Wall clock time and date at job start Sat Mar 6 2021 14:42:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35905 * 117.00140 * 2 1 4 4 C 1.38710 * 120.05218 * 179.97438 * 3 2 1 5 5 C 1.38168 * 119.93764 * 180.02562 * 4 3 2 6 6 C 1.50703 * 119.96766 * 179.97438 * 5 4 3 7 7 H 1.08992 * 112.84970 * 350.33393 * 6 5 4 8 8 C 1.53787 * 113.61087 * 121.52995 * 6 5 4 9 9 C 1.53786 * 87.07809 * 139.98267 * 8 6 5 10 10 H 1.09008 * 113.60763 * 220.01986 * 9 8 6 11 11 N 1.46491 * 113.61516 * 89.20062 * 9 8 6 12 12 C 1.34779 * 119.99983 * 154.99866 * 11 9 8 13 13 O 1.21286 * 120.00055 * 359.97438 * 12 11 9 14 14 C 1.50700 * 120.00489 * 179.97438 * 12 11 9 15 15 N 1.46494 * 109.47639 * 180.02562 * 14 12 11 16 16 C 1.36830 * 125.06229 * 265.02543 * 15 14 12 17 17 C 1.34237 * 109.94070 * 179.97438 * 16 15 14 18 18 C 1.50696 * 126.50028 * 180.02562 * 17 16 15 19 19 O 1.42907 * 109.46910 * 255.02121 * 18 17 16 20 20 Si 1.86295 * 109.47420 * 15.01956 * 18 17 16 21 21 C 1.46486 * 106.99621 * 359.97438 * 17 16 15 22 22 C 1.39594 * 134.03476 * 179.97438 * 21 17 16 23 23 C 1.36672 * 119.76178 * 179.24417 * 22 21 17 24 24 C 1.38794 * 120.52438 * 0.65912 * 23 22 21 25 25 C 1.37784 * 120.66586 * 359.57651 * 24 23 22 26 26 C 1.37691 * 125.06210 * 84.71787 * 15 14 12 27 27 C 1.53778 * 113.61238 * 219.13204 * 6 5 4 28 28 C 1.38237 * 120.05874 * 0.02562 * 5 4 3 29 29 C 1.38291 * 120.11396 * 359.68307 * 28 5 4 30 30 C 1.38125 * 120.05217 * 0.60010 * 29 28 5 31 31 H 1.08997 * 109.47417 * 179.97438 * 1 2 3 32 32 H 1.09001 * 109.47541 * 300.00453 * 1 2 3 33 33 H 1.09007 * 109.46731 * 60.00115 * 1 2 3 34 34 H 1.07993 * 120.02856 * 0.04156 * 4 3 2 35 35 H 1.08996 * 113.61174 * 254.52827 * 8 6 5 36 36 H 1.08997 * 113.61410 * 25.34882 * 8 6 5 37 37 H 0.97002 * 120.00476 * 334.99130 * 11 9 8 38 38 H 1.09004 * 109.46526 * 300.00392 * 14 12 11 39 39 H 1.09000 * 109.46687 * 59.99533 * 14 12 11 40 40 H 1.08003 * 125.02878 * 0.02562 * 16 15 14 41 41 H 1.09002 * 109.47428 * 135.02008 * 18 17 16 42 42 H 0.96695 * 113.99978 * 60.00287 * 19 18 17 43 43 H 1.48504 * 110.00244 * 180.02562 * 20 18 17 44 44 H 1.48502 * 110.00368 * 301.32307 * 20 18 17 45 45 H 1.07999 * 120.12066 * 359.97438 * 22 21 17 46 46 H 1.07997 * 119.73296 * 180.21011 * 23 22 21 47 47 H 1.07998 * 119.65809 * 179.60090 * 24 23 22 48 48 H 1.08002 * 120.10793 * 179.97438 * 25 24 23 49 49 H 1.08993 * 113.61732 * 334.57124 * 27 6 5 50 50 H 1.09010 * 113.60892 * 105.47285 * 27 6 5 51 51 H 1.08002 * 119.94643 * 179.97438 * 28 5 4 52 52 H 1.08004 * 119.97772 * 180.29464 * 29 28 5 53 53 H 1.08002 * 120.03152 * 179.70250 * 30 29 28 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4312 1.2847 0.0005 5 6 4.0560 2.5171 0.0011 6 6 5.5609 2.5980 0.0022 7 1 6.0366 1.6321 0.1712 8 6 6.1372 3.3670 -1.1984 9 6 7.1514 3.9803 -0.2183 10 1 7.3469 5.0376 -0.3973 11 7 8.3773 3.1917 -0.0726 12 6 9.5216 3.7901 0.3134 13 8 9.5365 4.9816 0.5396 14 6 10.7827 2.9789 0.4639 15 7 11.8779 3.8533 0.8904 16 6 12.7822 4.4464 0.0521 17 6 13.6517 5.1816 0.7629 18 6 14.7990 5.9909 0.2153 19 8 16.0287 5.3117 0.4771 20 14 14.5867 6.2044 -1.6231 21 6 13.2731 5.0489 2.1718 22 6 13.7817 5.5632 3.3658 23 6 13.1751 5.2536 4.5507 24 6 12.0652 4.4206 4.5780 25 6 11.5499 3.8982 3.4118 26 6 12.1471 4.2054 2.1940 27 6 6.1165 3.7225 0.8920 28 6 3.3020 3.6757 0.0016 29 6 1.9209 3.6048 -0.0050 30 6 1.2914 2.3753 0.0004 31 1 -0.3634 -1.0276 -0.0005 32 1 -0.3634 0.5139 0.8899 33 1 -0.3633 0.5139 -0.8901 34 1 4.0206 0.3798 0.0003 35 1 6.5920 2.7235 -1.9514 36 1 5.4454 4.0936 -1.6244 37 1 8.3655 2.2388 -0.2538 38 1 10.6271 2.2009 1.2114 39 1 11.0351 2.5193 -0.4917 40 1 12.7940 4.3397 -1.0226 41 1 14.8151 6.9695 0.6952 42 1 16.0846 4.4321 0.0794 43 1 15.7121 7.0004 -2.1754 44 1 14.5312 4.8765 -2.2857 45 1 14.6443 6.2130 3.3521 46 1 13.5669 5.6544 5.4738 47 1 11.6008 4.1800 5.5228 48 1 10.6861 3.2506 3.4435 49 1 5.4196 4.5474 1.0393 50 1 6.5546 3.3655 1.8241 51 1 3.7923 4.6380 0.0024 52 1 1.3340 4.5114 -0.0094 53 1 0.2128 2.3203 0.0000 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10812630_9818708.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:42:40 Heat of formation + Delta-G solvation = 27.127104 kcal Electronic energy + Delta-G solvation = -35191.219759 eV Core-core repulsion = 30575.663464 eV Total energy + Delta-G solvation = -4615.556295 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 393.177 amu Computer time = 1.55 seconds Orbital eigenvalues (eV) -42.54056 -41.60694 -40.81213 -39.64590 -38.15423 -37.93740 -37.59909 -34.62226 -33.98094 -32.16698 -31.45883 -30.89218 -30.23395 -28.94245 -28.23460 -26.67827 -26.28408 -25.45156 -23.79197 -23.58209 -22.88016 -22.27864 -21.78669 -20.67921 -20.25638 -18.87087 -18.61767 -18.35479 -17.72844 -17.34931 -17.23282 -16.93917 -16.69898 -16.67588 -16.40995 -16.28557 -16.12142 -15.85638 -15.58823 -15.39367 -15.14823 -14.82560 -14.71175 -14.46866 -14.39543 -14.28029 -14.06622 -14.00827 -13.64703 -13.48595 -13.30704 -13.24163 -13.05145 -12.71884 -12.68653 -12.56466 -12.39227 -12.29384 -12.10666 -11.99552 -11.72968 -11.65224 -11.57224 -11.25430 -11.12444 -10.54633 -10.44438 -10.11330 -9.74681 -9.15937 -9.15462 -8.62853 -4.85724 0.14784 0.32369 0.47334 0.64460 1.35814 1.41340 1.47699 1.58858 1.69344 1.97967 2.20412 2.34891 2.73387 2.95622 3.48229 3.54255 3.59688 3.66310 3.71444 3.72119 3.78695 3.85011 3.87640 3.98210 4.04386 4.09805 4.15490 4.18785 4.22480 4.27393 4.30558 4.33977 4.38639 4.50656 4.54481 4.59556 4.63223 4.67463 4.70695 4.72458 4.79497 4.79746 4.86381 4.90535 4.98073 5.03085 5.10346 5.14417 5.16433 5.34035 5.48190 5.51501 5.53950 5.67013 5.70816 5.74181 5.75852 5.82222 6.19683 6.24144 6.43076 6.49759 6.60958 7.16819 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.340 6.340 3 C 0.109 3.891 4 C -0.165 4.165 5 C -0.035 4.035 6 C -0.066 4.066 7 H 0.113 0.887 8 C -0.122 4.122 9 C 0.120 3.880 10 H 0.085 0.915 11 N -0.695 5.695 12 C 0.495 3.505 13 O -0.566 6.566 14 C 0.087 3.913 15 N -0.466 5.466 16 C 0.075 3.925 17 C -0.216 4.216 18 C -0.050 4.050 19 O -0.553 6.553 20 Si 0.765 3.235 21 C -0.115 4.115 22 C -0.088 4.088 23 C -0.154 4.154 24 C -0.108 4.108 25 C -0.134 4.134 26 C 0.092 3.908 27 C -0.142 4.142 28 C -0.161 4.161 29 C -0.085 4.085 30 C -0.223 4.223 31 H 0.115 0.885 32 H 0.062 0.938 33 H 0.063 0.937 34 H 0.134 0.866 35 H 0.092 0.908 36 H 0.099 0.901 37 H 0.420 0.580 38 H 0.142 0.858 39 H 0.162 0.838 40 H 0.197 0.803 41 H 0.103 0.897 42 H 0.384 0.616 43 H -0.302 1.302 44 H -0.259 1.259 45 H 0.118 0.882 46 H 0.136 0.864 47 H 0.144 0.856 48 H 0.132 0.868 49 H 0.094 0.906 50 H 0.068 0.932 51 H 0.138 0.862 52 H 0.141 0.859 53 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.353 -5.172 -3.627 8.959 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.254 6.254 3 C 0.064 3.936 4 C -0.183 4.183 5 C -0.035 4.035 6 C -0.085 4.085 7 H 0.131 0.869 8 C -0.160 4.160 9 C 0.014 3.986 10 H 0.103 0.897 11 N -0.348 5.348 12 C 0.281 3.719 13 O -0.443 6.443 14 C -0.037 4.037 15 N -0.148 5.148 16 C -0.051 4.051 17 C -0.223 4.223 18 C -0.159 4.159 19 O -0.361 6.361 20 Si 0.668 3.332 21 C -0.120 4.120 22 C -0.106 4.106 23 C -0.173 4.173 24 C -0.127 4.127 25 C -0.154 4.154 26 C -0.014 4.014 27 C -0.180 4.180 28 C -0.179 4.179 29 C -0.103 4.103 30 C -0.241 4.241 31 H 0.133 0.867 32 H 0.080 0.920 33 H 0.081 0.919 34 H 0.152 0.848 35 H 0.110 0.890 36 H 0.117 0.883 37 H 0.258 0.742 38 H 0.160 0.840 39 H 0.180 0.820 40 H 0.214 0.786 41 H 0.121 0.879 42 H 0.232 0.768 43 H -0.230 1.230 44 H -0.185 1.185 45 H 0.136 0.864 46 H 0.154 0.846 47 H 0.162 0.838 48 H 0.150 0.850 49 H 0.112 0.888 50 H 0.086 0.914 51 H 0.155 0.845 52 H 0.159 0.841 53 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges -6.060 -4.346 -4.051 8.487 hybrid contribution 0.167 -1.000 0.635 1.197 sum -5.893 -5.346 -3.416 8.659 Atomic orbital electron populations 1.23289 0.76693 1.05376 1.02073 1.86039 1.23239 1.27311 1.88793 1.19311 0.92927 0.84584 0.96786 1.20517 0.91387 0.98911 1.07507 1.19651 0.95761 0.91737 0.96321 1.21631 0.89686 0.99637 0.97507 0.86912 1.23352 0.96855 0.99738 0.96054 1.21813 0.83465 0.96290 0.97027 0.89681 1.45492 1.07620 1.13056 1.68629 1.21375 0.85944 0.88339 0.76263 1.90808 1.85873 1.17303 1.50354 1.21976 0.82786 0.91755 1.07228 1.43429 1.25386 1.42106 1.03873 1.22013 0.90283 0.95941 0.96829 1.20704 1.02380 1.07478 0.91745 1.24582 0.81539 0.96484 1.13298 1.86562 1.36888 1.34962 1.77702 0.94049 0.86800 0.81273 0.71095 1.19338 0.97443 1.01268 0.93919 1.20451 0.99538 0.99345 0.91305 1.20918 0.97539 1.00711 0.98086 1.21124 0.96365 0.97102 0.98073 1.20235 1.01507 1.04036 0.89613 1.18387 0.97363 0.99722 0.85879 1.23568 0.97972 0.98791 0.97683 1.21163 0.93779 0.98816 1.04139 1.21239 0.95074 0.97520 0.96460 1.21485 1.00908 0.92473 1.09269 0.86665 0.91954 0.91857 0.84842 0.88992 0.88282 0.74230 0.84026 0.82012 0.78594 0.87871 0.76754 1.22962 1.18457 0.86350 0.84623 0.83775 0.85004 0.88787 0.91372 0.84451 0.84081 0.84394 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 9.81 113.37 1.11 1.05 16 2 O -0.34 -1.47 10.50 -92.48 -0.97 -2.44 16 3 C 0.11 0.43 6.69 22.51 0.15 0.58 16 4 C -0.16 -0.33 9.65 22.37 0.22 -0.11 16 5 C -0.03 0.04 5.29 -19.88 -0.11 -0.07 16 6 C -0.07 0.40 3.85 -11.01 -0.04 0.36 16 7 H 0.11 -0.99 8.08 -2.39 -0.02 -1.01 16 8 C -0.12 0.92 7.29 31.12 0.23 1.14 16 9 C 0.12 -0.56 4.33 45.58 0.20 -0.36 16 10 H 0.09 0.04 7.46 -2.38 -0.02 0.02 16 11 N -0.69 5.36 5.26 -439.75 -2.31 3.05 16 12 C 0.50 -0.99 7.90 87.66 0.69 -0.29 16 13 O -0.57 -5.33 16.02 -3.05 -0.05 -5.38 16 14 C 0.09 -0.65 6.48 85.63 0.55 -0.10 16 15 N -0.47 -0.68 2.27 -520.01 -1.18 -1.87 16 16 C 0.07 0.09 9.89 83.00 0.82 0.91 16 17 C -0.22 -1.23 5.57 -18.63 -0.10 -1.34 16 18 C -0.05 -0.22 3.06 71.23 0.22 0.00 16 19 O -0.55 -3.74 12.88 -148.98 -1.92 -5.66 16 20 Si 0.77 -0.21 30.82 68.60 2.11 1.90 16 21 C -0.12 -1.14 6.35 -20.20 -0.13 -1.27 16 22 C -0.09 -0.85 10.05 22.23 0.22 -0.62 16 23 C -0.15 -1.04 9.97 22.04 0.22 -0.82 16 24 C -0.11 -0.55 10.01 22.30 0.22 -0.32 16 25 C -0.13 -0.71 9.99 22.36 0.22 -0.49 16 26 C 0.09 0.66 6.80 39.03 0.27 0.92 16 27 C -0.14 0.59 7.27 31.18 0.23 0.82 16 28 C -0.16 0.16 8.53 22.28 0.19 0.35 16 29 C -0.08 0.01 10.04 22.26 0.22 0.24 16 30 C -0.22 -0.34 9.04 22.37 0.20 -0.14 16 31 H 0.12 -0.72 8.14 -2.39 -0.02 -0.74 16 32 H 0.06 -0.27 7.66 -2.39 -0.02 -0.29 16 33 H 0.06 -0.29 7.66 -2.38 -0.02 -0.31 16 34 H 0.13 -0.01 8.05 -2.91 -0.02 -0.04 16 35 H 0.09 -0.90 8.14 -2.39 -0.02 -0.92 16 36 H 0.10 -0.66 7.64 -2.39 -0.02 -0.68 16 37 H 0.42 -6.14 8.70 -92.71 -0.81 -6.95 16 38 H 0.14 -1.72 8.14 -2.38 -0.02 -1.73 16 39 H 0.16 -2.50 8.12 -2.39 -0.02 -2.52 16 40 H 0.20 -1.11 6.27 -2.91 -0.02 -1.13 16 41 H 0.10 0.55 7.96 -2.39 -0.02 0.53 16 42 H 0.38 0.03 8.70 -74.06 -0.64 -0.61 16 43 H -0.30 -2.23 7.11 99.48 0.71 -1.52 16 44 H -0.26 0.11 7.00 99.48 0.70 0.80 16 45 H 0.12 1.03 8.06 -2.91 -0.02 1.01 16 46 H 0.14 0.37 8.06 -2.91 -0.02 0.35 16 47 H 0.14 0.01 8.06 -2.91 -0.02 -0.02 16 48 H 0.13 0.08 8.06 -2.91 -0.02 0.05 16 49 H 0.09 -0.33 6.39 -2.39 -0.02 -0.34 16 50 H 0.07 -0.17 8.14 -2.38 -0.02 -0.19 16 51 H 0.14 -0.57 6.72 -2.91 -0.02 -0.59 16 52 H 0.14 -0.58 8.06 -2.91 -0.02 -0.60 16 53 H 0.14 -0.26 6.30 -2.91 -0.02 -0.27 16 Total: 0.00 -28.67 438.30 1.02 -27.65 By element: Atomic # 1 Polarization: -17.23 SS G_CDS: -0.47 Total: -17.70 kcal Atomic # 6 Polarization: -5.36 SS G_CDS: 5.81 Total: 0.44 kcal Atomic # 7 Polarization: 4.68 SS G_CDS: -3.50 Total: 1.18 kcal Atomic # 8 Polarization: -10.54 SS G_CDS: -2.94 Total: -13.48 kcal Atomic # 14 Polarization: -0.21 SS G_CDS: 2.11 Total: 1.90 kcal Total: -28.67 1.02 -27.65 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10812630_9818708.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 54.781 kcal (2) G-P(sol) polarization free energy of solvation -28.672 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 26.108 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.019 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.654 kcal (6) G-S(sol) free energy of system = (1) + (5) 27.127 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.55 seconds