Wall clock time and date at job start Sat Mar 6 2021 14:42:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35904 * 117.00131 * 2 1 4 4 C 1.38705 * 120.05924 * 180.25191 * 3 2 1 5 5 C 1.38173 * 119.94203 * 180.25551 * 4 3 2 6 6 C 1.50701 * 119.96834 * 179.74471 * 5 4 3 7 7 H 1.09003 * 112.85468 * 11.21782 * 6 5 4 8 8 C 1.53784 * 113.61237 * 142.52862 * 6 5 4 9 9 C 1.53781 * 87.08186 * 139.97968 * 8 6 5 10 10 H 1.09004 * 113.68928 * 220.00714 * 9 8 6 11 11 N 1.46503 * 113.61595 * 89.11512 * 9 8 6 12 12 C 1.34773 * 119.99961 * 107.50313 * 11 9 8 13 13 O 1.21285 * 120.00218 * 359.97438 * 12 11 9 14 14 C 1.50699 * 119.99794 * 180.02562 * 12 11 9 15 15 O 1.42907 * 109.46956 * 180.02562 * 14 12 11 16 16 C 1.35916 * 116.99651 * 179.97438 * 15 14 12 17 17 C 1.38796 * 120.05648 * 179.97438 * 16 15 14 18 18 Br 1.89103 * 120.03518 * 0.02562 * 17 16 15 19 19 C 1.38234 * 119.93190 * 180.02562 * 17 16 15 20 20 C 1.38243 * 120.04320 * 0.02562 * 19 17 16 21 21 C 1.50699 * 119.94201 * 180.02562 * 20 19 17 22 22 O 1.42894 * 109.47296 * 64.99917 * 21 20 19 23 23 Si 1.86308 * 109.47057 * 184.99954 * 21 20 19 24 24 C 1.38288 * 120.11578 * 359.97438 * 20 19 17 25 25 C 1.38140 * 120.07154 * 359.76582 * 24 20 19 26 26 C 1.53781 * 113.61324 * 240.02278 * 6 5 4 27 27 C 1.38232 * 120.05823 * 359.76822 * 5 4 3 28 28 C 1.38294 * 120.11124 * 359.97438 * 27 5 4 29 29 C 1.38122 * 120.05499 * 359.97438 * 28 27 5 30 30 H 1.09000 * 109.46950 * 300.00206 * 1 2 3 31 31 H 1.08994 * 109.46928 * 60.00366 * 1 2 3 32 32 H 1.08999 * 109.46959 * 179.97438 * 1 2 3 33 33 H 1.07997 * 120.03160 * 0.02562 * 4 3 2 34 34 H 1.08997 * 113.61126 * 254.52600 * 8 6 5 35 35 H 1.08996 * 113.61139 * 25.43005 * 8 6 5 36 36 H 0.96999 * 119.99915 * 287.49683 * 11 9 8 37 37 H 1.09007 * 109.47028 * 299.99358 * 14 12 11 38 38 H 1.08999 * 109.47545 * 60.00014 * 14 12 11 39 39 H 1.08002 * 119.98039 * 179.97438 * 19 17 16 40 40 H 1.09000 * 109.47081 * 304.99179 * 21 20 19 41 41 H 0.96698 * 114.00573 * 59.99840 * 22 21 20 42 42 H 1.48502 * 109.99618 * 180.02562 * 23 21 20 43 43 H 1.48505 * 109.99564 * 301.31240 * 23 21 20 44 44 H 1.08000 * 119.96218 * 180.02562 * 24 20 19 45 45 H 1.08003 * 120.02224 * 180.25347 * 25 24 20 46 46 H 1.09008 * 113.61801 * 334.56830 * 26 6 5 47 47 H 1.09002 * 113.61815 * 105.47097 * 26 6 5 48 48 H 1.08003 * 119.94745 * 179.97438 * 27 5 4 49 49 H 1.08000 * 119.97251 * 179.97438 * 28 27 5 50 50 H 1.08002 * 120.02504 * 180.02562 * 29 28 27 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4311 1.2849 -0.0053 5 6 4.0559 2.5173 0.0001 6 6 5.5607 2.5983 0.0002 7 1 6.0364 1.6381 -0.1996 8 6 6.1155 3.7520 -0.8521 9 6 7.1514 3.9731 0.2628 10 1 7.3482 5.0238 0.4757 11 7 8.3765 3.1886 0.0896 12 6 9.5207 3.7982 -0.2784 13 8 9.5361 4.9963 -0.4667 14 6 10.7807 2.9912 -0.4571 15 8 11.8496 3.8565 -0.8456 16 6 13.0650 3.2830 -1.0487 17 6 14.1476 4.0642 -1.4281 18 35 13.9337 5.9284 -1.6626 19 6 15.3824 3.4782 -1.6345 20 6 15.5389 2.1153 -1.4637 21 6 16.8863 1.4788 -1.6888 22 8 17.8120 1.9664 -0.7155 23 14 16.7338 -0.3711 -1.5288 24 6 14.4615 1.3351 -1.0857 25 6 13.2267 1.9166 -0.8730 26 6 6.1382 3.3291 1.2239 27 6 3.3019 3.6758 0.0058 28 6 1.9208 3.6048 0.0057 29 6 1.2914 2.3753 -0.0007 30 1 -0.3633 0.5139 0.8900 31 1 -0.3633 0.5138 -0.8900 32 1 -0.3633 -1.0277 -0.0005 33 1 4.0207 0.3801 -0.0098 34 1 6.5527 3.4264 -1.7959 35 1 5.4183 4.5813 -0.9710 36 1 8.3641 2.2304 0.2400 37 1 11.0343 2.5006 0.4828 38 1 10.6235 2.2381 -1.2292 39 1 16.2253 4.0853 -1.9302 40 1 17.2439 1.7288 -2.6877 41 1 17.5571 1.7792 0.1983 42 1 18.0560 -1.0105 -1.7480 43 1 16.2168 -0.7234 -0.1819 44 1 14.5867 0.2707 -0.9526 45 1 12.3867 1.3071 -0.5737 46 1 5.4472 4.0429 1.6724 47 1 6.5937 2.6622 1.9559 48 1 3.7921 4.6382 0.0104 49 1 1.3339 4.5113 0.0107 50 1 0.2127 2.3204 -0.0012 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10812630_6201210.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:42:07 Heat of formation + Delta-G solvation = -43.679085 kcal Electronic energy + Delta-G solvation = -33517.055858 eV Core-core repulsion = 28717.344793 eV Total energy + Delta-G solvation = -4799.711066 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 448.076 amu Computer time = 1.64 seconds Orbital eigenvalues (eV) -41.82797 -41.44489 -40.79795 -39.81279 -39.00628 -37.85341 -37.30922 -34.60708 -33.59521 -32.19950 -31.91784 -31.07106 -30.46509 -29.48436 -28.22738 -26.67557 -26.45526 -25.83061 -24.06066 -23.56801 -22.56872 -22.27033 -21.82760 -20.28941 -19.58665 -18.77235 -18.52566 -18.16675 -17.49696 -17.24981 -17.19214 -16.93576 -16.85067 -16.66405 -16.35273 -16.14135 -15.93765 -15.68355 -15.59575 -15.39829 -14.94966 -14.71184 -14.48459 -14.43350 -14.32947 -14.01967 -13.86534 -13.78732 -13.59336 -13.46587 -13.24996 -13.17592 -12.67557 -12.40751 -12.28227 -12.20465 -12.18151 -12.09523 -11.88158 -11.69396 -11.63334 -11.56775 -11.25543 -11.22863 -11.00122 -10.59438 -10.14426 -9.96116 -9.73657 -9.32453 -9.14966 -4.88603 -0.04625 0.12768 0.33370 0.48385 0.65042 1.33982 1.41081 1.45580 1.62139 2.01766 2.35804 2.39814 2.50749 2.74325 3.41598 3.47525 3.48607 3.61459 3.69835 3.74835 3.76795 3.83657 3.88472 3.97410 4.04213 4.10698 4.11256 4.12729 4.19677 4.28442 4.33562 4.34985 4.39653 4.55493 4.58717 4.63718 4.65246 4.67821 4.71646 4.80077 4.85973 4.86436 4.98375 5.01212 5.03879 5.11230 5.15770 5.24358 5.35033 5.46953 5.49896 5.54047 5.71401 5.83027 6.07387 6.44122 6.46605 6.51292 7.15520 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.339 6.339 3 C 0.109 3.891 4 C -0.163 4.163 5 C -0.034 4.034 6 C -0.065 4.065 7 H 0.116 0.884 8 C -0.142 4.142 9 C 0.117 3.883 10 H 0.084 0.916 11 N -0.692 5.692 12 C 0.514 3.486 13 O -0.568 6.568 14 C 0.032 3.968 15 O -0.306 6.306 16 C 0.149 3.851 17 C -0.145 4.145 18 Br -0.055 7.055 19 C -0.035 4.035 20 C -0.149 4.149 21 C -0.084 4.084 22 O -0.551 6.551 23 Si 0.777 3.223 24 C -0.056 4.056 25 C -0.189 4.189 26 C -0.122 4.122 27 C -0.162 4.162 28 C -0.085 4.085 29 C -0.223 4.223 30 H 0.062 0.938 31 H 0.062 0.938 32 H 0.115 0.885 33 H 0.135 0.865 34 H 0.070 0.930 35 H 0.095 0.905 36 H 0.422 0.578 37 H 0.132 0.868 38 H 0.134 0.866 39 H 0.136 0.864 40 H 0.122 0.878 41 H 0.387 0.613 42 H -0.308 1.308 43 H -0.270 1.270 44 H 0.164 0.836 45 H 0.180 0.820 46 H 0.099 0.901 47 H 0.092 0.908 48 H 0.137 0.863 49 H 0.140 0.860 50 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.314 -8.997 1.227 10.521 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.253 6.253 3 C 0.064 3.936 4 C -0.182 4.182 5 C -0.034 4.034 6 C -0.084 4.084 7 H 0.134 0.866 8 C -0.180 4.180 9 C 0.012 3.988 10 H 0.102 0.898 11 N -0.346 5.346 12 C 0.301 3.699 13 O -0.446 6.446 14 C -0.045 4.045 15 O -0.218 6.218 16 C 0.101 3.899 17 C -0.225 4.225 18 Br 0.030 6.970 19 C -0.055 4.055 20 C -0.151 4.151 21 C -0.193 4.193 22 O -0.359 6.359 23 Si 0.682 3.318 24 C -0.074 4.074 25 C -0.208 4.208 26 C -0.160 4.160 27 C -0.180 4.180 28 C -0.103 4.103 29 C -0.241 4.241 30 H 0.081 0.919 31 H 0.080 0.920 32 H 0.134 0.866 33 H 0.153 0.847 34 H 0.089 0.911 35 H 0.114 0.886 36 H 0.260 0.740 37 H 0.149 0.851 38 H 0.152 0.848 39 H 0.154 0.846 40 H 0.140 0.860 41 H 0.236 0.764 42 H -0.237 1.237 43 H -0.196 1.196 44 H 0.181 0.819 45 H 0.197 0.803 46 H 0.117 0.883 47 H 0.111 0.889 48 H 0.155 0.845 49 H 0.158 0.842 50 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges -4.825 -7.920 0.894 9.317 hybrid contribution -0.023 0.297 0.996 1.039 sum -4.848 -7.623 1.889 9.229 Atomic orbital electron populations 1.23285 0.76715 1.05375 1.02051 1.86038 1.23213 1.27277 1.88791 1.19308 0.92945 0.84563 0.96788 1.20518 0.91359 0.98917 1.07379 1.19635 0.95704 0.91745 0.96338 1.21639 0.89734 0.99657 0.97333 0.86575 1.23555 0.97816 0.98783 0.97870 1.21821 0.83309 0.96286 0.97398 0.89823 1.45325 1.07363 1.12496 1.69414 1.20524 0.85336 0.87841 0.76232 1.90794 1.85902 1.17193 1.50672 1.22866 0.83712 0.92538 1.05391 1.86250 1.15940 1.36782 1.82814 1.18807 0.84236 0.92182 0.94636 1.21280 0.95795 0.91113 1.14272 1.96762 1.98126 1.05720 1.96395 1.20889 0.94205 0.95204 0.95188 1.20282 0.96973 0.93252 1.04555 1.25317 0.86916 1.11292 0.95726 1.86593 1.48900 1.80726 1.19684 0.94095 0.81757 0.71466 0.84514 1.21294 0.91246 1.00821 0.94007 1.21560 1.00804 0.91726 1.06690 1.23365 0.96747 0.99851 0.96063 1.21172 0.93790 0.98856 1.04163 1.21230 0.95069 0.97518 0.96529 1.21482 1.00899 0.92482 1.09272 0.91895 0.91971 0.86645 0.84665 0.91093 0.88634 0.73995 0.85087 0.84824 0.84598 0.86026 0.76405 1.23704 1.19578 0.81877 0.80271 0.88269 0.88936 0.84513 0.84172 0.84420 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 9.81 113.37 1.11 1.05 16 2 O -0.34 -1.41 10.50 -92.47 -0.97 -2.38 16 3 C 0.11 0.42 6.69 22.51 0.15 0.57 16 4 C -0.16 -0.29 9.65 22.37 0.22 -0.08 16 5 C -0.03 0.03 5.29 -19.88 -0.11 -0.07 16 6 C -0.07 0.38 3.86 -11.01 -0.04 0.34 16 7 H 0.12 -1.06 8.09 -2.39 -0.02 -1.08 16 8 C -0.14 0.52 7.25 31.12 0.23 0.75 16 9 C 0.12 -0.40 4.32 45.52 0.20 -0.20 16 10 H 0.08 0.18 7.46 -2.38 -0.02 0.16 16 11 N -0.69 4.27 5.26 -440.02 -2.32 1.96 16 12 C 0.51 0.41 7.91 87.66 0.69 1.10 16 13 O -0.57 -7.52 16.10 15.99 0.26 -7.27 16 14 C 0.03 -0.19 5.22 71.24 0.37 0.18 16 15 O -0.31 -1.26 9.01 -73.57 -0.66 -1.92 16 16 C 0.15 0.27 6.68 22.52 0.15 0.42 16 17 C -0.14 -0.78 6.24 22.40 0.14 -0.64 16 18 Br -0.06 -0.53 33.16 -20.37 -0.68 -1.20 16 19 C -0.03 -0.09 9.42 22.27 0.21 0.12 16 20 C -0.15 0.31 5.35 -19.85 -0.11 0.20 16 21 C -0.08 0.23 2.80 71.24 0.20 0.43 16 22 O -0.55 -0.72 12.83 -148.98 -1.91 -2.63 16 23 Si 0.78 -4.38 29.88 68.60 2.05 -2.33 16 24 C -0.06 0.35 8.66 22.26 0.19 0.54 16 25 C -0.19 1.14 9.04 22.36 0.20 1.34 16 26 C -0.12 0.82 7.29 31.12 0.23 1.05 16 27 C -0.16 0.11 8.61 22.28 0.19 0.30 16 28 C -0.09 -0.01 10.04 22.26 0.22 0.21 16 29 C -0.22 -0.36 9.04 22.37 0.20 -0.16 16 30 H 0.06 -0.28 7.66 -2.39 -0.02 -0.30 16 31 H 0.06 -0.27 7.66 -2.39 -0.02 -0.29 16 32 H 0.12 -0.73 8.14 -2.39 -0.02 -0.75 16 33 H 0.14 -0.08 8.05 -2.91 -0.02 -0.10 16 34 H 0.07 -0.16 8.14 -2.39 -0.02 -0.18 16 35 H 0.10 -0.30 6.31 -2.39 -0.02 -0.32 16 36 H 0.42 -5.90 8.70 -92.71 -0.81 -6.71 16 37 H 0.13 -1.70 7.65 -2.38 -0.02 -1.71 16 38 H 0.13 -1.77 7.67 -2.39 -0.02 -1.78 16 39 H 0.14 0.41 8.06 -2.91 -0.02 0.38 16 40 H 0.12 -0.42 7.96 -2.39 -0.02 -0.44 16 41 H 0.39 -1.80 8.70 -74.06 -0.64 -2.44 16 42 H -0.31 -1.05 7.11 99.48 0.71 -0.35 16 43 H -0.27 1.02 7.01 99.48 0.70 1.72 16 44 H 0.16 -1.92 4.83 -2.91 -0.01 -1.94 16 45 H 0.18 -2.59 6.30 -2.91 -0.02 -2.61 16 46 H 0.10 -0.58 7.72 -2.38 -0.02 -0.60 16 47 H 0.09 -0.84 8.14 -2.39 -0.02 -0.86 16 48 H 0.14 -0.50 6.65 -2.91 -0.02 -0.52 16 49 H 0.14 -0.52 8.06 -2.91 -0.02 -0.55 16 50 H 0.14 -0.24 6.30 -2.91 -0.02 -0.26 16 Total: 0.00 -29.84 432.28 0.01 -29.83 By element: Atomic # 1 Polarization: -21.12 SS G_CDS: -0.41 Total: -21.52 kcal Atomic # 6 Polarization: 2.82 SS G_CDS: 4.65 Total: 7.47 kcal Atomic # 7 Polarization: 4.27 SS G_CDS: -2.32 Total: 1.96 kcal Atomic # 8 Polarization: -10.91 SS G_CDS: -3.29 Total: -14.20 kcal Atomic # 14 Polarization: -4.38 SS G_CDS: 2.05 Total: -2.33 kcal Atomic # 35 Polarization: -0.53 SS G_CDS: -0.68 Total: -1.20 kcal Total: -29.84 0.01 -29.83 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10812630_6201210.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -13.851 kcal (2) G-P(sol) polarization free energy of solvation -29.842 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -43.693 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.014 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.829 kcal (6) G-S(sol) free energy of system = (1) + (5) -43.679 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.64 seconds