Wall clock time and date at job start Sat Mar 6 2021 14:42:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35896 * 117.00039 * 2 1 4 4 C 1.38708 * 120.05570 * 0.02562 * 3 2 1 5 5 C 1.38165 * 119.94435 * 179.97438 * 4 3 2 6 6 C 1.38249 * 120.05799 * 359.72515 * 5 4 3 7 7 C 1.38285 * 120.10731 * 0.54859 * 6 5 4 8 8 C 1.50701 * 119.97259 * 179.72495 * 7 6 5 9 9 H 1.09001 * 112.85049 * 190.92163 * 8 7 6 10 10 C 1.53779 * 113.61419 * 322.22939 * 8 7 6 11 11 C 1.53784 * 87.08045 * 139.98099 * 10 8 7 12 12 H 1.09004 * 113.61451 * 220.02152 * 11 10 8 13 13 N 1.46496 * 113.61524 * 89.11591 * 11 10 8 14 14 C 1.34776 * 120.00015 * 107.50411 * 13 11 10 15 15 O 1.21630 * 119.99755 * 359.97438 * 14 13 11 16 16 C 1.47264 * 120.00416 * 180.02562 * 14 13 11 17 17 C 1.36763 * 126.94733 * 179.97438 * 16 14 13 18 18 C 1.50705 * 125.79883 * 359.97438 * 17 16 14 19 19 N 1.34660 * 108.40127 * 179.97438 * 17 16 14 20 20 C 1.36446 * 110.29178 * 0.02562 * 19 17 16 21 21 C 1.50701 * 125.56600 * 179.97438 * 20 19 17 22 22 O 1.42903 * 109.47302 * 245.01945 * 21 20 19 23 23 Si 1.86296 * 109.47530 * 5.02161 * 21 20 19 24 24 C 1.34479 * 108.86173 * 359.74195 * 20 19 17 25 25 C 1.53779 * 113.61123 * 59.72845 * 8 7 6 26 26 C 1.38124 * 120.05659 * 359.45381 * 7 6 5 27 27 H 1.08998 * 109.46690 * 179.97438 * 1 2 3 28 28 H 1.08998 * 109.47110 * 300.00215 * 1 2 3 29 29 H 1.08999 * 109.46648 * 59.99940 * 1 2 3 30 30 H 1.08002 * 120.02729 * 359.95275 * 4 3 2 31 31 H 1.08008 * 119.97537 * 179.97438 * 5 4 3 32 32 H 1.07996 * 119.94955 * 180.29225 * 6 5 4 33 33 H 1.09002 * 113.61557 * 25.43210 * 10 8 7 34 34 H 1.09004 * 113.61501 * 254.52631 * 10 8 7 35 35 H 0.96998 * 120.00377 * 287.50245 * 13 11 10 36 36 H 1.09001 * 109.47210 * 89.99569 * 18 17 16 37 37 H 1.09002 * 109.47105 * 209.99784 * 18 17 16 38 38 H 1.08995 * 109.47196 * 329.99272 * 18 17 16 39 39 H 0.96999 * 124.84946 * 180.02562 * 19 17 16 40 40 H 1.09004 * 109.47123 * 125.02277 * 21 20 19 41 41 H 0.96693 * 114.00308 * 180.02562 * 22 21 20 42 42 H 1.48496 * 110.00273 * 178.68240 * 23 21 20 43 43 H 1.48508 * 109.99794 * 300.00349 * 23 21 20 44 44 H 1.08002 * 126.83839 * 180.25269 * 24 20 19 45 45 H 1.08997 * 113.61646 * 105.47284 * 25 8 7 46 46 H 1.08998 * 113.69354 * 334.57592 * 25 8 7 47 47 H 1.08003 * 120.03173 * 180.25158 * 26 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2108 0.0000 4 6 1.2917 2.3749 0.0005 5 6 1.9213 3.6047 0.0011 6 6 3.3020 3.6758 0.0068 7 6 4.0562 2.5168 0.0006 8 6 5.5611 2.5978 0.0006 9 1 6.0367 1.6367 -0.1949 10 6 6.1161 3.7476 -0.8566 11 6 7.1517 3.9735 0.2575 12 1 7.3474 5.0256 0.4649 13 7 8.3768 3.1883 0.0881 14 6 9.5211 3.7962 -0.2824 15 8 9.5366 4.9969 -0.4765 16 6 10.7525 3.0068 -0.4533 17 6 11.9837 3.4738 -0.8229 18 6 12.3258 4.9085 -1.1325 19 7 12.8382 2.4339 -0.8631 20 6 12.1944 1.2790 -0.5260 21 6 12.8239 -0.0886 -0.4610 22 8 12.2412 -0.9292 -1.4589 23 14 14.6564 0.0561 -0.7638 24 6 10.9075 1.5615 -0.2563 25 6 6.1382 3.3339 1.2212 26 6 3.4316 1.2848 0.0000 27 1 -0.3632 -1.0277 -0.0005 28 1 -0.3633 0.5139 0.8899 29 1 -0.3632 0.5139 -0.8900 30 1 0.2130 2.3199 0.0002 31 1 1.3344 4.5114 0.0011 32 1 3.7923 4.6380 0.0120 33 1 5.4190 4.5765 -0.9794 34 1 6.5535 3.4178 -1.7990 35 1 8.3644 2.2307 0.2425 36 1 12.6453 5.4110 -0.2195 37 1 13.1319 4.9397 -1.8656 38 1 11.4478 5.4123 -1.5364 39 1 13.7772 2.4968 -1.0980 40 1 12.6516 -0.5215 0.5245 41 1 12.5993 -1.8273 -1.4748 42 1 15.2939 -1.2819 -0.6708 43 1 14.9047 0.6450 -2.1043 44 1 10.1404 0.8630 0.0436 45 1 6.5936 2.6702 1.9562 46 1 5.4482 4.0499 1.6676 47 1 4.0211 0.3799 -0.0008 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10812630_9865296.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:42:46 Heat of formation + Delta-G solvation = -5.332374 kcal Electronic energy + Delta-G solvation = -28828.359671 eV Core-core repulsion = 24751.611868 eV Total energy + Delta-G solvation = -4076.747803 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 343.162 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -42.42650 -41.47469 -40.55654 -39.21542 -37.95986 -37.69763 -34.31647 -32.85355 -32.31157 -31.76103 -30.77333 -29.01488 -28.26114 -26.64970 -26.35468 -25.24784 -23.60754 -23.34429 -22.13362 -21.41435 -20.60766 -20.06356 -18.78831 -18.66228 -18.11838 -17.18447 -17.08547 -16.90901 -16.72207 -16.62800 -16.21445 -15.89622 -15.75468 -15.48021 -15.12211 -14.90573 -14.53083 -14.50838 -14.36714 -14.15229 -14.08753 -13.90560 -13.64690 -13.44707 -13.44108 -13.23059 -13.11382 -12.93884 -12.64186 -12.52345 -12.25625 -12.16055 -12.05796 -11.59764 -11.51798 -11.17717 -10.81108 -10.52409 -9.94817 -9.74336 -9.65610 -9.09037 -9.05893 -5.25080 0.40809 0.57431 0.83551 0.98340 1.26581 1.31717 1.67989 2.00314 2.36218 2.45381 2.70728 2.82438 3.26927 3.52954 3.64917 3.76221 3.80671 3.89164 3.90702 4.00401 4.10598 4.14157 4.19853 4.22832 4.23957 4.24210 4.29795 4.41977 4.55301 4.55705 4.62244 4.69156 4.74844 4.75015 4.79554 4.80855 4.92176 5.01352 5.06580 5.09767 5.17140 5.20958 5.34057 5.41549 5.56142 5.69498 5.76022 5.81898 5.86961 5.93237 6.25341 6.39906 6.50155 6.77182 7.54349 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.319 6.319 3 C 0.129 3.871 4 C -0.214 4.214 5 C -0.077 4.077 6 C -0.154 4.154 7 C -0.031 4.031 8 C -0.075 4.075 9 H 0.098 0.902 10 C -0.144 4.144 11 C 0.123 3.877 12 H 0.106 0.894 13 N -0.710 5.710 14 C 0.597 3.403 15 O -0.547 6.547 16 C -0.241 4.241 17 C 0.126 3.874 18 C -0.099 4.099 19 N -0.545 5.545 20 C 0.018 3.982 21 C -0.042 4.042 22 O -0.531 6.531 23 Si 0.666 3.334 24 C -0.127 4.127 25 C -0.135 4.135 26 C -0.149 4.149 27 H 0.101 0.899 28 H 0.056 0.944 29 H 0.056 0.944 30 H 0.127 0.873 31 H 0.125 0.875 32 H 0.126 0.874 33 H 0.095 0.905 34 H 0.075 0.925 35 H 0.401 0.599 36 H 0.083 0.917 37 H 0.066 0.934 38 H 0.104 0.896 39 H 0.414 0.586 40 H 0.089 0.911 41 H 0.383 0.617 42 H -0.249 1.249 43 H -0.251 1.251 44 H 0.146 0.854 45 H 0.077 0.923 46 H 0.098 0.902 47 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.624 -1.882 2.686 3.660 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.232 6.232 3 C 0.083 3.917 4 C -0.232 4.232 5 C -0.095 4.095 6 C -0.172 4.172 7 C -0.031 4.031 8 C -0.093 4.093 9 H 0.117 0.883 10 C -0.182 4.182 11 C 0.017 3.983 12 H 0.124 0.876 13 N -0.361 5.361 14 C 0.387 3.613 15 O -0.426 6.426 16 C -0.251 4.251 17 C 0.007 3.993 18 C -0.156 4.156 19 N -0.144 5.144 20 C -0.090 4.090 21 C -0.153 4.153 22 O -0.339 6.339 23 Si 0.566 3.434 24 C -0.151 4.151 25 C -0.173 4.173 26 C -0.168 4.168 27 H 0.119 0.881 28 H 0.074 0.926 29 H 0.074 0.926 30 H 0.144 0.856 31 H 0.143 0.857 32 H 0.144 0.856 33 H 0.114 0.886 34 H 0.093 0.907 35 H 0.235 0.765 36 H 0.101 0.899 37 H 0.085 0.915 38 H 0.123 0.877 39 H 0.253 0.747 40 H 0.107 0.893 41 H 0.231 0.769 42 H -0.173 1.173 43 H -0.175 1.175 44 H 0.164 0.836 45 H 0.096 0.904 46 H 0.117 0.883 47 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 2.192 -0.961 1.895 3.053 hybrid contribution -0.495 -1.711 -0.485 1.846 sum 1.697 -2.672 1.410 3.465 Atomic orbital electron populations 1.23078 0.78153 1.04139 1.01421 1.86076 1.21568 1.26950 1.88620 1.19036 0.92327 0.84228 0.96066 1.21257 1.00108 0.92478 1.09393 1.20944 0.94597 0.97025 0.96926 1.20930 0.93608 0.98199 1.04486 1.19476 0.94815 0.92123 0.96668 1.21617 0.90699 0.99288 0.97684 0.88343 1.23576 0.98087 0.98252 0.98309 1.21791 0.83316 0.97086 0.96064 0.87597 1.45424 1.08401 1.11495 1.70758 1.17288 0.82148 0.86436 0.75420 1.90749 1.85703 1.14549 1.51580 1.20054 0.93430 0.93633 1.17967 1.20382 0.88784 0.90421 0.99669 1.20658 1.04027 0.88406 1.02547 1.41659 1.11601 1.06309 1.54808 1.19085 0.93509 0.86359 1.10020 1.23999 1.08356 0.88398 0.94567 1.86619 1.64211 1.26313 1.56733 0.95592 0.74827 0.87064 0.85892 1.21752 0.94919 0.93556 1.04875 1.23420 0.97702 0.99957 0.96199 1.20312 0.91286 0.98245 1.06944 0.88091 0.92561 0.92577 0.85553 0.85689 0.85650 0.88619 0.90661 0.76475 0.89876 0.91536 0.87745 0.74736 0.89337 0.76871 1.17325 1.17540 0.83649 0.90447 0.88314 0.85324 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 9.81 101.05 0.99 0.97 16 2 O -0.32 -0.92 10.50 -19.41 -0.20 -1.12 16 3 C 0.13 0.37 6.69 -39.22 -0.26 0.11 16 4 C -0.21 -0.35 9.04 -39.43 -0.36 -0.71 16 5 C -0.08 -0.08 10.04 -39.60 -0.40 -0.48 16 6 C -0.15 -0.14 8.60 -39.56 -0.34 -0.48 16 7 C -0.03 -0.04 5.29 -104.65 -0.55 -0.59 16 8 C -0.07 0.02 3.86 -90.96 -0.35 -0.33 16 9 H 0.10 -0.09 8.09 -51.93 -0.42 -0.51 16 10 C -0.14 -0.03 7.25 -25.92 -0.19 -0.22 16 11 C 0.12 0.07 4.32 -67.12 -0.29 -0.22 16 12 H 0.11 0.21 7.47 -51.93 -0.39 -0.18 16 13 N -0.71 -0.71 5.26 -54.14 -0.28 -0.99 16 14 C 0.60 2.20 7.81 -12.59 -0.10 2.10 16 15 O -0.55 -3.53 14.41 5.25 0.08 -3.45 16 16 C -0.24 -0.65 6.29 -103.35 -0.65 -1.30 16 17 C 0.13 0.21 7.17 -81.88 -0.59 -0.38 16 18 C -0.10 -0.03 9.88 36.01 0.36 0.32 16 19 N -0.54 0.00 5.41 -5.42 -0.03 -0.03 16 20 C 0.02 0.01 6.13 -81.87 -0.50 -0.49 16 21 C -0.04 0.06 2.97 36.01 0.11 0.16 16 22 O -0.53 -0.04 12.86 -35.23 -0.45 -0.50 16 23 Si 0.67 -1.60 30.96 -169.99 -5.26 -6.86 16 24 C -0.13 -0.17 10.45 -37.50 -0.39 -0.56 16 25 C -0.13 0.12 7.29 -25.92 -0.19 -0.07 16 26 C -0.15 -0.35 9.65 -39.43 -0.38 -0.73 16 27 H 0.10 -0.23 8.14 -51.93 -0.42 -0.65 16 28 H 0.06 -0.08 7.66 -51.93 -0.40 -0.48 16 29 H 0.06 -0.08 7.66 -51.93 -0.40 -0.48 16 30 H 0.13 -0.01 6.30 -52.49 -0.33 -0.34 16 31 H 0.13 -0.11 8.06 -52.48 -0.42 -0.54 16 32 H 0.13 -0.08 6.67 -52.49 -0.35 -0.43 16 33 H 0.10 -0.02 6.32 -51.93 -0.33 -0.35 16 34 H 0.07 0.10 8.14 -51.93 -0.42 -0.32 16 35 H 0.40 -0.37 7.82 -40.82 -0.32 -0.69 16 36 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 37 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 38 H 0.10 0.24 6.47 -51.93 -0.34 -0.09 16 39 H 0.41 -1.02 6.72 -40.82 -0.27 -1.29 16 40 H 0.09 -0.28 7.96 -51.93 -0.41 -0.69 16 41 H 0.38 -1.53 8.74 45.56 0.40 -1.13 16 42 H -0.25 0.08 7.11 56.52 0.40 0.48 16 43 H -0.25 -0.14 7.11 56.52 0.40 0.27 16 44 H 0.15 -0.06 7.70 -52.49 -0.40 -0.46 16 45 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 46 H 0.10 -0.11 7.72 -51.93 -0.40 -0.51 16 47 H 0.13 0.19 8.05 -52.48 -0.42 -0.23 16 LS Contribution 386.26 15.07 5.82 5.82 Total: 0.00 -9.25 386.26 -10.94 -20.19 By element: Atomic # 1 Polarization: -3.65 SS G_CDS: -6.52 Total: -10.17 kcal Atomic # 6 Polarization: 1.19 SS G_CDS: -4.08 Total: -2.90 kcal Atomic # 7 Polarization: -0.70 SS G_CDS: -0.31 Total: -1.02 kcal Atomic # 8 Polarization: -4.48 SS G_CDS: -0.58 Total: -5.07 kcal Atomic # 14 Polarization: -1.60 SS G_CDS: -5.26 Total: -6.86 kcal Total LS contribution 5.82 Total: 5.82 kcal Total: -9.25 -10.94 -20.19 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10812630_9865296.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 14.855 kcal (2) G-P(sol) polarization free energy of solvation -9.250 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 5.605 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.938 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.187 kcal (6) G-S(sol) free energy of system = (1) + (5) -5.332 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds