Wall clock time and date at job start Sat Mar 6 2021 14:42:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.35907 * 116.99548 * 2 1 4 4 C 1.38707 * 120.06038 * 359.97438 * 3 2 1 5 5 C 1.38165 * 119.94718 * 180.02562 * 4 3 2 6 6 C 1.38244 * 120.05153 * 359.97438 * 5 4 3 7 7 C 1.38288 * 120.11598 * 0.02562 * 6 5 4 8 8 C 1.50699 * 119.97166 * 179.97438 * 7 6 5 9 9 H 1.09003 * 112.90562 * 191.25333 * 8 7 6 10 10 C 1.53778 * 113.61728 * 322.50635 * 8 7 6 11 11 C 1.54051 * 87.07707 * 139.97665 * 10 8 7 12 12 H 1.08997 * 113.69529 * 220.05024 * 11 10 8 13 13 N 1.46502 * 113.60950 * 89.07291 * 11 10 8 14 14 C 1.34778 * 120.00000 * 107.62076 * 13 11 10 15 15 O 1.21559 * 119.99805 * 359.97438 * 14 13 11 16 16 C 1.47844 * 120.00155 * 179.97438 * 14 13 11 17 17 C 1.39559 * 120.14235 * 353.74387 * 16 14 13 18 18 C 1.37982 * 119.84754 * 179.74382 * 17 16 14 19 19 C 1.50697 * 119.92283 * 180.27323 * 18 17 16 20 20 O 1.42903 * 109.47045 * 105.25908 * 19 18 17 21 21 Si 1.86294 * 109.47402 * 345.25635 * 19 18 17 22 22 C 1.38331 * 120.14832 * 0.52973 * 18 17 16 23 23 C 1.50695 * 119.85721 * 179.72039 * 22 18 17 24 24 C 1.38386 * 120.28977 * 359.74390 * 22 18 17 25 25 C 1.37932 * 120.14990 * 359.97438 * 24 22 18 26 26 C 1.50692 * 120.07845 * 179.97438 * 25 24 22 27 27 C 1.53777 * 113.61284 * 60.00425 * 8 7 6 28 28 C 1.38127 * 120.05296 * 0.27740 * 7 6 5 29 29 H 1.08997 * 109.46860 * 299.99833 * 1 2 3 30 30 H 1.08997 * 109.46597 * 59.99985 * 1 2 3 31 31 H 1.08997 * 109.46492 * 179.97438 * 1 2 3 32 32 H 1.08004 * 120.02913 * 0.04651 * 4 3 2 33 33 H 1.07994 * 119.97465 * 180.02562 * 5 4 3 34 34 H 1.08003 * 119.94026 * 180.02562 * 6 5 4 35 35 H 1.08998 * 113.61118 * 254.52952 * 10 8 7 36 36 H 1.08998 * 113.61127 * 25.42874 * 10 8 7 37 37 H 0.96998 * 119.99834 * 287.61282 * 13 11 10 38 38 H 1.07993 * 120.07264 * 0.02562 * 17 16 14 39 39 H 1.09000 * 109.47183 * 225.25430 * 19 18 17 40 40 H 0.96701 * 113.99887 * 299.99929 * 20 19 18 41 41 H 1.48503 * 110.00266 * 58.68267 * 21 19 18 42 42 H 1.48506 * 110.00244 * 180.02562 * 21 19 18 43 43 H 1.09001 * 109.47606 * 270.02193 * 23 22 18 44 44 H 1.09001 * 109.46915 * 30.02685 * 23 22 18 45 45 H 1.09010 * 109.47446 * 150.02129 * 23 22 18 46 46 H 1.08006 * 119.92844 * 179.97438 * 24 22 18 47 47 H 1.08995 * 109.47576 * 263.43404 * 26 25 24 48 48 H 1.09009 * 109.47105 * 23.43273 * 26 25 24 49 49 H 1.09001 * 109.47346 * 143.42990 * 26 25 24 50 50 H 1.08996 * 113.61750 * 334.56505 * 27 8 7 51 51 H 1.09004 * 113.61668 * 105.38393 * 27 8 7 52 52 H 1.07997 * 120.02631 * 179.72620 * 28 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0460 1.2110 0.0000 4 6 1.2916 2.3750 -0.0005 5 6 1.9212 3.6049 -0.0011 6 6 3.3018 3.6759 -0.0005 7 6 4.0562 2.5169 0.0000 8 6 5.5610 2.5980 0.0000 9 1 6.0377 1.6374 -0.1955 10 6 6.1160 3.7471 -0.8581 11 6 7.1533 3.9744 0.2579 12 1 7.3495 5.0262 0.4659 13 7 8.3780 3.1882 0.0897 14 6 9.5233 3.7955 -0.2790 15 8 9.5399 4.9955 -0.4725 16 6 10.7593 3.0022 -0.4482 17 6 10.7773 1.6503 -0.1023 18 6 11.9327 0.9144 -0.2677 19 6 11.9522 -0.5470 0.0996 20 8 11.9291 -1.3376 -1.0906 21 14 10.4588 -0.9461 1.1393 22 6 13.0746 1.5164 -0.7648 23 6 14.3347 0.7079 -0.9369 24 6 13.0651 2.8579 -1.1045 25 6 11.9151 3.6036 -0.9495 26 6 11.9067 5.0644 -1.3193 27 6 6.1381 3.3351 1.2200 28 6 3.4315 1.2849 -0.0058 29 1 -0.3633 0.5138 0.8900 30 1 -0.3632 0.5138 -0.8900 31 1 -0.3632 -1.0277 -0.0005 32 1 0.2130 2.3201 -0.0002 33 1 1.3344 4.5115 -0.0011 34 1 3.7921 4.6382 -0.0005 35 1 6.5534 3.4166 -1.8002 36 1 5.4188 4.5758 -0.9817 37 1 8.3645 2.2307 0.2438 38 1 9.8876 1.1802 0.2897 39 1 12.8578 -0.7676 0.6646 40 1 11.1493 -1.1928 -1.6439 41 1 9.2177 -0.6199 0.3920 42 1 10.4667 -2.3845 1.5086 43 1 14.9257 0.7571 -0.0224 44 1 14.0748 -0.3297 -1.1463 45 1 14.9150 1.1117 -1.7667 46 1 13.9601 3.3221 -1.4917 47 1 12.0769 5.6662 -0.4266 48 1 12.6961 5.2600 -2.0452 49 1 10.9413 5.3237 -1.7538 50 1 5.4471 4.0512 1.6646 51 1 6.5922 2.6719 1.9563 52 1 4.0211 0.3801 -0.0098 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10812630_9599494.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:42:36 Heat of formation + Delta-G solvation = -19.561137 kcal Electronic energy + Delta-G solvation = -32750.137201 eV Core-core repulsion = 28454.434544 eV Total energy + Delta-G solvation = -4295.702657 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.182 amu Computer time = 1.33 seconds Orbital eigenvalues (eV) -41.92739 -41.30328 -40.50366 -39.50863 -37.98575 -37.63557 -34.93751 -34.38864 -33.17320 -32.07912 -30.96140 -29.30448 -28.54147 -28.24223 -26.69073 -26.10292 -25.50954 -23.76991 -23.58043 -22.92301 -22.09944 -21.06351 -20.21770 -19.18966 -18.71246 -17.60047 -17.42930 -17.24802 -16.94031 -16.69297 -16.63935 -16.42896 -16.25930 -16.16717 -15.83484 -15.60728 -15.37665 -14.90960 -14.64722 -14.58631 -14.45686 -14.29988 -14.06108 -14.03432 -13.86667 -13.48716 -13.44153 -13.21290 -13.17294 -13.06389 -12.82823 -12.71816 -12.67055 -12.52821 -12.28538 -12.12149 -11.96136 -11.79666 -11.65597 -11.58505 -11.26763 -10.71306 -10.58035 -10.17964 -9.89622 -9.76759 -9.60401 -9.17220 -4.94464 -0.24852 0.17332 0.30912 0.46083 1.27874 1.52262 1.72009 1.94024 2.02171 2.33217 2.63794 2.72239 3.41206 3.44357 3.47582 3.60148 3.68075 3.70239 3.72857 3.82819 3.86062 3.94975 4.07210 4.15488 4.17382 4.24126 4.25828 4.32822 4.36919 4.50662 4.52795 4.55298 4.57879 4.61025 4.65104 4.68884 4.70504 4.78484 4.79690 4.81425 4.85076 4.92576 4.95316 5.01201 5.04917 5.08090 5.13108 5.18483 5.28950 5.32476 5.47425 5.49291 5.51009 5.55140 5.69072 5.80993 5.81580 6.41671 6.42558 6.48351 7.12903 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.341 6.341 3 C 0.109 3.891 4 C -0.222 4.222 5 C -0.083 4.083 6 C -0.159 4.159 7 C -0.033 4.033 8 C -0.072 4.072 9 H 0.103 0.897 10 C -0.140 4.140 11 C 0.118 3.882 12 H 0.096 0.904 13 N -0.701 5.701 14 C 0.560 3.440 15 O -0.559 6.559 16 C -0.159 4.159 17 C -0.074 4.074 18 C -0.134 4.134 19 C -0.077 4.077 20 O -0.542 6.542 21 Si 0.748 3.252 22 C -0.028 4.028 23 C -0.127 4.127 24 C -0.136 4.136 25 C -0.024 4.024 26 C -0.119 4.119 27 C -0.123 4.123 28 C -0.168 4.168 29 H 0.064 0.936 30 H 0.062 0.938 31 H 0.114 0.886 32 H 0.140 0.860 33 H 0.144 0.856 34 H 0.141 0.859 35 H 0.064 0.936 36 H 0.103 0.897 37 H 0.409 0.591 38 H 0.144 0.856 39 H 0.126 0.874 40 H 0.386 0.614 41 H -0.264 1.264 42 H -0.300 1.300 43 H 0.088 0.912 44 H 0.077 0.923 45 H 0.075 0.925 46 H 0.145 0.855 47 H 0.072 0.928 48 H 0.072 0.928 49 H 0.077 0.923 50 H 0.107 0.893 51 H 0.089 0.911 52 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.362 -0.737 2.449 2.897 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.255 6.255 3 C 0.064 3.936 4 C -0.240 4.240 5 C -0.101 4.101 6 C -0.177 4.177 7 C -0.033 4.033 8 C -0.090 4.090 9 H 0.121 0.879 10 C -0.179 4.179 11 C 0.012 3.988 12 H 0.114 0.886 13 N -0.353 5.353 14 C 0.350 3.650 15 O -0.439 6.439 16 C -0.162 4.162 17 C -0.092 4.092 18 C -0.134 4.134 19 C -0.186 4.186 20 O -0.350 6.350 21 Si 0.653 3.347 22 C -0.029 4.029 23 C -0.183 4.183 24 C -0.154 4.154 25 C -0.025 4.025 26 C -0.175 4.175 27 C -0.161 4.161 28 C -0.186 4.186 29 H 0.082 0.918 30 H 0.081 0.919 31 H 0.133 0.867 32 H 0.158 0.842 33 H 0.162 0.838 34 H 0.159 0.841 35 H 0.083 0.917 36 H 0.121 0.879 37 H 0.246 0.754 38 H 0.162 0.838 39 H 0.144 0.856 40 H 0.235 0.765 41 H -0.190 1.190 42 H -0.228 1.228 43 H 0.106 0.894 44 H 0.096 0.904 45 H 0.094 0.906 46 H 0.163 0.837 47 H 0.090 0.910 48 H 0.091 0.909 49 H 0.096 0.904 50 H 0.125 0.875 51 H 0.108 0.892 52 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges -1.464 -0.761 2.627 3.102 hybrid contribution -0.582 -0.602 -1.269 1.520 sum -2.045 -1.364 1.359 2.809 Atomic orbital electron populations 1.23292 0.76640 1.05360 1.02134 1.86042 1.23298 1.27334 1.88801 1.19288 0.92788 0.84682 0.96804 1.21488 1.00932 0.92403 1.09193 1.21253 0.95001 0.97548 0.96269 1.21177 0.93789 0.98743 1.03983 1.19599 0.95427 0.91882 0.96414 1.21617 0.90026 0.99363 0.97988 0.87927 1.23612 0.97943 0.98738 0.97594 1.21919 0.83059 0.96611 0.97183 0.88576 1.45554 1.08238 1.12057 1.69406 1.18422 0.83649 0.86933 0.76029 1.90737 1.85978 1.15838 1.51344 1.19643 0.94080 0.94516 1.07926 1.21305 0.98293 0.92442 0.97157 1.20071 0.93604 0.96661 1.03057 1.25117 1.13765 0.87168 0.92550 1.86582 1.48437 1.65125 1.34873 0.94251 0.74406 0.80718 0.85325 1.20228 0.95783 0.93650 0.93208 1.21010 0.93775 1.00121 1.03392 1.21199 0.98183 0.93620 1.02419 1.20219 0.92014 0.96850 0.93432 1.21028 1.03647 0.90825 1.01990 1.23387 0.96890 0.99915 0.95898 1.20494 0.91514 0.98823 1.07816 0.91755 0.91904 0.86727 0.84243 0.83798 0.84094 0.91688 0.87876 0.75410 0.83838 0.85591 0.76506 1.19004 1.22835 0.89369 0.90401 0.90614 0.83706 0.90954 0.90899 0.90437 0.87474 0.89214 0.85353 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.04 9.81 113.37 1.11 1.07 16 2 O -0.34 -1.93 10.50 -92.50 -0.97 -2.90 16 3 C 0.11 0.59 6.69 22.51 0.15 0.74 16 4 C -0.22 -0.51 9.04 22.36 0.20 -0.31 16 5 C -0.08 -0.03 10.04 22.25 0.22 0.19 16 6 C -0.16 0.01 8.61 22.28 0.19 0.20 16 7 C -0.03 -0.03 5.29 -19.88 -0.11 -0.14 16 8 C -0.07 0.20 3.86 -11.02 -0.04 0.16 16 9 H 0.10 -0.40 8.09 -2.39 -0.02 -0.42 16 10 C -0.14 0.24 7.26 31.21 0.23 0.46 16 11 C 0.12 -0.16 4.34 45.61 0.20 0.04 16 12 H 0.10 0.18 7.47 -2.39 -0.02 0.16 16 13 N -0.70 0.52 5.21 -442.47 -2.31 -1.78 16 14 C 0.56 2.81 7.70 86.79 0.67 3.48 16 15 O -0.56 -6.36 12.94 -3.90 -0.05 -6.41 16 16 C -0.16 -0.48 5.87 -20.09 -0.12 -0.60 16 17 C -0.07 0.10 8.13 22.53 0.18 0.29 16 18 C -0.13 0.18 5.26 -19.90 -0.10 0.07 16 19 C -0.08 0.23 1.88 71.23 0.13 0.36 16 20 O -0.54 0.15 11.92 -148.98 -1.78 -1.62 16 21 Si 0.75 -3.28 30.23 68.60 2.07 -1.21 16 22 C -0.03 0.00 5.89 -19.81 -0.12 -0.11 16 23 C -0.13 0.35 9.31 71.23 0.66 1.01 16 24 C -0.14 -0.13 9.31 22.23 0.21 0.08 16 25 C -0.02 -0.09 5.91 -19.61 -0.12 -0.21 16 26 C -0.12 -0.54 8.73 71.23 0.62 0.09 16 27 C -0.12 0.58 7.28 31.12 0.23 0.80 16 28 C -0.17 -0.69 9.65 22.37 0.22 -0.48 16 29 H 0.06 -0.24 7.66 -2.39 -0.02 -0.26 16 30 H 0.06 -0.22 7.66 -2.39 -0.02 -0.24 16 31 H 0.11 -0.60 8.14 -2.39 -0.02 -0.62 16 32 H 0.14 -0.18 6.30 -2.91 -0.02 -0.20 16 33 H 0.14 -0.57 8.06 -2.91 -0.02 -0.60 16 34 H 0.14 -0.53 6.65 -2.91 -0.02 -0.55 16 35 H 0.06 0.04 8.14 -2.39 -0.02 0.02 16 36 H 0.10 -0.28 6.31 -2.39 -0.02 -0.30 16 37 H 0.41 -2.14 6.78 -92.71 -0.63 -2.77 16 38 H 0.14 -0.84 3.25 -2.91 -0.01 -0.85 16 39 H 0.13 -0.56 7.38 -2.39 -0.02 -0.57 16 40 H 0.39 -2.09 8.70 -74.06 -0.64 -2.74 16 41 H -0.26 0.91 6.69 99.48 0.67 1.58 16 42 H -0.30 -1.15 7.11 99.48 0.71 -0.44 16 43 H 0.09 -0.43 8.14 -2.39 -0.02 -0.45 16 44 H 0.08 -0.08 6.18 -2.39 -0.01 -0.10 16 45 H 0.07 -0.28 8.08 -2.38 -0.02 -0.30 16 46 H 0.15 -0.33 8.06 -2.91 -0.02 -0.36 16 47 H 0.07 0.38 8.14 -2.39 -0.02 0.36 16 48 H 0.07 0.08 8.04 -2.38 -0.02 0.06 16 49 H 0.08 0.67 5.85 -2.39 -0.01 0.65 16 50 H 0.11 -0.58 7.72 -2.39 -0.02 -0.59 16 51 H 0.09 -0.58 8.14 -2.38 -0.02 -0.60 16 52 H 0.13 0.37 8.05 -2.91 -0.02 0.34 16 Total: 0.00 -17.79 411.45 1.29 -16.51 By element: Atomic # 1 Polarization: -9.47 SS G_CDS: -0.31 Total: -9.78 kcal Atomic # 6 Polarization: 2.57 SS G_CDS: 4.62 Total: 7.20 kcal Atomic # 7 Polarization: 0.52 SS G_CDS: -2.31 Total: -1.78 kcal Atomic # 8 Polarization: -8.14 SS G_CDS: -2.80 Total: -10.93 kcal Atomic # 14 Polarization: -3.28 SS G_CDS: 2.07 Total: -1.21 kcal Total: -17.79 1.29 -16.51 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10812630_9599494.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -3.053 kcal (2) G-P(sol) polarization free energy of solvation -17.795 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -20.848 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.286 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.508 kcal (6) G-S(sol) free energy of system = (1) + (5) -19.561 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.34 seconds