Wall clock time and date at job start Sat Mar 6 2021 16:48:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86304 * 1 3 3 C 1.86300 * 109.47001 * 2 1 4 4 C 1.86299 * 109.46874 * 240.00203 * 2 1 3 5 5 C 1.86799 * 109.47028 * 120.00401 * 2 1 3 6 6 C 1.38234 * 120.00228 * 90.00161 * 5 2 1 7 7 C 1.38230 * 119.99885 * 180.02562 * 6 5 2 8 8 C 1.38235 * 120.00326 * 359.97438 * 7 6 5 9 9 C 1.50702 * 120.00236 * 179.70551 * 8 7 6 10 10 N 1.46500 * 109.47298 * 89.99945 * 9 8 7 11 11 C 1.34770 * 119.99686 * 180.02562 * 10 9 8 12 12 O 1.21280 * 120.00567 * 359.97438 * 11 10 9 13 13 C 1.50702 * 119.99863 * 179.97438 * 11 10 9 14 14 O 1.42898 * 109.47207 * 179.97438 * 13 11 10 15 15 C 1.35905 * 116.99833 * 180.02562 * 14 13 11 16 16 C 1.38724 * 120.05747 * 359.72741 * 15 14 13 17 17 C 1.38141 * 119.94607 * 179.74305 * 16 15 14 18 18 C 1.38278 * 120.05256 * 0.50609 * 17 16 15 19 19 C 1.50699 * 119.94006 * 179.74529 * 18 17 16 20 20 O 1.42900 * 109.46877 * 245.02208 * 19 18 17 21 21 Si 1.86294 * 109.47510 * 5.02462 * 19 18 17 22 22 H 1.48499 * 109.47324 * 59.99738 * 21 19 18 23 23 H 1.48501 * 109.47116 * 180.02562 * 21 19 18 24 24 H 1.48500 * 109.47036 * 299.99945 * 21 19 18 25 25 C 1.38264 * 120.11128 * 359.77006 * 18 17 16 26 26 C 1.38146 * 120.05428 * 359.97438 * 25 18 17 27 27 C 1.38234 * 119.99814 * 359.97438 * 8 7 6 28 28 C 1.38235 * 119.99567 * 270.01874 * 5 2 1 29 29 H 1.09001 * 109.47205 * 299.99925 * 1 2 3 30 30 H 1.08999 * 109.47227 * 59.99973 * 1 2 3 31 31 H 1.09001 * 109.47246 * 180.02562 * 1 2 3 32 32 H 1.09000 * 109.46574 * 179.97438 * 3 2 1 33 33 H 1.08999 * 109.47152 * 300.00073 * 3 2 1 34 34 H 1.09000 * 109.46711 * 60.00392 * 3 2 1 35 35 H 1.09007 * 109.47223 * 300.00044 * 4 2 1 36 36 H 1.08999 * 109.47337 * 59.99891 * 4 2 1 37 37 H 1.09000 * 109.47073 * 180.02562 * 4 2 1 38 38 H 1.07992 * 119.99701 * 359.97438 * 6 5 2 39 39 H 1.08000 * 120.00356 * 179.97438 * 7 6 5 40 40 H 1.09003 * 109.46871 * 209.99878 * 9 8 7 41 41 H 1.09001 * 109.47017 * 329.99216 * 9 8 7 42 42 H 0.96993 * 119.99824 * 0.02562 * 10 9 8 43 43 H 1.08994 * 109.47437 * 299.99933 * 13 11 10 44 44 H 1.09001 * 109.46970 * 60.00315 * 13 11 10 45 45 H 1.08006 * 120.02719 * 359.97438 * 16 15 14 46 46 H 1.07996 * 119.97695 * 180.23075 * 17 16 15 47 47 H 1.09002 * 109.46835 * 125.02719 * 19 18 17 48 48 H 0.96696 * 114.00163 * 180.02562 * 20 19 18 49 49 H 1.07992 * 119.97250 * 179.97438 * 25 18 17 50 50 H 1.08004 * 120.02518 * 179.97438 * 26 25 18 51 51 H 1.08001 * 120.00279 * 180.02562 * 27 8 7 52 52 H 1.07997 * 120.00423 * 359.97438 * 28 5 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4840 1.7565 0.0000 4 6 2.4840 -0.8782 -1.5212 5 6 2.4857 -0.8807 1.5252 6 6 2.7161 -2.2433 1.4909 7 6 3.1763 -2.8950 2.6197 8 6 3.4067 -2.1841 3.7827 9 6 3.9021 -2.8958 5.0152 10 7 5.3671 -2.9027 5.0195 11 6 6.0352 -3.4889 6.0325 12 8 5.4237 -4.0104 6.9409 13 6 7.5422 -3.4965 6.0367 14 8 8.0119 -4.1713 7.2055 15 6 9.3583 -4.2664 7.3638 16 6 10.2098 -3.7266 6.4109 17 6 11.5781 -3.8200 6.5767 18 6 12.0991 -4.4601 7.6862 19 6 13.5921 -4.5655 7.8616 20 8 13.9836 -5.9383 7.7965 21 14 14.4454 -3.6115 6.5080 22 1 14.0386 -2.1849 6.5757 23 1 15.9167 -3.7159 6.6807 24 1 14.0613 -4.1737 5.1884 25 6 11.2525 -5.0039 8.6345 26 6 9.8835 -4.9085 8.4758 27 6 3.1773 -0.8214 3.8166 28 6 2.7157 -0.1698 2.6882 29 1 -0.3634 0.5138 0.8900 30 1 -0.3633 0.5138 -0.8900 31 1 -0.3634 -1.0277 0.0005 32 1 3.5740 1.7564 0.0005 33 1 2.1207 2.2703 -0.8900 34 1 2.1207 2.2702 0.8900 35 1 2.1206 -1.9059 -1.5212 36 1 2.1206 -0.3644 -2.4111 37 1 3.5740 -0.8786 -1.5210 38 1 2.5358 -2.7987 0.5824 39 1 3.3560 -3.9596 2.5931 40 1 3.5386 -2.3794 5.9037 41 1 3.5339 -3.9217 5.0151 42 1 5.8561 -2.4853 4.2933 43 1 7.9054 -4.0128 5.1482 44 1 7.9107 -2.4707 6.0371 45 1 9.8033 -3.2304 5.5419 46 1 12.2414 -3.3966 5.8371 47 1 13.8741 -4.1528 8.8303 48 1 14.9339 -6.0817 7.9023 49 1 11.6618 -5.5037 9.4999 50 1 9.2227 -5.3339 9.2167 51 1 3.3576 -0.2659 4.7251 52 1 2.5358 0.8947 2.7150 RHF calculation, no. of doubly occupied orbitals= 67 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10854838_2989410.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:48:50 Heat of formation + Delta-G solvation = -96.777431 kcal Electronic energy + Delta-G solvation = -29406.947858 eV Core-core repulsion = 25266.991508 eV Total energy + Delta-G solvation = -4139.956350 eV No. of doubly occupied orbitals = 67 Molecular weight (most abundant/longest-lived isotopes) = 373.167 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -41.50982 -40.72146 -39.93256 -38.84621 -37.20642 -35.98491 -32.76359 -32.24124 -31.97678 -31.78010 -29.89078 -29.51169 -28.52038 -28.47578 -26.80037 -26.00483 -23.96974 -23.56288 -22.33754 -22.10688 -21.59053 -19.47836 -18.71107 -18.46466 -17.50031 -17.42657 -17.28639 -16.79731 -16.53963 -16.43520 -15.96078 -15.70820 -15.63072 -15.41424 -14.91523 -14.48129 -14.45782 -14.41651 -14.33508 -14.22069 -14.11718 -14.02340 -13.96835 -13.80472 -13.59189 -13.42939 -13.34180 -13.32075 -13.26979 -13.17146 -12.77735 -12.46806 -12.22483 -12.11067 -12.04397 -11.83635 -11.69445 -11.17437 -10.98120 -10.96303 -10.88732 -10.33865 -10.23516 -9.98731 -9.88568 -9.75548 -9.16142 0.08122 0.33083 0.35283 0.43903 1.12606 1.40536 1.46485 1.49260 1.49825 1.62530 1.77252 1.87201 1.88269 2.46741 2.56792 2.66977 2.90493 3.42093 3.48757 3.62536 3.74461 3.81484 3.83159 3.86969 3.90659 3.97146 4.03460 4.28409 4.30486 4.38302 4.41659 4.50282 4.61157 4.61606 4.63216 4.64515 4.68030 4.69037 4.69815 4.70466 4.70703 4.92066 4.98746 5.06755 5.19063 5.22228 5.29231 5.30892 5.38534 5.42488 5.47965 5.53577 5.54634 5.55973 5.71703 6.01570 6.24089 6.38438 6.58144 7.07805 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.450 4.450 2 Si 1.059 2.941 3 C -0.450 4.450 4 C -0.450 4.450 5 C -0.362 4.362 6 C -0.090 4.090 7 C -0.111 4.111 8 C -0.104 4.104 9 C 0.162 3.838 10 N -0.723 5.723 11 C 0.516 3.484 12 O -0.512 6.512 13 C 0.040 3.960 14 O -0.288 6.288 15 C 0.133 3.867 16 C -0.205 4.205 17 C -0.082 4.082 18 C -0.113 4.113 19 C -0.077 4.077 20 O -0.545 6.545 21 Si 0.945 3.055 22 H -0.250 1.250 23 H -0.257 1.257 24 H -0.249 1.249 25 C -0.048 4.048 26 C -0.145 4.145 27 C -0.111 4.111 28 C -0.090 4.090 29 H 0.069 0.931 30 H 0.071 0.929 31 H 0.069 0.931 32 H 0.070 0.930 33 H 0.072 0.928 34 H 0.069 0.931 35 H 0.069 0.931 36 H 0.072 0.928 37 H 0.070 0.930 38 H 0.123 0.877 39 H 0.121 0.879 40 H 0.079 0.921 41 H 0.079 0.921 42 H 0.404 0.596 43 H 0.095 0.905 44 H 0.095 0.905 45 H 0.131 0.869 46 H 0.123 0.877 47 H 0.076 0.924 48 H 0.380 0.620 49 H 0.135 0.865 50 H 0.137 0.863 51 H 0.121 0.879 52 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.845 3.911 -4.527 6.261 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.557 4.557 2 Si 1.251 2.749 3 C -0.558 4.558 4 C -0.558 4.558 5 C -0.404 4.404 6 C -0.108 4.108 7 C -0.130 4.130 8 C -0.104 4.104 9 C 0.040 3.960 10 N -0.378 5.378 11 C 0.300 3.700 12 O -0.386 6.386 13 C -0.038 4.038 14 O -0.200 6.200 15 C 0.088 3.912 16 C -0.224 4.224 17 C -0.100 4.100 18 C -0.113 4.113 19 C -0.187 4.187 20 O -0.351 6.351 21 Si 0.768 3.232 22 H -0.174 1.174 23 H -0.181 1.181 24 H -0.172 1.172 25 C -0.066 4.066 26 C -0.163 4.163 27 C -0.130 4.130 28 C -0.108 4.108 29 H 0.088 0.912 30 H 0.090 0.910 31 H 0.089 0.911 32 H 0.089 0.911 33 H 0.091 0.909 34 H 0.088 0.912 35 H 0.088 0.912 36 H 0.091 0.909 37 H 0.089 0.911 38 H 0.141 0.859 39 H 0.139 0.861 40 H 0.097 0.903 41 H 0.098 0.902 42 H 0.238 0.762 43 H 0.113 0.887 44 H 0.113 0.887 45 H 0.149 0.851 46 H 0.141 0.859 47 H 0.094 0.906 48 H 0.227 0.773 49 H 0.153 0.847 50 H 0.155 0.845 51 H 0.139 0.861 52 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges 1.016 3.794 -4.394 5.894 hybrid contribution 0.712 0.087 -0.036 0.718 sum 1.728 3.881 -4.431 6.138 Atomic orbital electron populations 1.26131 1.20437 1.04625 1.04544 0.78188 0.66919 0.66104 0.63685 1.26138 1.06422 1.18570 1.04627 1.26140 1.06423 1.08079 1.15121 1.27470 1.03092 0.99545 1.10251 1.21101 0.97233 0.94638 0.97825 1.21192 0.99173 0.99849 0.92737 1.19833 1.01550 0.94199 0.94822 1.20244 0.78965 1.01011 0.95790 1.45882 1.07228 1.59405 1.25287 1.20042 0.88819 0.78775 0.82355 1.90794 1.69394 1.43236 1.35150 1.22459 0.92770 0.99212 0.89399 1.86170 1.19171 1.72990 1.41672 1.19059 0.81698 0.95670 0.94789 1.21117 0.93849 1.06606 1.00793 1.20764 0.94887 0.98041 0.96273 1.19171 0.93728 1.02176 0.96229 1.24659 0.96073 0.89512 1.08496 1.86519 1.29033 1.23242 1.96295 0.85779 0.79165 0.79265 0.79031 1.17373 1.18079 1.17232 1.20831 0.91542 0.95774 0.98418 1.20522 0.95300 1.02848 0.97672 1.21192 0.99181 0.93766 0.98816 1.21104 0.97237 0.99806 0.92658 0.91151 0.90993 0.91148 0.91080 0.90902 0.91161 0.91159 0.90904 0.91079 0.85935 0.86072 0.90253 0.90248 0.76198 0.88686 0.88692 0.85080 0.85918 0.90638 0.77322 0.84693 0.84524 0.86076 0.85936 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 0.91 8.65 101.05 0.87 1.78 16 2 Si 1.06 -3.52 12.32 -169.99 -2.09 -5.62 16 3 C -0.45 1.16 8.53 101.05 0.86 2.02 16 4 C -0.45 1.15 8.53 101.05 0.86 2.01 16 5 C -0.36 0.50 4.59 -39.58 -0.18 0.32 16 6 C -0.09 0.09 9.29 -39.59 -0.37 -0.28 16 7 C -0.11 0.07 9.70 -39.59 -0.38 -0.32 16 8 C -0.10 0.05 5.25 -104.62 -0.55 -0.50 16 9 C 0.16 -0.01 5.80 -5.19 -0.03 -0.04 16 10 N -0.72 0.61 5.55 -61.47 -0.34 0.27 16 11 C 0.52 1.01 7.91 -10.99 -0.09 0.92 16 12 O -0.51 -3.55 16.50 -14.35 -0.24 -3.78 16 13 C 0.04 -0.01 5.22 36.01 0.19 0.18 16 14 O -0.29 -1.00 9.67 -39.35 -0.38 -1.38 16 15 C 0.13 0.35 6.69 -39.22 -0.26 0.09 16 16 C -0.20 -0.20 9.04 -39.44 -0.36 -0.55 16 17 C -0.08 -0.10 8.66 -39.60 -0.34 -0.45 16 18 C -0.11 -0.19 5.39 -104.60 -0.56 -0.75 16 19 C -0.08 0.02 2.79 36.01 0.10 0.12 16 20 O -0.54 -0.20 12.81 -35.23 -0.45 -0.65 16 21 Si 0.94 -0.62 25.14 -169.99 -4.27 -4.89 16 22 H -0.25 0.04 7.11 56.52 0.40 0.44 16 23 H -0.26 0.13 7.11 56.52 0.40 0.53 16 24 H -0.25 -0.16 7.04 56.52 0.40 0.24 16 25 C -0.05 -0.09 9.68 -39.61 -0.38 -0.47 16 26 C -0.14 -0.36 9.99 -39.43 -0.39 -0.76 16 27 C -0.11 0.07 9.70 -39.58 -0.38 -0.32 16 28 C -0.09 0.09 9.29 -39.58 -0.37 -0.28 16 29 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 30 H 0.07 -0.16 7.96 -51.93 -0.41 -0.57 16 31 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 32 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 33 H 0.07 -0.18 7.96 -51.93 -0.41 -0.60 16 34 H 0.07 -0.19 7.69 -51.93 -0.40 -0.59 16 35 H 0.07 -0.18 7.69 -51.93 -0.40 -0.58 16 36 H 0.07 -0.18 7.96 -51.93 -0.41 -0.60 16 37 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 38 H 0.12 -0.32 7.43 -52.49 -0.39 -0.71 16 39 H 0.12 -0.19 8.06 -52.49 -0.42 -0.61 16 40 H 0.08 0.05 8.08 -51.93 -0.42 -0.37 16 41 H 0.08 0.05 8.09 -51.93 -0.42 -0.37 16 42 H 0.40 -1.38 8.46 -40.82 -0.35 -1.73 16 43 H 0.10 -0.26 7.65 -51.93 -0.40 -0.65 16 44 H 0.10 -0.27 7.67 -51.93 -0.40 -0.67 16 45 H 0.13 -0.25 6.30 -52.48 -0.33 -0.58 16 46 H 0.12 -0.03 4.86 -52.49 -0.25 -0.29 16 47 H 0.08 -0.15 7.96 -51.93 -0.41 -0.56 16 48 H 0.38 -1.54 8.74 45.56 0.40 -1.14 16 49 H 0.14 0.04 8.06 -52.49 -0.42 -0.38 16 50 H 0.14 0.24 8.06 -52.48 -0.42 -0.18 16 51 H 0.12 -0.19 8.06 -52.49 -0.42 -0.62 16 52 H 0.12 -0.32 7.43 -52.49 -0.39 -0.71 16 LS Contribution 433.95 15.07 6.54 6.54 Total: 0.00 -9.75 433.95 -10.55 -20.30 By element: Atomic # 1 Polarization: -5.97 SS G_CDS: -7.55 Total: -13.52 kcal Atomic # 6 Polarization: 4.50 SS G_CDS: -1.77 Total: 2.73 kcal Atomic # 7 Polarization: 0.61 SS G_CDS: -0.34 Total: 0.27 kcal Atomic # 8 Polarization: -4.75 SS G_CDS: -1.07 Total: -5.82 kcal Atomic # 14 Polarization: -4.14 SS G_CDS: -6.37 Total: -10.51 kcal Total LS contribution 6.54 Total: 6.54 kcal Total: -9.75 -10.55 -20.30 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10854838_2989410.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -76.475 kcal (2) G-P(sol) polarization free energy of solvation -9.754 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -86.228 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.549 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.303 kcal (6) G-S(sol) free energy of system = (1) + (5) -96.777 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds