Wall clock time and date at job start Sat Mar 6 2021 14:42:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35896 * 117.00039 * 2 1 4 4 C 1.38708 * 120.05570 * 0.02562 * 3 2 1 5 5 C 1.38165 * 119.94435 * 179.97438 * 4 3 2 6 6 C 1.38249 * 120.05799 * 359.72515 * 5 4 3 7 7 C 1.38285 * 120.10731 * 0.54859 * 6 5 4 8 8 C 1.50701 * 119.97259 * 179.72495 * 7 6 5 9 9 H 1.09001 * 112.85049 * 190.92163 * 8 7 6 10 10 C 1.53779 * 113.61419 * 322.22939 * 8 7 6 11 11 C 1.53784 * 87.08045 * 139.98099 * 10 8 7 12 12 H 1.09004 * 113.61451 * 220.02152 * 11 10 8 13 13 N 1.46496 * 113.61524 * 89.11591 * 11 10 8 14 14 C 1.34776 * 120.00015 * 107.50411 * 13 11 10 15 15 O 1.21630 * 119.99755 * 359.97438 * 14 13 11 16 16 C 1.47264 * 120.00416 * 180.02562 * 14 13 11 17 17 C 1.36763 * 126.94733 * 179.97438 * 16 14 13 18 18 C 1.50705 * 125.79883 * 359.97438 * 17 16 14 19 19 N 1.34660 * 108.40127 * 179.97438 * 17 16 14 20 20 C 1.36446 * 110.29178 * 0.02562 * 19 17 16 21 21 C 1.50701 * 125.56600 * 179.97438 * 20 19 17 22 22 O 1.42903 * 109.47302 * 245.01945 * 21 20 19 23 23 Si 1.86296 * 109.47530 * 5.02161 * 21 20 19 24 24 C 1.34479 * 108.86173 * 359.74195 * 20 19 17 25 25 C 1.53779 * 113.61123 * 59.72845 * 8 7 6 26 26 C 1.38124 * 120.05659 * 359.45381 * 7 6 5 27 27 H 1.08998 * 109.46690 * 179.97438 * 1 2 3 28 28 H 1.08998 * 109.47110 * 300.00215 * 1 2 3 29 29 H 1.08999 * 109.46648 * 59.99940 * 1 2 3 30 30 H 1.08002 * 120.02729 * 359.95275 * 4 3 2 31 31 H 1.08008 * 119.97537 * 179.97438 * 5 4 3 32 32 H 1.07996 * 119.94955 * 180.29225 * 6 5 4 33 33 H 1.09002 * 113.61557 * 25.43210 * 10 8 7 34 34 H 1.09004 * 113.61501 * 254.52631 * 10 8 7 35 35 H 0.96998 * 120.00377 * 287.50245 * 13 11 10 36 36 H 1.09001 * 109.47210 * 89.99569 * 18 17 16 37 37 H 1.09002 * 109.47105 * 209.99784 * 18 17 16 38 38 H 1.08995 * 109.47196 * 329.99272 * 18 17 16 39 39 H 0.96999 * 124.84946 * 180.02562 * 19 17 16 40 40 H 1.09004 * 109.47123 * 125.02277 * 21 20 19 41 41 H 0.96693 * 114.00308 * 180.02562 * 22 21 20 42 42 H 1.48496 * 110.00273 * 178.68240 * 23 21 20 43 43 H 1.48508 * 109.99794 * 300.00349 * 23 21 20 44 44 H 1.08002 * 126.83839 * 180.25269 * 24 20 19 45 45 H 1.08997 * 113.61646 * 105.47284 * 25 8 7 46 46 H 1.08998 * 113.69354 * 334.57592 * 25 8 7 47 47 H 1.08003 * 120.03173 * 180.25158 * 26 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2108 0.0000 4 6 1.2917 2.3749 0.0005 5 6 1.9213 3.6047 0.0011 6 6 3.3020 3.6758 0.0068 7 6 4.0562 2.5168 0.0006 8 6 5.5611 2.5978 0.0006 9 1 6.0367 1.6367 -0.1949 10 6 6.1161 3.7476 -0.8566 11 6 7.1517 3.9735 0.2575 12 1 7.3474 5.0256 0.4649 13 7 8.3768 3.1883 0.0881 14 6 9.5211 3.7962 -0.2824 15 8 9.5366 4.9969 -0.4765 16 6 10.7525 3.0068 -0.4533 17 6 11.9837 3.4738 -0.8229 18 6 12.3258 4.9085 -1.1325 19 7 12.8382 2.4339 -0.8631 20 6 12.1944 1.2790 -0.5260 21 6 12.8239 -0.0886 -0.4610 22 8 12.2412 -0.9292 -1.4589 23 14 14.6564 0.0561 -0.7638 24 6 10.9075 1.5615 -0.2563 25 6 6.1382 3.3339 1.2212 26 6 3.4316 1.2848 0.0000 27 1 -0.3632 -1.0277 -0.0005 28 1 -0.3633 0.5139 0.8899 29 1 -0.3632 0.5139 -0.8900 30 1 0.2130 2.3199 0.0002 31 1 1.3344 4.5114 0.0011 32 1 3.7923 4.6380 0.0120 33 1 5.4190 4.5765 -0.9794 34 1 6.5535 3.4178 -1.7990 35 1 8.3644 2.2307 0.2425 36 1 12.6453 5.4110 -0.2195 37 1 13.1319 4.9397 -1.8656 38 1 11.4478 5.4123 -1.5364 39 1 13.7772 2.4968 -1.0980 40 1 12.6516 -0.5215 0.5245 41 1 12.5993 -1.8273 -1.4748 42 1 15.2939 -1.2819 -0.6708 43 1 14.9047 0.6450 -2.1043 44 1 10.1404 0.8630 0.0436 45 1 6.5936 2.6702 1.9562 46 1 5.4482 4.0499 1.6676 47 1 4.0211 0.3799 -0.0008 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10812630_9865296.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:42:44 Heat of formation + Delta-G solvation = -4.327563 kcal Electronic energy + Delta-G solvation = -28828.316099 eV Core-core repulsion = 24751.611868 eV Total energy + Delta-G solvation = -4076.704231 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 343.162 amu Computer time = 1.34 seconds Orbital eigenvalues (eV) -42.47887 -41.53667 -40.65863 -39.37995 -37.91481 -37.76253 -34.47738 -32.88976 -32.38158 -31.82231 -30.83447 -28.99200 -28.23767 -26.66149 -26.41389 -25.27549 -23.67330 -23.42246 -22.20801 -21.44145 -20.74885 -20.11688 -18.78312 -18.65034 -18.15267 -17.23660 -17.16924 -16.96636 -16.81728 -16.67079 -16.26429 -15.94326 -15.79411 -15.52288 -15.15358 -14.97608 -14.61716 -14.53301 -14.42370 -14.22421 -14.05766 -13.96106 -13.69185 -13.44733 -13.44206 -13.22257 -13.15478 -12.90952 -12.66444 -12.53598 -12.27108 -12.13212 -12.08927 -11.63267 -11.55426 -11.22332 -10.94868 -10.53644 -10.11314 -9.80840 -9.73564 -9.16130 -9.13955 -5.06372 0.33178 0.48182 0.69808 1.11124 1.25680 1.45981 1.79996 2.01029 2.34913 2.38295 2.52111 2.74534 3.40933 3.50258 3.70831 3.73635 3.76599 3.88341 3.89122 3.98605 4.09565 4.10756 4.19675 4.22101 4.28228 4.34685 4.39550 4.44309 4.51886 4.55146 4.64697 4.69983 4.70878 4.73958 4.77127 4.80735 4.89753 4.99539 5.04170 5.04877 5.11544 5.17938 5.29277 5.34513 5.50105 5.61371 5.69543 5.74546 5.83101 5.87111 6.39112 6.43947 6.57537 6.66181 7.35569 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.340 6.340 3 C 0.110 3.890 4 C -0.222 4.222 5 C -0.083 4.083 6 C -0.160 4.160 7 C -0.033 4.033 8 C -0.068 4.068 9 H 0.104 0.896 10 C -0.141 4.141 11 C 0.119 3.881 12 H 0.091 0.909 13 N -0.700 5.700 14 C 0.591 3.409 15 O -0.583 6.583 16 C -0.265 4.265 17 C 0.119 3.881 18 C -0.096 4.096 19 N -0.537 5.537 20 C 0.013 3.987 21 C -0.052 4.052 22 O -0.555 6.555 23 Si 0.751 3.249 24 C -0.137 4.137 25 C -0.122 4.122 26 C -0.167 4.167 27 H 0.115 0.885 28 H 0.064 0.936 29 H 0.062 0.938 30 H 0.140 0.860 31 H 0.144 0.856 32 H 0.140 0.860 33 H 0.101 0.899 34 H 0.062 0.938 35 H 0.410 0.590 36 H 0.090 0.910 37 H 0.087 0.913 38 H 0.081 0.919 39 H 0.425 0.575 40 H 0.112 0.888 41 H 0.399 0.601 42 H -0.275 1.275 43 H -0.292 1.292 44 H 0.159 0.841 45 H 0.085 0.915 46 H 0.105 0.895 47 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.810 -2.369 3.323 4.464 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.254 6.254 3 C 0.065 3.935 4 C -0.240 4.240 5 C -0.101 4.101 6 C -0.178 4.178 7 C -0.034 4.034 8 C -0.086 4.086 9 H 0.122 0.878 10 C -0.179 4.179 11 C 0.014 3.986 12 H 0.109 0.891 13 N -0.350 5.350 14 C 0.382 3.618 15 O -0.465 6.465 16 C -0.275 4.275 17 C -0.001 4.001 18 C -0.153 4.153 19 N -0.137 5.137 20 C -0.095 4.095 21 C -0.161 4.161 22 O -0.365 6.365 23 Si 0.654 3.346 24 C -0.161 4.161 25 C -0.160 4.160 26 C -0.186 4.186 27 H 0.133 0.867 28 H 0.082 0.918 29 H 0.081 0.919 30 H 0.158 0.842 31 H 0.162 0.838 32 H 0.158 0.842 33 H 0.120 0.880 34 H 0.081 0.919 35 H 0.247 0.753 36 H 0.109 0.891 37 H 0.106 0.894 38 H 0.100 0.900 39 H 0.266 0.734 40 H 0.130 0.870 41 H 0.250 0.750 42 H -0.201 1.201 43 H -0.219 1.219 44 H 0.176 0.824 45 H 0.104 0.896 46 H 0.123 0.877 47 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 2.361 -1.491 2.556 3.785 hybrid contribution -0.570 -1.596 -0.724 1.843 sum 1.791 -3.087 1.832 4.012 Atomic orbital electron populations 1.23294 0.76644 1.05371 1.02124 1.86038 1.23295 1.27305 1.88799 1.19278 0.92762 0.84687 0.96804 1.21486 1.00929 0.92376 1.09237 1.21251 0.94935 0.97584 0.96321 1.21176 0.93838 0.98727 1.04049 1.19620 0.95449 0.91937 0.96348 1.21586 0.89949 0.99353 0.97731 0.87798 1.23559 0.98007 0.98723 0.97639 1.21809 0.83349 0.96468 0.97013 0.89119 1.45357 1.07951 1.11996 1.69721 1.17553 0.83032 0.86146 0.75096 1.90722 1.86340 1.16011 1.53471 1.20173 0.93528 0.94479 1.19325 1.20587 0.88930 0.91187 0.99394 1.20624 1.03688 0.87635 1.03365 1.41668 1.12053 1.05846 1.54144 1.19461 0.93557 0.87251 1.09242 1.24271 1.08914 0.87402 0.95551 1.86566 1.65049 1.27669 1.57253 0.94614 0.72558 0.84381 0.83040 1.21966 0.95782 0.93091 1.05279 1.23359 0.96925 0.99815 0.95879 1.20500 0.91536 0.98820 1.07725 0.86685 0.91771 0.91911 0.84184 0.83784 0.84223 0.88042 0.91895 0.75309 0.89142 0.89442 0.89980 0.73435 0.87021 0.74991 1.20085 1.21926 0.82390 0.89611 0.87686 0.85237 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.03 9.81 113.37 1.11 1.09 16 2 O -0.34 -2.20 10.50 -92.38 -0.97 -3.17 16 3 C 0.11 0.70 6.69 22.51 0.15 0.85 16 4 C -0.22 -0.74 9.04 22.36 0.20 -0.53 16 5 C -0.08 -0.13 10.04 22.25 0.22 0.09 16 6 C -0.16 -0.25 8.60 22.28 0.19 -0.05 16 7 C -0.03 -0.09 5.29 -19.88 -0.11 -0.19 16 8 C -0.07 0.04 3.86 -11.01 -0.04 -0.01 16 9 H 0.10 -0.17 8.09 -2.39 -0.02 -0.19 16 10 C -0.14 -0.15 7.25 31.12 0.23 0.07 16 11 C 0.12 0.22 4.32 45.52 0.20 0.42 16 12 H 0.09 0.48 7.47 -2.39 -0.02 0.47 16 13 N -0.70 -2.04 5.26 -443.44 -2.33 -4.37 16 14 C 0.59 5.25 7.81 86.62 0.68 5.93 16 15 O -0.58 -8.80 14.41 -4.13 -0.06 -8.86 16 16 C -0.27 -1.69 6.29 -19.04 -0.12 -1.81 16 17 C 0.12 0.46 7.17 41.78 0.30 0.76 16 18 C -0.10 -0.14 9.88 71.24 0.70 0.57 16 19 N -0.54 0.08 5.41 -171.07 -0.93 -0.85 16 20 C 0.01 0.01 6.13 40.98 0.25 0.26 16 21 C -0.05 0.19 2.97 71.24 0.21 0.40 16 22 O -0.55 0.28 12.86 -148.98 -1.92 -1.64 16 23 Si 0.75 -4.16 30.96 68.60 2.12 -2.03 16 24 C -0.14 -0.39 10.45 23.62 0.25 -0.14 16 25 C -0.12 0.24 7.29 31.12 0.23 0.47 16 26 C -0.17 -0.91 9.65 22.37 0.22 -0.69 16 27 H 0.11 -0.54 8.14 -2.39 -0.02 -0.56 16 28 H 0.06 -0.20 7.66 -2.39 -0.02 -0.22 16 29 H 0.06 -0.18 7.66 -2.39 -0.02 -0.20 16 30 H 0.14 -0.07 6.30 -2.91 -0.02 -0.09 16 31 H 0.14 -0.42 8.06 -2.91 -0.02 -0.44 16 32 H 0.14 -0.27 6.67 -2.91 -0.02 -0.29 16 33 H 0.10 -0.02 6.32 -2.39 -0.02 -0.03 16 34 H 0.06 0.24 8.14 -2.39 -0.02 0.22 16 35 H 0.41 -0.59 7.82 -92.71 -0.73 -1.32 16 36 H 0.09 -0.03 8.14 -2.39 -0.02 -0.05 16 37 H 0.09 -0.29 8.14 -2.39 -0.02 -0.31 16 38 H 0.08 0.54 6.47 -2.39 -0.02 0.53 16 39 H 0.42 -2.27 6.72 -92.71 -0.62 -2.89 16 40 H 0.11 -0.91 7.96 -2.39 -0.02 -0.93 16 41 H 0.40 -3.49 8.74 -74.06 -0.65 -4.14 16 42 H -0.28 0.34 7.11 99.48 0.71 1.04 16 43 H -0.29 -0.38 7.11 99.48 0.71 0.33 16 44 H 0.16 -0.15 7.70 -2.91 -0.02 -0.17 16 45 H 0.09 -0.28 8.14 -2.39 -0.02 -0.30 16 46 H 0.10 -0.30 7.72 -2.39 -0.02 -0.32 16 47 H 0.13 0.53 8.05 -2.91 -0.02 0.50 16 Total: 0.00 -22.67 386.26 -0.14 -22.81 By element: Atomic # 1 Polarization: -8.44 SS G_CDS: -0.93 Total: -9.37 kcal Atomic # 6 Polarization: 2.61 SS G_CDS: 4.87 Total: 7.48 kcal Atomic # 7 Polarization: -1.96 SS G_CDS: -3.26 Total: -5.22 kcal Atomic # 8 Polarization: -10.72 SS G_CDS: -2.94 Total: -13.66 kcal Atomic # 14 Polarization: -4.16 SS G_CDS: 2.12 Total: -2.03 kcal Total: -22.67 -0.14 -22.81 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10812630_9865296.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 18.481 kcal (2) G-P(sol) polarization free energy of solvation -22.670 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -4.189 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.138 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.808 kcal (6) G-S(sol) free energy of system = (1) + (5) -4.328 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.34 seconds