Wall clock time and date at job start Sat Mar 6 2021 14:42:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35905 * 116.99540 * 2 1 4 4 C 1.38712 * 120.05260 * 180.25590 * 3 2 1 5 5 C 1.38167 * 119.94059 * 180.25476 * 4 3 2 6 6 C 1.50701 * 119.97128 * 179.74849 * 5 4 3 7 7 H 1.08998 * 112.84984 * 10.91161 * 6 5 4 8 8 C 1.54045 * 113.61899 * 142.22960 * 6 5 4 9 9 C 1.53783 * 86.98765 * 139.97856 * 8 6 5 10 10 H 1.09005 * 113.61683 * 219.98734 * 9 8 6 11 11 N 1.46495 * 113.62135 * 89.15628 * 9 8 6 12 12 C 1.34780 * 119.99671 * 105.86312 * 11 9 8 13 13 O 1.21690 * 120.00274 * 0.02562 * 12 11 9 14 14 C 1.46676 * 119.99482 * 180.02562 * 12 11 9 15 15 C 1.37874 * 126.23156 * 179.97438 * 14 12 11 16 16 C 1.39836 * 107.08660 * 180.02562 * 15 14 12 17 17 C 1.35452 * 107.86519 * 359.97438 * 16 15 14 18 18 C 1.50697 * 125.56199 * 179.97438 * 17 16 15 19 19 O 1.42905 * 109.46996 * 245.02460 * 18 17 16 20 20 Si 1.86301 * 109.47403 * 5.02723 * 18 17 16 21 21 N 1.35527 * 108.86991 * 0.23110 * 17 16 15 22 22 C 1.53781 * 113.61115 * 239.72153 * 6 5 4 23 23 C 1.38238 * 120.05469 * 359.46835 * 5 4 3 24 24 C 1.38287 * 120.11374 * 0.27656 * 23 5 4 25 25 C 1.38115 * 120.05623 * 0.02562 * 24 23 5 26 26 H 1.08997 * 109.47429 * 299.99435 * 1 2 3 27 27 H 1.08996 * 109.47652 * 60.00144 * 1 2 3 28 28 H 1.09011 * 109.46723 * 179.97438 * 1 2 3 29 29 H 1.08001 * 120.03035 * 359.97438 * 4 3 2 30 30 H 1.08999 * 113.61508 * 25.47349 * 8 6 5 31 31 H 1.08999 * 113.69678 * 254.48959 * 8 6 5 32 32 H 0.96998 * 120.00243 * 285.87322 * 11 9 8 33 33 H 1.08005 * 126.45786 * 359.97438 * 15 14 12 34 34 H 1.08002 * 126.06920 * 179.97438 * 16 15 14 35 35 H 1.09001 * 109.46613 * 125.02871 * 18 17 16 36 36 H 0.96696 * 114.00036 * 60.00342 * 19 18 17 37 37 H 1.48497 * 109.99842 * 179.97438 * 20 18 17 38 38 H 1.48498 * 109.99736 * 301.31722 * 20 18 17 39 39 H 0.97008 * 125.67728 * 179.75406 * 21 17 16 40 40 H 1.09009 * 113.61294 * 105.46974 * 22 6 5 41 41 H 1.08997 * 113.61871 * 334.56956 * 22 6 5 42 42 H 1.08005 * 119.94704 * 180.25248 * 23 5 4 43 43 H 1.08004 * 119.97119 * 179.97438 * 24 23 5 44 44 H 1.08008 * 120.03235 * 179.97438 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2110 0.0000 4 6 3.4310 1.2850 -0.0054 5 6 4.0558 2.5173 0.0000 6 6 5.5606 2.5984 -0.0001 7 1 6.0363 1.6372 -0.1947 8 6 6.1166 3.7496 -0.8596 9 6 7.1512 3.9745 0.2557 10 1 7.3478 5.0264 0.4632 11 7 8.3763 3.1892 0.0870 12 6 9.5132 3.7919 -0.3139 13 8 9.5222 4.9885 -0.5352 14 6 10.7397 3.0055 -0.4833 15 6 11.9674 3.4869 -0.8857 16 6 12.8465 2.3998 -0.9118 17 6 12.1561 1.2979 -0.5328 18 6 12.7204 -0.0951 -0.4226 19 8 12.0910 -0.9416 -1.3867 20 14 14.5555 -0.0488 -0.7409 21 7 10.8736 1.6515 -0.2742 22 6 6.1378 3.3356 1.2199 23 6 3.3017 3.6759 -0.0005 24 6 1.9206 3.6048 -0.0005 25 6 1.2912 2.3753 0.0005 26 1 -0.3634 0.5137 0.8900 27 1 -0.3634 0.5138 -0.8899 28 1 -0.3633 -1.0278 -0.0005 29 1 4.0206 0.3801 -0.0091 30 1 5.4198 4.5787 -0.9824 31 1 6.5549 3.4206 -1.8018 32 1 8.3692 2.2355 0.2636 33 1 12.2050 4.5107 -1.1347 34 1 13.8907 2.4330 -1.1855 35 1 12.5350 -0.4841 0.5786 36 1 12.2147 -0.6553 -2.3019 37 1 15.1240 -1.4164 -0.6346 38 1 14.8228 0.5095 -2.0907 39 1 10.1678 1.0508 0.0121 40 1 6.5932 2.6724 1.9555 41 1 5.4467 4.0516 1.6646 42 1 3.7919 4.6382 -0.0004 43 1 1.3337 4.5114 -0.0004 44 1 0.2126 2.3203 0.0009 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10812630_6580494.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:42:17 Heat of formation + Delta-G solvation = -3.193923 kcal Electronic energy + Delta-G solvation = -26781.672528 eV Core-core repulsion = 22860.555074 eV Total energy + Delta-G solvation = -3921.117454 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 329.146 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -42.55630 -41.59836 -40.70126 -39.42814 -37.96263 -37.79971 -34.62940 -32.37151 -32.01712 -31.42863 -30.83703 -28.33780 -27.23520 -26.83129 -25.87713 -23.71671 -23.42707 -22.33786 -21.61068 -21.14388 -20.33824 -19.89994 -18.78939 -18.21553 -17.29419 -17.13105 -16.88749 -16.74068 -16.69787 -16.38806 -16.13602 -15.79730 -15.52331 -15.19815 -15.07013 -14.62543 -14.53269 -14.37815 -14.24961 -14.05133 -13.97648 -13.67380 -13.60885 -13.33512 -13.24426 -12.74783 -12.41229 -12.36346 -12.18112 -11.91924 -11.73053 -11.67320 -11.36308 -11.22911 -10.88521 -10.21626 -10.08794 -9.76867 -9.28688 -9.15204 -4.99031 0.30510 0.35042 0.48325 1.09434 1.54745 1.58165 1.81040 1.94786 2.12932 2.28685 2.36235 2.71989 3.18343 3.32460 3.51849 3.57374 3.63086 3.75340 3.80865 3.85436 3.97177 4.10983 4.14889 4.18127 4.20412 4.26084 4.31006 4.39958 4.47366 4.51170 4.55720 4.59409 4.64019 4.72574 4.85405 4.90724 4.98904 5.01780 5.04635 5.08718 5.32442 5.40848 5.47929 5.58711 5.64784 5.77346 5.81610 6.17426 6.21771 6.39921 6.41847 7.10338 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.319 6.319 3 C 0.129 3.871 4 C -0.149 4.149 5 C -0.033 4.033 6 C -0.074 4.074 7 H 0.097 0.903 8 C -0.142 4.142 9 C 0.121 3.879 10 H 0.109 0.891 11 N -0.715 5.715 12 C 0.593 3.407 13 O -0.521 6.521 14 C -0.051 4.051 15 C -0.097 4.097 16 C -0.199 4.199 17 C 0.024 3.976 18 C -0.062 4.062 19 O -0.534 6.534 20 Si 0.718 3.282 21 N -0.524 5.524 22 C -0.134 4.134 23 C -0.154 4.154 24 C -0.076 4.076 25 C -0.212 4.212 26 H 0.056 0.944 27 H 0.056 0.944 28 H 0.101 0.899 29 H 0.128 0.872 30 H 0.099 0.901 31 H 0.075 0.925 32 H 0.395 0.605 33 H 0.153 0.847 34 H 0.151 0.849 35 H 0.119 0.881 36 H 0.380 0.620 37 H -0.256 1.256 38 H -0.255 1.255 39 H 0.416 0.584 40 H 0.077 0.923 41 H 0.102 0.898 42 H 0.126 0.874 43 H 0.126 0.874 44 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.889 -1.571 2.119 2.784 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.232 6.232 3 C 0.084 3.916 4 C -0.168 4.168 5 C -0.033 4.033 6 C -0.093 4.093 7 H 0.115 0.885 8 C -0.181 4.181 9 C 0.016 3.984 10 H 0.127 0.873 11 N -0.366 5.366 12 C 0.381 3.619 13 O -0.396 6.396 14 C -0.164 4.164 15 C -0.123 4.123 16 C -0.224 4.224 17 C -0.094 4.094 18 C -0.171 4.171 19 O -0.341 6.341 20 Si 0.617 3.383 21 N -0.120 5.120 22 C -0.172 4.172 23 C -0.172 4.172 24 C -0.094 4.094 25 C -0.231 4.231 26 H 0.075 0.925 27 H 0.075 0.925 28 H 0.120 0.880 29 H 0.146 0.854 30 H 0.117 0.883 31 H 0.094 0.906 32 H 0.229 0.771 33 H 0.171 0.829 34 H 0.169 0.831 35 H 0.137 0.863 36 H 0.229 0.771 37 H -0.180 1.180 38 H -0.179 1.179 39 H 0.254 0.746 40 H 0.095 0.905 41 H 0.120 0.880 42 H 0.144 0.856 43 H 0.144 0.856 44 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -0.488 -1.559 2.034 2.609 hybrid contribution -1.614 -0.909 -0.722 1.988 sum -2.102 -2.468 1.312 3.498 Atomic orbital electron populations 1.23088 0.78061 1.04213 1.01458 1.86080 1.21646 1.26891 1.88580 1.19036 0.92310 0.84278 0.95968 1.20295 0.91347 0.98165 1.07004 1.19426 0.94624 0.92196 0.97044 1.21658 0.90985 0.99095 0.97526 0.88513 1.23621 0.97944 0.98433 0.98095 1.21875 0.82951 0.97085 0.96538 0.87294 1.45566 1.09426 1.11674 1.69952 1.17040 0.81450 0.86788 0.76617 1.90876 1.84573 1.13841 1.50325 1.20444 0.96713 0.83079 1.16198 1.21342 0.90300 0.99801 1.00884 1.20743 1.00357 0.91665 1.09626 1.21091 0.84819 0.96961 1.06512 1.24908 1.10159 0.85677 0.96357 1.86599 1.75931 1.52300 1.19230 0.94219 0.73808 0.83488 0.86779 1.41954 1.10368 1.07617 1.52078 1.23423 0.97588 1.00007 0.96141 1.20924 0.93651 0.98147 1.04498 1.20952 0.94578 0.97084 0.96790 1.21278 1.00186 0.92455 1.09162 0.92521 0.92534 0.88033 0.85380 0.88285 0.90612 0.77146 0.82905 0.83144 0.86284 0.77124 1.18049 1.17889 0.74648 0.90453 0.87974 0.85637 0.85597 0.85461 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 9.81 101.05 0.99 0.96 16 2 O -0.32 -0.75 10.50 -19.44 -0.20 -0.96 16 3 C 0.13 0.29 6.69 -39.22 -0.26 0.03 16 4 C -0.15 -0.24 9.65 -39.43 -0.38 -0.62 16 5 C -0.03 -0.01 5.29 -104.65 -0.55 -0.57 16 6 C -0.07 0.11 3.87 -90.82 -0.35 -0.24 16 7 H 0.10 -0.21 8.09 -51.93 -0.42 -0.63 16 8 C -0.14 0.13 7.27 -25.78 -0.19 -0.06 16 9 C 0.12 -0.09 4.29 -67.12 -0.29 -0.37 16 10 H 0.11 0.08 7.50 -51.93 -0.39 -0.30 16 11 N -0.72 0.54 5.26 -54.32 -0.29 0.26 16 12 C 0.59 1.38 7.79 -12.85 -0.10 1.28 16 13 O -0.52 -3.19 16.50 5.20 0.09 -3.11 16 14 C -0.05 -0.06 7.06 -81.98 -0.58 -0.64 16 15 C -0.10 -0.14 10.65 -39.12 -0.42 -0.56 16 16 C -0.20 0.04 9.32 -39.98 -0.37 -0.34 16 17 C 0.02 -0.02 6.46 -81.96 -0.53 -0.55 16 18 C -0.06 0.11 3.08 36.00 0.11 0.23 16 19 O -0.53 0.25 12.88 -35.23 -0.45 -0.20 16 20 Si 0.72 -1.64 30.56 -169.99 -5.19 -6.83 16 21 N -0.52 0.58 5.99 -5.70 -0.03 0.54 16 22 C -0.13 0.27 7.29 -25.92 -0.19 0.09 16 23 C -0.15 -0.03 8.61 -39.56 -0.34 -0.37 16 24 C -0.08 -0.03 10.04 -39.61 -0.40 -0.43 16 25 C -0.21 -0.23 9.04 -39.44 -0.36 -0.59 16 26 H 0.06 -0.11 7.66 -51.93 -0.40 -0.51 16 27 H 0.06 -0.11 7.66 -51.93 -0.40 -0.50 16 28 H 0.10 -0.27 8.14 -51.92 -0.42 -0.69 16 29 H 0.13 0.09 8.05 -52.49 -0.42 -0.33 16 30 H 0.10 -0.12 6.31 -51.93 -0.33 -0.45 16 31 H 0.08 0.01 8.14 -51.93 -0.42 -0.42 16 32 H 0.39 -1.29 7.83 -40.82 -0.32 -1.61 16 33 H 0.15 0.19 8.06 -52.48 -0.42 -0.23 16 34 H 0.15 -0.30 6.19 -52.49 -0.32 -0.62 16 35 H 0.12 -0.34 7.96 -51.93 -0.41 -0.76 16 36 H 0.38 -1.08 8.70 45.56 0.40 -0.69 16 37 H -0.26 -0.24 7.11 56.52 0.40 0.16 16 38 H -0.25 0.04 7.11 56.52 0.40 0.44 16 39 H 0.42 -1.41 8.19 -40.82 -0.33 -1.74 16 40 H 0.08 -0.20 8.14 -51.92 -0.42 -0.62 16 41 H 0.10 -0.22 7.72 -51.93 -0.40 -0.62 16 42 H 0.13 -0.18 6.65 -52.48 -0.35 -0.53 16 43 H 0.13 -0.18 8.06 -52.48 -0.42 -0.61 16 44 H 0.13 -0.08 6.30 -52.48 -0.33 -0.41 16 LS Contribution 367.48 15.07 5.54 5.54 Total: 0.00 -8.68 367.48 -10.49 -19.18 By element: Atomic # 1 Polarization: -5.91 SS G_CDS: -5.74 Total: -11.66 kcal Atomic # 6 Polarization: 1.45 SS G_CDS: -4.20 Total: -2.75 kcal Atomic # 7 Polarization: 1.12 SS G_CDS: -0.32 Total: 0.80 kcal Atomic # 8 Polarization: -3.70 SS G_CDS: -0.57 Total: -4.27 kcal Atomic # 14 Polarization: -1.64 SS G_CDS: -5.19 Total: -6.83 kcal Total LS contribution 5.54 Total: 5.54 kcal Total: -8.68 -10.49 -19.18 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10812630_6580494.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 15.983 kcal (2) G-P(sol) polarization free energy of solvation -8.682 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 7.301 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.495 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.177 kcal (6) G-S(sol) free energy of system = (1) + (5) -3.194 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds