Wall clock time and date at job start Sat Mar 6 2021 14:42:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42906 * 1 3 3 C 1.35895 * 117.00165 * 2 1 4 4 C 1.38710 * 120.05591 * 359.97438 * 3 2 1 5 5 C 1.38162 * 119.94555 * 180.02562 * 4 3 2 6 6 C 1.38250 * 120.05331 * 359.97438 * 5 4 3 7 7 C 1.38282 * 120.11004 * 0.04225 * 6 5 4 8 8 C 1.50702 * 119.96921 * 179.97438 * 7 6 5 9 9 H 1.08996 * 112.85489 * 168.80542 * 8 7 6 10 10 C 1.53784 * 113.61199 * 299.99743 * 8 7 6 11 11 C 1.53787 * 87.08341 * 140.06754 * 10 8 7 12 12 H 1.08999 * 113.61389 * 219.93830 * 11 10 8 13 13 N 1.46496 * 113.61356 * 89.11177 * 11 10 8 14 14 C 1.34783 * 119.99795 * 154.99927 * 13 11 10 15 15 O 1.21700 * 119.99693 * 0.02562 * 14 13 11 16 16 C 1.46582 * 119.99912 * 179.97438 * 14 13 11 17 17 C 1.36644 * 125.45603 * 180.02562 * 16 14 13 18 18 C 1.37466 * 113.29764 * 180.23712 * 17 16 14 19 19 C 1.50706 * 122.45349 * 179.71001 * 18 17 16 20 20 C 1.33822 * 115.10015 * 359.49809 * 18 17 16 21 21 C 1.50698 * 124.52237 * 180.23956 * 20 18 17 22 22 O 1.42895 * 109.47349 * 313.60344 * 21 20 18 23 23 Si 1.86299 * 109.47025 * 193.60521 * 21 20 18 24 24 S 1.70611 * 110.95254 * 0.48642 * 20 18 17 25 25 C 1.53778 * 113.69570 * 37.53033 * 8 7 6 26 26 C 1.38119 * 120.06018 * 0.23142 * 7 6 5 27 27 H 1.08997 * 109.46576 * 59.99742 * 1 2 3 28 28 H 1.08996 * 109.47123 * 180.02562 * 1 2 3 29 29 H 1.09000 * 109.46950 * 300.00463 * 1 2 3 30 30 H 1.08002 * 120.03042 * 0.04334 * 4 3 2 31 31 H 1.08002 * 119.97545 * 179.97438 * 5 4 3 32 32 H 1.08007 * 119.93797 * 180.02562 * 6 5 4 33 33 H 1.08998 * 113.61783 * 25.52211 * 10 8 7 34 34 H 1.09007 * 113.61556 * 254.61580 * 10 8 7 35 35 H 0.97002 * 120.00256 * 335.00777 * 13 11 10 36 36 H 1.07998 * 123.35524 * 359.96537 * 17 16 14 37 37 H 1.08998 * 109.47091 * 94.37969 * 19 18 17 38 38 H 1.09001 * 109.47395 * 214.38416 * 19 18 17 39 39 H 1.09006 * 109.46571 * 334.37607 * 19 18 17 40 40 H 1.09004 * 109.46872 * 73.60969 * 21 20 18 41 41 H 0.96705 * 113.99891 * 179.97438 * 22 21 20 42 42 H 1.48498 * 110.00120 * 59.99904 * 23 21 20 43 43 H 1.48501 * 110.00274 * 181.32259 * 23 21 20 44 44 H 1.08997 * 113.61390 * 105.45847 * 25 8 7 45 45 H 1.09008 * 113.61624 * 334.56333 * 25 8 7 46 46 H 1.08003 * 120.02905 * 179.72235 * 26 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0460 1.2108 0.0000 4 6 1.2917 2.3749 -0.0005 5 6 1.9214 3.6047 -0.0011 6 6 3.3021 3.6756 -0.0005 7 6 4.0563 2.5166 -0.0003 8 6 5.5611 2.5976 -0.0003 9 1 6.0368 1.6366 0.1948 10 6 6.1383 3.3340 -1.2208 11 6 7.1532 3.9718 -0.2574 12 1 7.3511 5.0234 -0.4649 13 7 8.3774 3.1848 -0.0894 14 6 9.5229 3.7912 0.2807 15 8 9.5399 4.9924 0.4757 16 6 10.7476 3.0038 0.4493 17 6 11.9651 3.5013 0.8199 18 6 12.9448 2.5400 0.8968 19 6 14.3659 2.8626 1.2808 20 6 12.5432 1.2961 0.6101 21 6 13.4374 0.0833 0.6334 22 8 14.6589 0.3789 -0.0468 23 14 12.5810 -1.3360 -0.2169 24 16 10.8854 1.2676 0.2080 25 6 6.1181 3.7461 0.8573 26 6 3.4316 1.2847 -0.0055 27 1 -0.3632 0.5139 -0.8900 28 1 -0.3633 -1.0276 0.0005 29 1 -0.3633 0.5139 0.8900 30 1 0.2131 2.3200 -0.0002 31 1 1.3346 4.5114 -0.0019 32 1 3.7924 4.6380 -0.0005 33 1 5.4479 4.0510 -1.6649 34 1 6.5923 2.6703 -1.9568 35 1 8.3637 2.2274 -0.2446 36 1 12.1413 4.5464 1.0273 37 1 14.4969 2.7082 2.3518 38 1 15.0470 2.2107 0.7337 39 1 14.5818 3.9022 1.0344 40 1 13.6534 -0.1891 1.6665 41 1 15.2842 -0.3584 -0.0705 42 1 12.2809 -0.9773 -1.6263 43 1 13.4393 -2.5471 -0.1727 44 1 6.5558 3.4151 1.7991 45 1 5.4221 4.5758 0.9814 46 1 4.0211 0.3798 -0.0099 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10812630_6739946.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:42:25 Heat of formation + Delta-G solvation = -16.066362 kcal Electronic energy + Delta-G solvation = -28411.841236 eV Core-core repulsion = 24360.979989 eV Total energy + Delta-G solvation = -4050.861247 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.123 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -41.67599 -40.85902 -40.03875 -39.31180 -37.88858 -37.50159 -34.50416 -32.42641 -31.93637 -30.88995 -30.16686 -28.30237 -27.04881 -26.75710 -25.61722 -24.28467 -23.54078 -22.35757 -21.84378 -20.39046 -19.84495 -19.26918 -18.72775 -18.58964 -17.34760 -17.22511 -17.06461 -16.83614 -16.66204 -16.25369 -16.01023 -15.94044 -15.69963 -15.23300 -14.87534 -14.67793 -14.50392 -14.40874 -14.31739 -14.19138 -14.01715 -13.56357 -13.34513 -13.25382 -13.19711 -13.03176 -12.93646 -12.69643 -12.54878 -12.33524 -12.23594 -12.12773 -11.88490 -11.67011 -11.61103 -11.30165 -11.06346 -10.72332 -10.14485 -9.72138 -9.68252 -9.35664 -9.10755 -5.24125 -0.57119 0.29525 0.35778 0.52935 0.69113 1.04000 1.36391 1.45575 1.78761 2.01319 2.21921 2.32618 2.76882 3.08091 3.40049 3.60256 3.63584 3.68897 3.77879 3.85715 3.91314 4.03238 4.15062 4.15577 4.19278 4.21274 4.26578 4.36201 4.43337 4.51808 4.56808 4.60603 4.61335 4.65528 4.70185 4.77713 4.84258 4.91277 4.93234 4.97938 5.08880 5.09161 5.10839 5.37044 5.43554 5.48790 5.50982 5.53313 5.70243 5.82010 6.25114 6.39191 6.46111 7.14216 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.318 6.318 3 C 0.129 3.871 4 C -0.213 4.213 5 C -0.077 4.077 6 C -0.154 4.154 7 C -0.032 4.032 8 C -0.075 4.075 9 H 0.099 0.901 10 C -0.135 4.135 11 C 0.120 3.880 12 H 0.109 0.891 13 N -0.710 5.710 14 C 0.597 3.403 15 O -0.523 6.523 16 C -0.262 4.262 17 C -0.046 4.046 18 C -0.087 4.087 19 C -0.105 4.105 20 C -0.193 4.193 21 C -0.032 4.032 22 O -0.526 6.526 23 Si 0.649 3.351 24 S 0.200 5.800 25 C -0.142 4.142 26 C -0.149 4.149 27 H 0.056 0.944 28 H 0.101 0.899 29 H 0.056 0.944 30 H 0.127 0.873 31 H 0.125 0.875 32 H 0.125 0.875 33 H 0.101 0.899 34 H 0.078 0.922 35 H 0.399 0.601 36 H 0.155 0.845 37 H 0.067 0.933 38 H 0.091 0.909 39 H 0.065 0.935 40 H 0.088 0.912 41 H 0.383 0.617 42 H -0.236 1.236 43 H -0.237 1.237 44 H 0.077 0.923 45 H 0.098 0.902 46 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.959 -4.372 0.931 4.880 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.232 6.232 3 C 0.084 3.916 4 C -0.232 4.232 5 C -0.095 4.095 6 C -0.172 4.172 7 C -0.032 4.032 8 C -0.093 4.093 9 H 0.118 0.882 10 C -0.173 4.173 11 C 0.015 3.985 12 H 0.127 0.873 13 N -0.361 5.361 14 C 0.383 3.617 15 O -0.400 6.400 16 C -0.382 4.382 17 C -0.080 4.080 18 C -0.100 4.100 19 C -0.163 4.163 20 C -0.312 4.312 21 C -0.144 4.144 22 O -0.334 6.334 23 Si 0.547 3.453 24 S 0.469 5.531 25 C -0.181 4.181 26 C -0.167 4.167 27 H 0.074 0.926 28 H 0.119 0.881 29 H 0.074 0.926 30 H 0.145 0.855 31 H 0.143 0.857 32 H 0.143 0.857 33 H 0.120 0.880 34 H 0.097 0.903 35 H 0.234 0.766 36 H 0.173 0.827 37 H 0.086 0.914 38 H 0.109 0.891 39 H 0.084 0.916 40 H 0.106 0.894 41 H 0.232 0.768 42 H -0.160 1.160 43 H -0.161 1.161 44 H 0.095 0.905 45 H 0.117 0.883 46 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges -3.175 -4.879 -0.110 5.822 hybrid contribution 1.825 0.627 0.296 1.953 sum -1.350 -4.251 0.187 4.464 Atomic orbital electron populations 1.23083 0.78112 1.04176 1.01434 1.86077 1.21595 1.26912 1.88593 1.19035 0.92330 0.84245 0.96007 1.21269 1.00151 0.92479 1.09263 1.20946 0.94591 0.97053 0.96872 1.20927 0.93636 0.98173 1.04502 1.19431 0.94654 0.92172 0.96926 1.21627 0.90926 0.99265 0.97498 0.88230 1.23441 0.97541 1.00049 0.96246 1.21887 0.82930 0.97057 0.96651 0.87287 1.45523 1.08665 1.11396 1.70554 1.16913 0.81689 0.86687 0.76379 1.90858 1.84999 1.13839 1.50321 1.24577 0.98750 0.97436 1.17441 1.20716 0.89810 1.01311 0.96150 1.18697 0.98186 0.91196 1.01944 1.20721 0.91220 1.02665 1.01698 1.23198 0.99195 0.98707 1.10146 1.24025 0.88342 1.00721 1.01306 1.86573 1.27040 1.41264 1.78532 0.95473 0.88707 0.77117 0.84045 1.82625 1.03109 1.03396 1.63985 1.23575 0.97880 0.98476 0.98165 1.20304 0.91300 0.98219 1.06893 0.92559 0.88056 0.92557 0.85525 0.85672 0.85669 0.88033 0.90309 0.76614 0.82696 0.91392 0.89068 0.91597 0.89385 0.76827 1.15983 1.16063 0.90470 0.88337 0.85248 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 9.81 101.05 0.99 0.96 16 2 O -0.32 -0.70 10.50 -19.41 -0.20 -0.91 16 3 C 0.13 0.28 6.69 -39.22 -0.26 0.02 16 4 C -0.21 -0.22 9.04 -39.43 -0.36 -0.58 16 5 C -0.08 -0.03 10.04 -39.60 -0.40 -0.43 16 6 C -0.15 -0.03 8.61 -39.56 -0.34 -0.37 16 7 C -0.03 -0.01 5.29 -104.65 -0.55 -0.56 16 8 C -0.07 0.10 3.85 -90.96 -0.35 -0.25 16 9 H 0.10 -0.22 8.09 -51.93 -0.42 -0.64 16 10 C -0.13 0.23 7.29 -25.91 -0.19 0.04 16 11 C 0.12 -0.03 4.32 -67.12 -0.29 -0.32 16 12 H 0.11 0.13 7.46 -51.93 -0.39 -0.26 16 13 N -0.71 -0.11 5.26 -54.35 -0.29 -0.39 16 14 C 0.60 1.86 7.78 -12.89 -0.10 1.76 16 15 O -0.52 -3.49 16.44 5.19 0.09 -3.41 16 16 C -0.26 -0.54 6.45 -36.79 -0.24 -0.78 16 17 C -0.05 -0.11 9.78 -40.44 -0.40 -0.51 16 18 C -0.09 -0.15 5.75 -106.45 -0.61 -0.77 16 19 C -0.10 -0.07 9.76 36.01 0.35 0.29 16 20 C -0.19 -0.15 5.65 -35.86 -0.20 -0.36 16 21 C -0.03 0.03 2.67 36.00 0.10 0.13 16 22 O -0.53 0.26 10.24 -35.23 -0.36 -0.10 16 23 Si 0.65 -1.10 30.96 -169.99 -5.26 -6.36 16 24 S 0.20 -0.09 19.33 -107.50 -2.08 -2.17 16 25 C -0.14 0.12 7.25 -25.92 -0.19 -0.07 16 26 C -0.15 -0.22 9.65 -39.43 -0.38 -0.60 16 27 H 0.06 -0.11 7.66 -51.93 -0.40 -0.51 16 28 H 0.10 -0.28 8.14 -51.93 -0.42 -0.70 16 29 H 0.06 -0.11 7.66 -51.93 -0.40 -0.51 16 30 H 0.13 -0.08 6.30 -52.49 -0.33 -0.41 16 31 H 0.13 -0.18 8.06 -52.49 -0.42 -0.60 16 32 H 0.13 -0.17 6.66 -52.48 -0.35 -0.52 16 33 H 0.10 -0.20 7.72 -51.93 -0.40 -0.60 16 34 H 0.08 -0.17 8.14 -51.92 -0.42 -0.59 16 35 H 0.40 -0.81 7.81 -40.82 -0.32 -1.13 16 36 H 0.16 0.34 8.06 -52.49 -0.42 -0.08 16 37 H 0.07 -0.01 8.14 -51.93 -0.42 -0.44 16 38 H 0.09 0.09 5.51 -51.93 -0.29 -0.20 16 39 H 0.07 0.02 8.11 -51.93 -0.42 -0.40 16 40 H 0.09 -0.25 7.96 -51.93 -0.41 -0.66 16 41 H 0.38 -1.72 8.74 45.56 0.40 -1.32 16 42 H -0.24 -0.33 7.11 56.52 0.40 0.07 16 43 H -0.24 0.06 7.11 56.52 0.40 0.46 16 44 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 45 H 0.10 -0.12 6.32 -51.92 -0.33 -0.45 16 46 H 0.13 0.05 8.05 -52.48 -0.42 -0.37 16 LS Contribution 389.37 15.07 5.87 5.87 Total: 0.00 -8.29 389.37 -11.86 -20.16 By element: Atomic # 1 Polarization: -4.08 SS G_CDS: -6.21 Total: -10.29 kcal Atomic # 6 Polarization: 1.02 SS G_CDS: -3.42 Total: -2.40 kcal Atomic # 7 Polarization: -0.11 SS G_CDS: -0.29 Total: -0.39 kcal Atomic # 8 Polarization: -3.94 SS G_CDS: -0.48 Total: -4.42 kcal Atomic # 14 Polarization: -1.10 SS G_CDS: -5.26 Total: -6.36 kcal Atomic # 16 Polarization: -0.09 SS G_CDS: -2.08 Total: -2.17 kcal Total LS contribution 5.87 Total: 5.87 kcal Total: -8.29 -11.86 -20.16 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10812630_6739946.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 4.093 kcal (2) G-P(sol) polarization free energy of solvation -8.295 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -4.202 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.865 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.159 kcal (6) G-S(sol) free energy of system = (1) + (5) -16.066 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds