243 * 334.56991 * 13 11 10 39 39 H 1.08996 * 113.61540 * 203.66090 * 13 11 10 40 40 H 1.08003 * 119.94745 * 359.97438 * 17 16 14 41 41 H 1.07999 * 119.97251 * 180.02562 * 18 17 16 42 42 H 1.08002 * 120.02504 * 180.02562 * 19 18 17 43 43 H 1.08999 * 109.46959 * 179.97438 * 22 21 20 44 44 H 1.09000 * 109.46950 * 300.00206 * 22 21 20 45 45 H 1.08994 * 109.46928 * 60.00366 * 22 21 20 46 46 H 1.07997 * 120.02588 * 359.97438 * 23 16 14 47 47 H 1.09008 * 113.61801 * 89.11394 * 24 14 13 48 48 H 1.09002 * 113.61815 * 220.01661 * 24 14 13 49 49 H 1.09000 * 109.47759 * 45.00048 * 26 25 5 50 50 H 0.96704 * 114.00128 * 300.00808 * 27 26 25 51 51 H 1.48499 * 109.99658 * 179.97438 * 28 26 25 52 52 H 1.48496 * 109.99967 * 301.31632 * 28 26 25 53 53 H 1.07999 * 119.94785 * 179.97438 * 29 25 5 54 54 H 1.08004 * 119.97434 * 180.02562 * 30 29 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 3.4301 1.2842 -0.0058 5 6 4.0565 2.5211 -0.0014 6 8 5.4135 2.5962 -0.0028 7 6 6.1316 1.3606 -0.0027 8 6 7.6124 1.6403 -0.0051 9 8 8.0133 2.7850 -0.0061 10 7 8.4911 0.6184 -0.0059 11 6 9.9307 0.8903 -0.0076 12 1 10.1756 1.8719 -0.4134 13 6 10.6162 0.5883 1.3354 14 6 10.8317 -0.8423 0.8141 15 1 10.0077 -1.5194 1.0395 16 6 12.1775 -1.4187 1.1717 17 6 13.2984 -0.6099 1.1674 18 6 14.5348 -1.1360 1.4946 19 6 14.6524 -2.4714 1.8270 20 6 13.5295 -3.2866 1.8268 21 8 13.6435 -4.6022 2.1480 22 6 14.9502 -5.0793 2.4751 23 6 12.2898 -2.7554 1.5031 24 6 10.7723 -0.2503 -0.6040 25 6 3.2969 3.6822 -0.0012 26 6 3.9772 5.0269 -0.0027 27 8 4.5047 5.2954 1.2979 28 14 2.7431 6.3467 -0.4568 29 6 1.9171 3.6065 -0.0003 30 6 1.2905 2.3753 -0.0001 31 1 -0.3633 0.5137 0.8900 32 1 -0.3634 0.5139 -0.8900 33 1 -0.3633 -1.0277 -0.0005 34 1 4.0195 0.3792 -0.0099 35 1 5.8690 0.7878 -0.8922 36 1 5.8708 0.7888 0.8878 37 1 8.1704 -0.2970 -0.0055 38 1 9.9436 0.6444 2.1912 39 1 11.5428 1.1420 1.4869 40 1 13.2087 0.4345 0.9073 41 1 15.4091 -0.5019 1.4909 42 1 15.6181 -2.8817 2.0828 43 1 14.9003 -6.1422 2.7114 44 1 15.6160 -4.9264 1.6257 45 1 15.3309 -4.5331 3.3381 46 1 11.4137 -3.3868 1.5063 47 1 11.7416 0.0742 -0.9827 48 1 10.2257 -0.8712 -1.3138 49 1 4.7890 5.0227 -0.7302 50 1 3.8368 5.3142 1.9970 51 1 3.4016 7.6777 -0.4612 52 1 2.1638 6.0617 -1.7941 53 1 1.3275 4.5114 0.0002 54 1 0.2119 2.3187 0.0002 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10812630_4974312.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:41:54 Heat of formation + Delta-G solvation = -86.384834 kcal Electronic energy + Delta-G solvation = -36327.393571 eV Core-core repulsion = 31391.428836 eV Total energy + Delta-G solvation = -4935.964734 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 400.181 amu Computer time = 1.78 seconds Orbital eigenvalues (eV) -41.93082 -41.59083 -40.92527 -40.15700 -39.50207 -38.31169 -37.84197 -36.91204 -34.66526 -32.31413 -32.19485 -31.46382 -30.96924 -29.40117 -28.34435 -28.24018 -26.72144 -26.11211 -25.96810 -23.85274 -23.56395 -22.50192 -22.38348 -21.88038 -20.33862 -19.93254 -18.83551 -18.54734 -18.04343 -17.82132 -17.55874 -17.25543 -17.17702 -16.97937 -16.79335 -16.68660 -16.66597 -16.50387 -16.01625 -15.86327 -15.75774 -15.38162 -15.17113 -15.10633 -14.61905 -14.45906 -14.45270 -14.32341 -14.03601 -13.87657 -13.56793 -13.47139 -13.32218 -13.28231 -13.20702 -13.14760 -12.70169 -12.48600 -12.31922 -12.26427 -12.13306 -12.01180 -11.86547 -11.67030 -11.62432 -11.60654 -11.30167 -11.07822 -10.35200 -10.21209 -9.76491 -9.70001 -9.17303 -9.09964 -5.03352 0.20965 0.30317 0.30780 0.46024 1.32005 1.36648 1.39787 1.65054 1.98901 2.25117 2.33743 2.54109 2.58113 2.71755 3.42685 3.47488 3.60854 3.65539 3.71293 3.73883 3.83607 3.85868 3.92216 3.92637 4.02167 4.07282 4.08599 4.16766 4.16999 4.26393 4.33593 4.34864 4.37016 4.39840 4.44298 4.46927 4.52828 4.59941 4.61458 4.62918 4.69851 4.75557 4.80342 4.81376 4.94638 4.99139 5.02396 5.07958 5.10605 5.23819 5.28074 5.32531 5.43794 5.48092 5.50415 5.67981 5.80568 6.11802 6.35297 6.41282 6.42130 6.86670 7.06758 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.016 3.984 2 O -0.331 6.331 3 C 0.163 3.837 4 C -0.254 4.254 5 C 0.173 3.827 6 O -0.305 6.305 7 C 0.035 3.965 8 C 0.517 3.483 9 O -0.568 6.568 10 N -0.692 5.692 11 C 0.116 3.884 12 H 0.085 0.915 13 C -0.141 4.141 14 C -0.066 4.066 15 H 0.113 0.887 16 C -0.035 4.035 17 C -0.161 4.161 18 C -0.084 4.084 19 C -0.222 4.222 20 C 0.110 3.890 21 O -0.340 6.340 22 C 0.020 3.980 23 C -0.164 4.164 24 C -0.121 4.121 25 C -0.203 4.203 26 C -0.068 4.068 27 O -0.558 6.558 28 Si 0.794 3.206 29 C -0.031 4.031 30 C -0.237 4.237 31 H 0.071 0.929 32 H 0.068 0.932 33 H 0.115 0.885 34 H 0.152 0.848 35 H 0.122 0.878 36 H 0.122 0.878 37 H 0.421 0.579 38 H 0.069 0.931 39 H 0.098 0.902 40 H 0.138 0.862 41 H 0.142 0.858 42 H 0.140 0.860 43 H 0.115 0.885 44 H 0.063 0.937 45 H 0.062 0.938 46 H 0.134 0.866 47 H 0.102 0.898 48 H 0.091 0.909 49 H 0.080 0.920 50 H 0.391 0.609 51 H -0.304 1.304 52 H -0.280 1.280 53 H 0.167 0.833 54 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.635 -6.074 1.135 7.724 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 O -0.244 6.244 3 C 0.117 3.883 4 C -0.273 4.273 5 C 0.127 3.873 6 O -0.217 6.217 7 C -0.043 4.043 8 C 0.303 3.697 9 O -0.445 6.445 10 N -0.346 5.346 11 C 0.010 3.990 12 H 0.103 0.897 13 C -0.180 4.180 14 C -0.084 4.084 15 H 0.131 0.869 16 C -0.035 4.035 17 C -0.179 4.179 18 C -0.102 4.102 19 C -0.240 4.240 20 C 0.065 3.935 21 O -0.254 6.254 22 C -0.074 4.074 23 C -0.183 4.183 24 C -0.159 4.159 25 C -0.205 4.205 26 C -0.177 4.177 27 O -0.365 6.365 28 Si 0.699 3.301 29 C -0.048 4.048 30 C -0.256 4.256 31 H 0.090 0.910 32 H 0.087 0.913 33 H 0.134 0.866 34 H 0.169 0.831 35 H 0.140 0.860 36 H 0.140 0.860 37 H 0.259 0.741 38 H 0.087 0.913 39 H 0.117 0.883 40 H 0.155 0.845 41 H 0.160 0.840 42 H 0.157 0.843 43 H 0.134 0.866 44 H 0.082 0.918 45 H 0.081 0.919 46 H 0.151 0.849 47 H 0.120 0.880 48 H 0.110 0.890 49 H 0.098 0.902 50 H 0.240 0.760 51 H -0.232 1.232 52 H -0.206 1.206 53 H 0.184 0.816 54 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges -3.940 -4.824 0.252 6.234 hybrid contribution 0.935 -0.964 -0.106 1.348 sum -3.005 -5.788 0.146 6.524 Atomic orbital electron populations 1.23413 0.75937 1.05706 1.02792 1.86057 1.23827 1.26600 1.87940 1.18881 0.91598 0.85086 0.92726 1.20545 0.93546 0.97331 1.15886 1.18627 0.81668 0.93326 0.93694 1.86223 1.15666 1.31644 1.88192 1.22730 0.88380 0.86520 1.06654 1.20458 0.88486 0.85147 0.75601 1.90779 1.80700 1.23255 1.49808 1.45343 1.05236 1.09498 1.74524 1.21861 0.79291 0.99992 0.97823 0.89709 1.23559 1.01421 0.95783 0.97211 1.21622 0.94080 0.95898 0.96800 0.86879 1.19613 0.95581 0.92036 0.96243 1.21170 0.92162 1.00816 1.03796 1.21238 0.98445 0.94474 0.96076 1.21488 0.98441 0.95586 1.08503 1.19292 0.94892 0.83366 0.95990 1.86040 1.33679 1.22467 1.83179 1.23293 0.81862 1.01511 1.00777 1.20505 0.95871 0.95758 1.06144 1.23367 1.00777 0.95831 0.95938 1.19752 0.93854 0.94016 1.12836 1.25138 1.04372 0.99680 0.88479 1.86542 1.39295 1.93694 1.16989 0.94127 0.80335 0.73076 0.82564 1.20861 0.91496 0.98627 0.93865 1.21453 1.01801 0.91155 1.11182 0.91019 0.91322 0.86643 0.83052 0.86019 0.86019 0.74138 0.91272 0.88335 0.84472 0.84010 0.84276 0.86637 0.91838 0.91923 0.84855 0.87962 0.89047 0.90198 0.76019 1.23202 1.20649 0.81635 0.82102 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.10 9.81 113.37 1.11 1.01 16 2 O -0.33 -0.24 10.49 -92.47 -0.97 -1.21 16 3 C 0.16 0.27 6.68 22.49 0.15 0.42 16 4 C -0.25 -0.68 8.97 22.46 0.20 -0.47 16 5 C 0.17 1.10 6.66 22.49 0.15 1.25 16 6 O -0.30 -2.91 8.99 -73.42 -0.66 -3.57 16 7 C 0.04 0.02 5.22 71.24 0.37 0.40 16 8 C 0.52 2.90 7.91 87.66 0.69 3.59 16 9 O -0.57 -9.92 16.10 15.99 0.26 -9.66 16 10 N -0.69 1.39 5.26 -440.02 -2.32 -0.93 16 11 C 0.12 -0.05 4.32 45.52 0.20 0.15 16 12 H 0.08 0.41 7.46 -2.38 -0.02 0.39 16 13 C -0.14 0.16 7.25 31.12 0.23 0.39 16 14 C -0.07 0.22 3.86 -11.01 -0.04 0.18 16 15 H 0.11 -0.69 8.09 -2.39 -0.02 -0.71 16 16 C -0.03 -0.03 5.29 -19.88 -0.11 -0.13 16 17 C -0.16 -0.11 8.61 22.28 0.19 0.08 16 18 C -0.08 -0.09 10.04 22.26 0.22 0.13 16 19 C -0.22 -0.58 9.04 22.37 0.20 -0.37 16 20 C 0.11 0.57 6.69 22.51 0.15 0.72 16 21 O -0.34 -1.82 10.50 -92.47 -0.97 -2.79 16 22 C 0.02 -0.04 9.81 113.37 1.11 1.07 16 23 C -0.16 -0.58 9.65 22.37 0.22 -0.37 16 24 C -0.12 0.53 7.29 31.12 0.23 0.75 16 25 C -0.20 -0.94 5.27 -19.75 -0.10 -1.05 16 26 C -0.07 -0.45 2.37 71.23 0.17 -0.28 16 27 O -0.56 -4.57 12.88 -148.98 -1.92 -6.49 16 28 Si 0.79 0.74 29.91 68.60 2.05 2.79 16 29 C -0.03 0.04 8.65 22.24 0.19 0.23 16 30 C -0.24 0.40 9.04 22.38 0.20 0.60 16 31 H 0.07 -0.64 7.66 -2.39 -0.02 -0.66 16 32 H 0.07 -0.59 7.66 -2.38 -0.02 -0.60 16 33 H 0.12 -1.10 8.14 -2.39 -0.02 -1.11 16 34 H 0.15 -0.24 6.30 -2.91 -0.02 -0.26 16 35 H 0.12 -0.64 7.65 -2.38 -0.02 -0.65 16 36 H 0.12 -0.60 7.67 -2.39 -0.02 -0.62 16 37 H 0.42 -3.92 8.70 -92.71 -0.81 -4.73 16 38 H 0.07 0.04 8.14 -2.39 -0.02 0.02 16 39 H 0.10 -0.12 6.31 -2.39 -0.02 -0.14 16 40 H 0.14 -0.33 6.65 -2.91 -0.02 -0.35 16 41 H 0.14 -0.42 8.06 -2.91 -0.02 -0.44 16 42 H 0.14 -0.14 6.30 -2.91 -0.02 -0.16 16 43 H 0.12 -0.63 8.14 -2.39 -0.02 -0.65 16 44 H 0.06 -0.24 7.66 -2.39 -0.02 -0.26 16 45 H 0.06 -0.22 7.66 -2.39 -0.02 -0.24 16 46 H 0.13 0.21 8.05 -2.91 -0.02 0.18 16 47 H 0.10 -0.42 7.72 -2.38 -0.02 -0.44 16 48 H 0.09 -0.59 8.14 -2.39 -0.02 -0.61 16 49 H 0.08 0.99 7.82 -2.39 -0.02 0.97 16 50 H 0.39 -0.72 8.70 -74.05 -0.64 -1.37 16 51 H -0.30 -2.74 7.11 99.48 0.71 -2.03 16 52 H -0.28 -1.28 7.11 99.48 0.71 -0.57 16 53 H 0.17 -1.28 5.12 -2.91 -0.01 -1.30 16 54 H 0.16 -1.19 6.29 -2.91 -0.02 -1.21 16 Total: 0.00 -31.88 440.90 0.76 -31.12 By element: Atomic # 1 Polarization: -17.09 SS G_CDS: -0.45 Total: -17.54 kcal Atomic # 6 Polarization: 2.54 SS G_CDS: 5.74 Total: 8.28 kcal Atomic # 7 Polarization: 1.39 SS G_CDS: -2.32 Total: -0.93 kcal Atomic # 8 Polarization: -19.46 SS G_CDS: -4.26 Total: -23.72 kcal Atomic # 14 Polarization: 0.74 SS G_CDS: 2.05 Total: 2.79 kcal Total: -31.88 0.76 -31.12 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10812630_4974312.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -55.264 kcal (2) G-P(sol) polarization free energy of solvation -31.881 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -87.145 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.760 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.121 kcal (6) G-S(sol) free energy of system = (1) + (5) -86.385 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.78 seconds