Wall clock time and date at job start Sat Mar 6 2021 16:37:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86295 * 1 3 3 C 1.86300 * 109.47178 * 2 1 4 4 C 1.86298 * 109.46970 * 239.99606 * 2 1 3 5 5 C 1.86799 * 109.46962 * 119.99548 * 2 1 3 6 6 C 1.38238 * 119.99768 * 90.00159 * 5 2 1 7 7 C 1.38235 * 120.00108 * 180.02562 * 6 5 2 8 8 C 1.38243 * 119.99617 * 0.02562 * 7 6 5 9 9 C 1.50706 * 119.99586 * 179.97438 * 8 7 6 10 10 N 1.46505 * 109.47014 * 89.99954 * 9 8 7 11 11 C 1.34770 * 119.99664 * 179.97438 * 10 9 8 12 12 O 1.21550 * 120.00750 * 0.02562 * 11 10 9 13 13 C 1.47846 * 119.99916 * 179.97438 * 11 10 9 14 14 C 1.39984 * 120.56351 * 180.02562 * 13 11 10 15 15 C 1.38393 * 118.29093 * 179.97438 * 14 13 11 16 16 C 1.50693 * 120.34922 * 180.02562 * 15 14 13 17 17 O 1.42901 * 109.47113 * 65.00547 * 16 15 14 18 18 Si 1.86300 * 109.47189 * 185.00055 * 16 15 14 19 19 H 1.48497 * 109.47257 * 300.00169 * 18 16 15 20 20 H 1.48499 * 109.46878 * 60.00568 * 18 16 15 21 21 H 1.48507 * 109.46999 * 180.02562 * 18 16 15 22 22 C 1.38309 * 119.30367 * 0.02562 * 15 14 13 23 23 N 1.31957 * 121.08045 * 359.97438 * 22 15 14 24 24 C 1.31663 * 121.88360 * 359.72708 * 23 22 15 25 25 C 1.38233 * 120.00248 * 0.25361 * 8 7 6 26 26 C 1.38234 * 120.00169 * 270.02385 * 5 2 1 27 27 H 1.09006 * 109.47606 * 300.00755 * 1 2 3 28 28 H 1.09001 * 109.47017 * 60.00247 * 1 2 3 29 29 H 1.09004 * 109.47654 * 180.02562 * 1 2 3 30 30 H 1.09004 * 109.47074 * 180.02562 * 3 2 1 31 31 H 1.09001 * 109.46492 * 299.99514 * 3 2 1 32 32 H 1.08993 * 109.47520 * 59.99489 * 3 2 1 33 33 H 1.09003 * 109.47232 * 299.99789 * 4 2 1 34 34 H 1.08991 * 109.47125 * 60.00223 * 4 2 1 35 35 H 1.09007 * 109.46666 * 180.02562 * 4 2 1 36 36 H 1.08000 * 120.00578 * 359.97438 * 6 5 2 37 37 H 1.07999 * 120.00165 * 179.97438 * 7 6 5 38 38 H 1.09000 * 109.46646 * 209.99280 * 9 8 7 39 39 H 1.09000 * 109.47248 * 329.99998 * 9 8 7 40 40 H 0.97000 * 120.00105 * 359.97438 * 10 9 8 41 41 H 1.08007 * 120.85087 * 359.95590 * 14 13 11 42 42 H 1.08996 * 109.47438 * 305.00732 * 16 15 14 43 43 H 0.96690 * 114.00814 * 179.97438 * 17 16 15 44 44 H 1.08002 * 119.46407 * 179.97438 * 22 15 14 45 45 H 1.07997 * 119.72127 * 180.27116 * 24 23 22 46 46 H 1.08004 * 119.99934 * 179.72684 * 25 8 7 47 47 H 1.07999 * 120.00005 * 359.97438 * 26 5 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4840 1.7564 0.0000 4 6 2.4839 -0.8783 -1.5211 5 6 2.4856 -0.8805 1.5253 6 6 2.7160 -2.2431 1.4911 7 6 3.1762 -2.8948 2.6200 8 6 3.4055 -2.1839 3.7832 9 6 3.9068 -2.8945 5.0141 10 7 5.3718 -2.8946 5.0154 11 6 6.0447 -3.4779 6.0270 12 8 5.4362 -4.0043 6.9380 13 6 7.5231 -3.4785 6.0281 14 6 8.2340 -4.0813 7.0725 15 6 9.6168 -4.0549 7.0257 16 6 10.4282 -4.6902 8.1252 17 8 10.2044 -6.1016 8.1276 18 14 12.2371 -4.3488 7.8388 19 1 12.6469 -4.9172 6.5296 20 1 12.4696 -2.8822 7.8365 21 1 13.0366 -4.9755 8.9221 22 6 10.2464 -3.4392 5.9592 23 7 9.5503 -2.8788 4.9883 24 6 8.2337 -2.8829 4.9848 25 6 3.1697 -0.8223 3.8191 26 6 2.7155 -0.1696 2.6883 27 1 -0.3634 0.5140 0.8899 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3634 -1.0277 0.0005 30 1 3.5740 1.7564 -0.0005 31 1 2.1207 2.2702 -0.8901 32 1 2.1206 2.2703 0.8899 33 1 2.1206 -1.9060 -1.5210 34 1 2.1206 -0.3646 -2.4110 35 1 3.5740 -0.8787 -1.5208 36 1 2.5356 -2.7987 0.5827 37 1 3.3558 -3.9594 2.5934 38 1 3.5427 -2.3807 5.9038 39 1 3.5434 -3.9222 5.0136 40 1 5.8575 -2.4748 4.2882 41 1 7.7164 -4.5546 7.8939 42 1 10.1273 -4.2732 9.0862 43 1 10.6964 -6.5768 8.8110 44 1 11.3255 -3.4167 5.9203 45 1 7.6989 -2.4175 4.1700 46 1 3.3447 -0.2677 4.7292 47 1 2.5355 0.8950 2.7150 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10854838_13287814.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:37:22 Heat of formation + Delta-G solvation = -51.213907 kcal Electronic energy + Delta-G solvation = -26142.962128 eV Core-core repulsion = 22413.775460 eV Total energy + Delta-G solvation = -3729.186668 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 344.147 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -41.84616 -40.56125 -39.73430 -37.93646 -36.05904 -33.83039 -33.51482 -31.99107 -31.94340 -29.60921 -28.48956 -28.45110 -27.53525 -27.25454 -25.10031 -23.70405 -23.52987 -22.14841 -21.52441 -19.16539 -18.71464 -18.16279 -18.06473 -17.31829 -16.66845 -16.61153 -16.18011 -15.86987 -15.81716 -15.68579 -15.03630 -14.75773 -14.60814 -14.42529 -14.31612 -14.21085 -14.19973 -14.07630 -13.92579 -13.89853 -13.55898 -13.55408 -13.30136 -13.29649 -13.14414 -12.75431 -12.66329 -12.21190 -12.11116 -12.01652 -11.39179 -11.07414 -10.98771 -10.95144 -10.88293 -10.69291 -10.48988 -10.28278 -10.13057 -9.85191 -9.72571 -0.53899 0.02665 0.12324 0.47243 0.97103 1.30687 1.38084 1.65449 1.75411 1.77143 1.80242 1.83960 2.12448 2.49660 2.63911 2.90227 3.02958 3.22204 3.53315 3.61711 3.69132 3.71871 3.79485 3.85727 4.06310 4.07418 4.21257 4.33306 4.40868 4.44969 4.63555 4.64243 4.66065 4.67427 4.71118 4.72029 4.72985 4.73666 4.87279 4.94215 4.96479 5.10026 5.22714 5.34170 5.34521 5.41474 5.45638 5.50239 5.56805 5.57842 6.04867 6.34574 6.43948 6.65799 7.08074 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.450 4.450 2 Si 1.060 2.940 3 C -0.450 4.450 4 C -0.450 4.450 5 C -0.362 4.362 6 C -0.090 4.090 7 C -0.111 4.111 8 C -0.104 4.104 9 C 0.161 3.839 10 N -0.721 5.721 11 C 0.566 3.434 12 O -0.528 6.528 13 C -0.188 4.188 14 C 0.015 3.985 15 C -0.134 4.134 16 C -0.079 4.079 17 O -0.543 6.543 18 Si 0.939 3.061 19 H -0.243 1.243 20 H -0.245 1.245 21 H -0.249 1.249 22 C 0.123 3.877 23 N -0.477 5.477 24 C 0.139 3.861 25 C -0.111 4.111 26 C -0.090 4.090 27 H 0.069 0.931 28 H 0.071 0.929 29 H 0.069 0.931 30 H 0.070 0.930 31 H 0.072 0.928 32 H 0.069 0.931 33 H 0.069 0.931 34 H 0.072 0.928 35 H 0.070 0.930 36 H 0.123 0.877 37 H 0.121 0.879 38 H 0.080 0.920 39 H 0.080 0.920 40 H 0.402 0.598 41 H 0.153 0.847 42 H 0.083 0.917 43 H 0.384 0.616 44 H 0.157 0.843 45 H 0.162 0.838 46 H 0.121 0.879 47 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.863 2.101 -1.396 2.666 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.557 4.557 2 Si 1.252 2.748 3 C -0.558 4.558 4 C -0.558 4.558 5 C -0.403 4.403 6 C -0.108 4.108 7 C -0.130 4.130 8 C -0.105 4.105 9 C 0.038 3.962 10 N -0.373 5.373 11 C 0.352 3.648 12 O -0.405 6.405 13 C -0.193 4.193 14 C -0.011 4.011 15 C -0.136 4.136 16 C -0.190 4.190 17 O -0.350 6.350 18 Si 0.760 3.240 19 H -0.166 1.166 20 H -0.168 1.168 21 H -0.172 1.172 22 C -0.033 4.033 23 N -0.184 5.184 24 C -0.020 4.020 25 C -0.130 4.130 26 C -0.108 4.108 27 H 0.088 0.912 28 H 0.090 0.910 29 H 0.088 0.912 30 H 0.089 0.911 31 H 0.091 0.909 32 H 0.088 0.912 33 H 0.088 0.912 34 H 0.091 0.909 35 H 0.090 0.910 36 H 0.141 0.859 37 H 0.139 0.861 38 H 0.098 0.902 39 H 0.098 0.902 40 H 0.238 0.762 41 H 0.171 0.829 42 H 0.101 0.899 43 H 0.232 0.768 44 H 0.174 0.826 45 H 0.179 0.821 46 H 0.139 0.861 47 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges 1.354 2.411 -2.004 3.415 hybrid contribution -0.331 -0.527 1.015 1.191 sum 1.023 1.884 -0.989 2.361 Atomic orbital electron populations 1.26134 1.20476 1.04605 1.04524 0.78170 0.66860 0.66086 0.63679 1.26140 1.06459 1.18578 1.04598 1.26142 1.06461 1.08065 1.15116 1.27468 1.03074 0.99532 1.10261 1.21104 0.97227 0.94643 0.97810 1.21198 0.99161 0.99859 0.92740 1.19839 1.01533 0.94235 0.94857 1.20264 0.79026 1.01040 0.95843 1.45961 1.07272 1.58847 1.25225 1.17994 0.86481 0.78299 0.82043 1.90821 1.69493 1.44570 1.35631 1.21008 0.94342 1.05197 0.98775 1.21603 0.92655 0.90450 0.96402 1.20309 0.94543 1.01209 0.97521 1.24642 1.10322 0.84950 0.99042 1.86505 1.72426 1.16511 1.59525 0.85834 0.74144 0.81801 0.82199 1.16602 1.16788 1.17217 1.22864 1.00457 0.91735 0.88266 1.67735 1.08043 1.17000 1.25640 1.23036 0.90103 0.93154 0.95677 1.21191 0.99203 0.93759 0.98807 1.21101 0.97272 0.99784 0.92638 0.91165 0.91011 0.91159 0.91050 0.90932 0.91172 0.91171 0.90928 0.91050 0.85936 0.86066 0.90188 0.90183 0.76249 0.82908 0.89898 0.76759 0.82580 0.82143 0.86078 0.85940 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 0.84 8.65 101.05 0.87 1.71 16 2 Si 1.06 -3.30 12.32 -169.99 -2.09 -5.39 16 3 C -0.45 1.04 8.53 101.05 0.86 1.90 16 4 C -0.45 1.03 8.53 101.05 0.86 1.89 16 5 C -0.36 0.41 4.59 -39.58 -0.18 0.23 16 6 C -0.09 0.06 9.29 -39.58 -0.37 -0.31 16 7 C -0.11 0.03 9.70 -39.58 -0.38 -0.35 16 8 C -0.10 0.02 5.25 -104.62 -0.55 -0.53 16 9 C 0.16 0.04 5.80 -5.19 -0.03 0.01 16 10 N -0.72 -0.02 5.50 -62.43 -0.34 -0.36 16 11 C 0.57 1.49 7.78 -12.33 -0.10 1.39 16 12 O -0.53 -3.27 16.42 5.32 0.09 -3.19 16 13 C -0.19 -0.33 5.89 -104.82 -0.62 -0.95 16 14 C 0.02 0.03 9.38 -38.87 -0.36 -0.33 16 15 C -0.13 -0.15 5.38 -104.54 -0.56 -0.72 16 16 C -0.08 0.08 2.81 36.00 0.10 0.18 16 17 O -0.54 0.19 12.82 -35.23 -0.45 -0.26 16 18 Si 0.94 -1.52 25.16 -169.99 -4.28 -5.80 16 19 H -0.24 0.09 7.04 56.52 0.40 0.49 16 20 H -0.24 0.28 7.11 56.52 0.40 0.68 16 21 H -0.25 0.38 7.11 56.52 0.40 0.78 16 22 C 0.12 0.18 9.84 -17.47 -0.17 0.00 16 23 N -0.48 -1.07 10.35 -12.91 -0.13 -1.21 16 24 C 0.14 0.10 10.71 -17.13 -0.18 -0.09 16 25 C -0.11 0.04 9.70 -39.58 -0.38 -0.35 16 26 C -0.09 0.07 9.29 -39.58 -0.37 -0.30 16 27 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 28 H 0.07 -0.14 7.96 -51.93 -0.41 -0.56 16 29 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 30 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 31 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 32 H 0.07 -0.17 7.69 -51.93 -0.40 -0.57 16 33 H 0.07 -0.17 7.69 -51.93 -0.40 -0.57 16 34 H 0.07 -0.16 7.96 -51.93 -0.41 -0.58 16 35 H 0.07 -0.14 7.96 -51.92 -0.41 -0.56 16 36 H 0.12 -0.28 7.43 -52.49 -0.39 -0.67 16 37 H 0.12 -0.15 8.06 -52.49 -0.42 -0.57 16 38 H 0.08 0.05 8.08 -51.93 -0.42 -0.37 16 39 H 0.08 0.06 8.09 -51.93 -0.42 -0.36 16 40 H 0.40 -0.83 6.53 -40.82 -0.27 -1.10 16 41 H 0.15 0.32 7.74 -52.48 -0.41 -0.09 16 42 H 0.08 -0.24 7.96 -51.93 -0.41 -0.65 16 43 H 0.38 -1.86 8.74 45.56 0.40 -1.46 16 44 H 0.16 -0.05 4.87 -52.49 -0.26 -0.31 16 45 H 0.16 -0.38 6.42 -52.49 -0.34 -0.72 16 46 H 0.12 -0.16 8.06 -52.48 -0.42 -0.59 16 47 H 0.12 -0.29 7.43 -52.49 -0.39 -0.68 16 LS Contribution 395.49 15.07 5.96 5.96 Total: 0.00 -8.43 395.49 -9.05 -17.48 By element: Atomic # 1 Polarization: -4.40 SS G_CDS: -6.24 Total: -10.63 kcal Atomic # 6 Polarization: 4.96 SS G_CDS: -1.56 Total: 3.40 kcal Atomic # 7 Polarization: -1.09 SS G_CDS: -0.48 Total: -1.57 kcal Atomic # 8 Polarization: -3.09 SS G_CDS: -0.36 Total: -3.45 kcal Atomic # 14 Polarization: -4.82 SS G_CDS: -6.37 Total: -11.19 kcal Total LS contribution 5.96 Total: 5.96 kcal Total: -8.43 -9.05 -17.48 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10854838_13287814.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -33.732 kcal (2) G-P(sol) polarization free energy of solvation -8.429 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -42.162 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.052 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.481 kcal (6) G-S(sol) free energy of system = (1) + (5) -51.214 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds