Wall clock time and date at job start Sat Mar 6 2021 14:42:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35902 * 117.00120 * 2 1 4 4 C 1.38708 * 120.05097 * 180.29448 * 3 2 1 5 5 C 1.38167 * 119.93875 * 180.21033 * 4 3 2 6 6 C 1.50698 * 119.97381 * 179.78989 * 5 4 3 7 7 H 1.08999 * 112.90521 * 10.98325 * 6 5 4 8 8 C 1.53781 * 113.61565 * 142.22981 * 6 5 4 9 9 C 1.54049 * 87.08031 * 139.97986 * 8 6 5 10 10 H 1.08992 * 113.69868 * 220.05225 * 9 8 6 11 11 N 1.46506 * 113.61276 * 89.07129 * 9 8 6 12 12 C 1.34772 * 120.00033 * 107.61836 * 11 9 8 13 13 O 1.21642 * 119.99866 * 0.02562 * 12 11 9 14 14 C 1.47183 * 120.00445 * 180.02562 * 12 11 9 15 15 C 1.36013 * 123.45804 * 0.02800 * 14 12 11 16 16 S 1.70446 * 110.81518 * 179.97438 * 15 14 12 17 17 C 1.75504 * 92.44743 * 359.97438 * 16 15 14 18 18 C 1.50698 * 124.71284 * 180.02562 * 17 16 15 19 19 O 1.42902 * 109.47328 * 244.98011 * 18 17 16 20 20 Si 1.86308 * 109.46922 * 4.98224 * 18 17 16 21 21 C 1.32773 * 110.57264 * 359.73967 * 17 16 15 22 22 C 1.53781 * 113.61793 * 239.72896 * 6 5 4 23 23 C 1.38247 * 120.05557 * 359.52099 * 5 4 3 24 24 C 1.38286 * 120.11126 * 0.22726 * 23 5 4 25 25 C 1.38123 * 120.05628 * 0.02562 * 24 23 5 26 26 H 1.09005 * 109.47106 * 59.99845 * 1 2 3 27 27 H 1.09005 * 109.47510 * 179.97438 * 1 2 3 28 28 H 1.09004 * 109.47138 * 299.99946 * 1 2 3 29 29 H 1.07998 * 120.03675 * 359.97438 * 4 3 2 30 30 H 1.09005 * 113.61471 * 254.53569 * 8 6 5 31 31 H 1.08996 * 113.61178 * 25.34912 * 8 6 5 32 32 H 0.97002 * 119.99888 * 287.62233 * 11 9 8 33 33 H 1.08002 * 124.59482 * 359.97438 * 15 14 12 34 34 H 1.09006 * 109.47014 * 124.97719 * 18 17 16 35 35 H 0.96698 * 113.99255 * 180.02562 * 19 18 17 36 36 H 1.48503 * 109.99931 * 299.99466 * 20 18 17 37 37 H 1.48493 * 110.00248 * 61.31856 * 20 18 17 38 38 H 1.08001 * 123.45558 * 180.22820 * 21 17 16 39 39 H 1.09002 * 113.61445 * 334.56799 * 22 6 5 40 40 H 1.09002 * 113.61408 * 105.38530 * 22 6 5 41 41 H 1.07999 * 119.94455 * 180.24921 * 23 5 4 42 42 H 1.08001 * 119.97129 * 180.02562 * 24 23 5 43 43 H 1.08003 * 120.02668 * 180.02562 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4311 1.2847 -0.0062 5 6 4.0560 2.5170 -0.0018 6 6 5.5608 2.5980 -0.0037 7 1 6.0371 1.6375 -0.1999 8 6 6.1147 3.7471 -0.8625 9 6 7.1535 3.9744 0.2521 10 1 7.3501 5.0262 0.4598 11 7 8.3780 3.1882 0.0823 12 6 9.5228 3.7953 -0.2880 13 8 9.5394 4.9963 -0.4809 14 6 10.7528 3.0054 -0.4592 15 6 10.8140 1.6609 -0.2630 16 16 12.3897 1.0779 -0.5502 17 6 12.9907 2.6785 -0.9465 18 6 14.4126 2.9888 -1.3377 19 8 15.0096 3.8221 -0.3421 20 14 15.3779 1.4016 -1.4796 21 6 12.0172 3.5772 -0.8596 22 6 6.1396 3.3351 1.2156 23 6 3.3019 3.6757 -0.0012 24 6 1.9209 3.6047 -0.0003 25 6 1.2914 2.3752 0.0005 26 1 -0.3633 0.5139 -0.8900 27 1 -0.3634 -1.0277 -0.0005 28 1 -0.3633 0.5138 0.8900 29 1 4.0206 0.3798 -0.0106 30 1 6.5509 3.4166 -1.8053 31 1 5.4169 4.5752 -0.9864 32 1 8.3647 2.2306 0.2364 33 1 9.9775 1.0459 0.0344 34 1 14.4208 3.5060 -2.2972 35 1 15.9274 4.0624 -0.5293 36 1 15.3744 0.6869 -0.1780 37 1 14.7861 0.5397 -2.5341 38 1 12.1574 4.6285 -1.0635 39 1 5.4492 4.0513 1.6611 40 1 6.5946 2.6719 1.9512 41 1 3.7923 4.6379 -0.0018 42 1 1.3340 4.5113 -0.0003 43 1 0.2128 2.3203 0.0008 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10812630_6894386.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:42:28 Heat of formation + Delta-G solvation = -13.286346 kcal Electronic energy + Delta-G solvation = -26296.931272 eV Core-core repulsion = 22401.728195 eV Total energy + Delta-G solvation = -3895.203077 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.107 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -41.71458 -40.91858 -39.85640 -38.62197 -37.84937 -37.10593 -34.54311 -32.31520 -31.74285 -30.84094 -28.31722 -26.98050 -26.78289 -26.60581 -25.12940 -23.57335 -22.42280 -21.96173 -20.49167 -20.34481 -18.78822 -18.67065 -18.42162 -18.06113 -17.25406 -17.00055 -16.76185 -16.68261 -16.32738 -16.04618 -15.78376 -15.69740 -15.31430 -14.84969 -14.46994 -14.42791 -14.26999 -14.04548 -13.91111 -13.81864 -13.72216 -13.51966 -13.32718 -13.18680 -12.72976 -12.66035 -12.37754 -12.28998 -12.14439 -12.06730 -11.69024 -11.62877 -11.31518 -10.90405 -10.49095 -10.12647 -9.98223 -9.74168 -9.51980 -9.13036 -5.31397 -0.38032 0.33338 0.35508 0.50619 0.70592 0.90011 1.12471 1.50993 1.81755 2.05090 2.30546 2.35097 2.74604 3.26075 3.38612 3.60562 3.64037 3.67538 3.81828 3.83417 3.88727 3.97441 4.00872 4.13395 4.17063 4.19517 4.24940 4.33062 4.33843 4.49752 4.54815 4.58799 4.63618 4.68417 4.69961 4.78903 4.89849 4.95536 5.01349 5.07929 5.09343 5.21370 5.34710 5.48244 5.52945 5.68179 5.79715 6.43720 6.44046 6.51391 7.20890 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.319 6.319 3 C 0.129 3.871 4 C -0.149 4.149 5 C -0.032 4.032 6 C -0.074 4.074 7 H 0.098 0.902 8 C -0.143 4.143 9 C 0.120 3.880 10 H 0.109 0.891 11 N -0.709 5.709 12 C 0.583 3.417 13 O -0.528 6.528 14 C -0.154 4.154 15 C -0.203 4.203 16 S 0.177 5.823 17 C -0.198 4.198 18 C -0.035 4.035 19 O -0.542 6.542 20 Si 0.670 3.330 21 C -0.049 4.049 22 C -0.134 4.134 23 C -0.154 4.154 24 C -0.076 4.076 25 C -0.212 4.212 26 H 0.056 0.944 27 H 0.101 0.899 28 H 0.056 0.944 29 H 0.128 0.872 30 H 0.075 0.925 31 H 0.098 0.902 32 H 0.399 0.601 33 H 0.172 0.828 34 H 0.085 0.915 35 H 0.385 0.615 36 H -0.234 1.234 37 H -0.238 1.238 38 H 0.159 0.841 39 H 0.101 0.899 40 H 0.077 0.923 41 H 0.126 0.874 42 H 0.126 0.874 43 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.029 -2.619 -0.923 2.962 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.232 6.232 3 C 0.084 3.916 4 C -0.168 4.168 5 C -0.032 4.032 6 C -0.093 4.093 7 H 0.116 0.884 8 C -0.181 4.181 9 C 0.015 3.985 10 H 0.127 0.873 11 N -0.360 5.360 12 C 0.369 3.631 13 O -0.405 6.405 14 C -0.173 4.173 15 C -0.341 4.341 16 S 0.443 5.557 17 C -0.314 4.314 18 C -0.148 4.148 19 O -0.349 6.349 20 Si 0.569 3.431 21 C -0.078 4.078 22 C -0.172 4.172 23 C -0.172 4.172 24 C -0.094 4.094 25 C -0.231 4.231 26 H 0.075 0.925 27 H 0.120 0.880 28 H 0.075 0.925 29 H 0.146 0.854 30 H 0.094 0.906 31 H 0.116 0.884 32 H 0.234 0.766 33 H 0.189 0.811 34 H 0.103 0.897 35 H 0.233 0.767 36 H -0.157 1.157 37 H -0.162 1.162 38 H 0.176 0.824 39 H 0.119 0.881 40 H 0.096 0.904 41 H 0.144 0.856 42 H 0.144 0.856 43 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges 1.165 -4.334 -0.659 4.536 hybrid contribution -1.664 1.221 0.019 2.063 sum -0.499 -3.114 -0.639 3.218 Atomic orbital electron populations 1.23088 0.78081 1.04197 1.01451 1.86077 1.21631 1.26914 1.88594 1.19032 0.92312 0.84259 0.95998 1.20294 0.91328 0.98177 1.06994 1.19438 0.94660 0.92183 0.96945 1.21609 0.90915 0.99161 0.97583 0.88421 1.23622 0.97933 0.98425 0.98130 1.21917 0.83021 0.97123 0.96462 0.87338 1.45500 1.08604 1.11484 1.70456 1.17556 0.82307 0.86933 0.76334 1.90824 1.85377 1.14283 1.50024 1.20215 0.95283 0.92529 1.09244 1.25805 1.03815 0.98692 1.05742 1.83192 1.00132 1.08671 1.63744 1.23423 0.98725 0.96751 1.12487 1.23997 0.91883 1.05181 0.93704 1.86526 1.31438 1.70364 1.46593 0.94712 0.89296 0.76188 0.82897 1.21042 0.88897 1.00968 0.96865 1.23427 0.97589 1.00007 0.96190 1.20928 0.93645 0.98166 1.04491 1.20950 0.94577 0.97074 0.96818 1.21272 1.00167 0.92461 1.09220 0.92544 0.88040 0.92532 0.85356 0.90609 0.88361 0.76578 0.81054 0.89699 0.76692 1.15714 1.16220 0.82380 0.88071 0.90425 0.85645 0.85621 0.85481 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 9.81 101.05 0.99 0.97 16 2 O -0.32 -0.80 10.50 -19.43 -0.20 -1.01 16 3 C 0.13 0.32 6.69 -39.22 -0.26 0.06 16 4 C -0.15 -0.28 9.65 -39.43 -0.38 -0.66 16 5 C -0.03 -0.02 5.29 -104.65 -0.55 -0.58 16 6 C -0.07 0.08 3.86 -90.96 -0.35 -0.28 16 7 H 0.10 -0.18 8.09 -51.93 -0.42 -0.60 16 8 C -0.14 0.06 7.26 -25.78 -0.19 -0.12 16 9 C 0.12 0.01 4.34 -66.97 -0.29 -0.29 16 10 H 0.11 0.18 7.46 -51.93 -0.39 -0.21 16 11 N -0.71 -0.18 5.23 -54.03 -0.28 -0.47 16 12 C 0.58 2.03 7.79 -12.63 -0.10 1.94 16 13 O -0.53 -3.81 16.40 5.24 0.09 -3.73 16 14 C -0.15 -0.39 5.98 -104.63 -0.63 -1.01 16 15 C -0.20 -0.05 10.38 29.93 0.31 0.26 16 16 S 0.18 0.18 20.20 -107.50 -2.17 -2.00 16 17 C -0.20 -0.41 5.69 -36.18 -0.21 -0.62 16 18 C -0.03 0.01 2.93 36.00 0.11 0.12 16 19 O -0.54 -0.08 12.86 -35.23 -0.45 -0.53 16 20 Si 0.67 -1.08 30.92 -169.99 -5.26 -6.34 16 21 C -0.05 -0.15 9.95 -39.02 -0.39 -0.54 16 22 C -0.13 0.19 7.28 -25.92 -0.19 0.00 16 23 C -0.15 -0.08 8.60 -39.56 -0.34 -0.42 16 24 C -0.08 -0.05 10.04 -39.61 -0.40 -0.45 16 25 C -0.21 -0.28 9.04 -39.44 -0.36 -0.63 16 26 H 0.06 -0.10 7.66 -51.93 -0.40 -0.50 16 27 H 0.10 -0.26 8.14 -51.93 -0.42 -0.68 16 28 H 0.06 -0.10 7.66 -51.93 -0.40 -0.50 16 29 H 0.13 0.12 8.05 -52.49 -0.42 -0.31 16 30 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 31 H 0.10 -0.08 6.31 -51.93 -0.33 -0.41 16 32 H 0.40 -0.92 7.20 -40.82 -0.29 -1.22 16 33 H 0.17 -0.52 7.01 -52.49 -0.37 -0.89 16 34 H 0.09 -0.17 7.96 -51.93 -0.41 -0.58 16 35 H 0.38 -1.96 8.74 45.56 0.40 -1.56 16 36 H -0.23 -0.27 7.11 56.52 0.40 0.13 16 37 H -0.24 -0.10 7.11 56.52 0.40 0.30 16 38 H 0.16 0.55 8.06 -52.49 -0.42 0.13 16 39 H 0.10 -0.16 7.72 -51.93 -0.40 -0.56 16 40 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 41 H 0.13 -0.13 6.65 -52.49 -0.35 -0.48 16 42 H 0.13 -0.15 8.06 -52.49 -0.42 -0.58 16 43 H 0.13 -0.05 6.30 -52.48 -0.33 -0.39 16 LS Contribution 372.27 15.07 5.61 5.61 Total: 0.00 -9.25 372.27 -11.31 -20.56 By element: Atomic # 1 Polarization: -4.42 SS G_CDS: -5.42 Total: -9.85 kcal Atomic # 6 Polarization: 0.97 SS G_CDS: -3.22 Total: -2.25 kcal Atomic # 7 Polarization: -0.18 SS G_CDS: -0.28 Total: -0.47 kcal Atomic # 8 Polarization: -4.70 SS G_CDS: -0.57 Total: -5.27 kcal Atomic # 14 Polarization: -1.08 SS G_CDS: -5.26 Total: -6.34 kcal Atomic # 16 Polarization: 0.18 SS G_CDS: -2.17 Total: -2.00 kcal Total LS contribution 5.61 Total: 5.61 kcal Total: -9.25 -11.31 -20.56 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10812630_6894386.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 7.272 kcal (2) G-P(sol) polarization free energy of solvation -9.246 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -1.974 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.312 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.559 kcal (6) G-S(sol) free energy of system = (1) + (5) -13.286 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds