Wall clock time and date at job start Sat Mar 6 2021 17:03:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46497 * 1 3 3 C 1.37638 * 125.67764 * 2 1 4 4 C 1.46666 * 126.22589 * 0.24082 * 3 2 1 5 5 O 1.21698 * 120.00323 * 354.25941 * 4 3 2 6 6 N 1.34778 * 120.00244 * 174.25782 * 4 3 2 7 7 C 1.46502 * 120.00263 * 185.11122 * 6 4 3 8 8 C 1.50696 * 109.46897 * 180.02562 * 7 6 4 9 9 C 1.38244 * 119.99583 * 269.71998 * 8 7 6 10 10 C 1.38240 * 119.99771 * 179.76996 * 9 8 7 11 11 C 1.38237 * 119.99676 * 0.51157 * 10 9 8 12 12 Si 1.86794 * 119.99618 * 179.72528 * 11 10 9 13 13 C 1.86305 * 109.47305 * 270.01876 * 12 11 10 14 14 C 1.86303 * 109.47315 * 30.02138 * 12 11 10 15 15 C 1.86304 * 109.47243 * 150.02026 * 12 11 10 16 16 C 1.38233 * 120.00144 * 359.73981 * 11 10 9 17 17 C 1.38228 * 120.00262 * 0.02562 * 16 11 10 18 18 C 1.37888 * 107.54764 * 179.97438 * 3 2 1 19 19 C 1.39877 * 107.09228 * 359.97438 * 18 3 2 20 20 Br 1.89106 * 126.06982 * 179.97438 * 19 18 3 21 21 C 1.35495 * 107.85689 * 359.97438 * 19 18 3 22 22 C 1.50694 * 125.57663 * 179.97438 * 21 19 18 23 23 O 1.42908 * 109.46984 * 304.44723 * 22 21 19 24 24 Si 1.86304 * 109.47136 * 64.44432 * 22 21 19 25 25 H 1.48496 * 109.46686 * 64.91987 * 24 22 21 26 26 H 1.48500 * 109.47126 * 184.91951 * 24 22 21 27 27 H 1.48501 * 109.47001 * 304.92410 * 24 22 21 28 28 H 1.09000 * 109.47310 * 84.66679 * 1 2 3 29 29 H 1.09001 * 109.47260 * 204.66669 * 1 2 3 30 30 H 1.09003 * 109.47288 * 324.66310 * 1 2 3 31 31 H 0.96998 * 119.99950 * 5.10679 * 6 4 3 32 32 H 1.09000 * 109.46747 * 300.00018 * 7 6 4 33 33 H 1.08996 * 109.46957 * 59.99707 * 7 6 4 34 34 H 1.07997 * 120.00182 * 0.02562 * 9 8 7 35 35 H 1.07994 * 119.99883 * 180.23188 * 10 9 8 36 36 H 1.08997 * 109.46464 * 60.00058 * 13 12 11 37 37 H 1.08994 * 109.47278 * 180.02562 * 13 12 11 38 38 H 1.08994 * 109.46507 * 300.00424 * 13 12 11 39 39 H 1.08994 * 109.47200 * 59.99679 * 14 12 11 40 40 H 1.09005 * 109.47425 * 180.02562 * 14 12 11 41 41 H 1.08999 * 109.46909 * 299.99671 * 14 12 11 42 42 H 1.08993 * 109.47334 * 59.99738 * 15 12 11 43 43 H 1.08994 * 109.47494 * 179.97438 * 15 12 11 44 44 H 1.09003 * 109.46980 * 299.99792 * 15 12 11 45 45 H 1.08006 * 119.99728 * 179.97438 * 16 11 10 46 46 H 1.08000 * 120.00247 * 179.97438 * 17 16 11 47 47 H 1.08005 * 126.45294 * 180.02562 * 18 3 2 48 48 H 1.09003 * 109.47848 * 184.44728 * 22 21 19 49 49 H 0.96697 * 114.00072 * 60.00052 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2677 1.1180 0.0000 4 6 1.8121 2.5122 0.0050 5 8 0.6260 2.7651 -0.0958 6 7 2.7071 3.5132 0.1212 7 6 2.2454 4.8986 0.2388 8 6 3.4351 5.8164 0.3541 9 6 3.9474 6.1308 1.5990 10 6 5.0417 6.9689 1.7045 11 6 5.6170 7.5010 0.5657 12 14 7.0909 8.6397 0.7088 13 6 6.5027 10.4011 0.8583 14 6 8.0822 8.1855 2.2194 15 6 8.1578 8.4680 -0.8088 16 6 5.1015 7.1907 -0.6788 17 6 4.0103 6.3488 -0.7846 18 6 3.5781 0.6890 0.0006 19 6 3.5528 -0.7096 0.0015 20 35 5.0609 -1.8505 0.0020 21 6 2.2558 -1.1016 0.0021 22 6 1.7712 -2.5285 0.0026 23 8 2.3393 -3.2249 -1.1085 24 14 2.2896 -3.3598 1.5873 25 1 1.6050 -2.7102 2.7338 26 1 1.9169 -4.7964 1.5375 27 1 3.7600 -3.2353 1.7536 28 1 -0.3634 0.0955 -1.0232 29 1 -0.3634 -0.9339 0.4289 30 1 -0.3634 0.8383 0.5944 31 1 3.6569 3.3164 0.1269 32 1 1.6659 5.1647 -0.6452 33 1 1.6210 4.9993 1.1265 34 1 3.4953 5.7183 2.4889 35 1 5.4442 7.2115 2.6768 36 1 5.8785 10.5014 1.7462 37 1 7.3627 11.0655 0.9413 38 1 5.9227 10.6666 -0.0255 39 1 8.4263 7.1551 2.1319 40 1 8.9421 8.8503 2.3031 41 1 7.4580 8.2860 3.1072 42 1 7.5779 8.7337 -1.6926 43 1 9.0176 9.1328 -0.7256 44 1 8.5020 7.4375 -0.8963 45 1 5.5508 7.6069 -1.5684 46 1 3.6072 6.1067 -1.7569 47 1 4.4583 1.3149 0.0011 48 1 0.6842 -2.5433 -0.0767 49 1 3.3059 -3.2518 -1.1033 RHF calculation, no. of doubly occupied orbitals= 65 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10854838_5000100.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 17:03:49 Heat of formation + Delta-G solvation = -38.618677 kcal Electronic energy + Delta-G solvation = -29275.755875 eV Core-core repulsion = 25179.985896 eV Total energy + Delta-G solvation = -4095.769979 eV No. of doubly occupied orbitals = 65 Molecular weight (most abundant/longest-lived isotopes) = 424.073 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -42.84696 -40.67673 -39.74981 -37.88299 -36.12078 -34.48508 -32.83542 -31.95119 -31.81934 -30.93647 -29.61417 -28.49353 -28.45734 -27.85763 -27.40729 -25.99287 -23.53864 -23.33569 -22.17425 -21.40535 -20.57218 -19.16159 -18.43841 -17.53103 -17.29626 -17.02783 -16.68626 -16.33041 -16.11552 -15.91137 -15.46691 -15.38952 -14.93787 -14.64665 -14.43764 -14.38915 -14.29207 -14.25535 -14.19336 -14.06590 -13.94156 -13.90241 -13.59773 -13.57002 -13.30607 -13.30325 -13.25153 -13.14908 -12.79855 -12.75164 -12.65878 -12.23299 -12.02440 -11.71869 -11.28262 -11.05771 -10.95561 -10.89585 -10.86431 -10.74774 -10.25122 -9.85925 -9.79579 -9.74081 -9.25252 0.10588 0.17737 0.46659 0.54408 0.84312 1.17639 1.40629 1.46499 1.58348 1.65005 1.79739 1.87505 1.93532 2.21471 2.31596 2.49144 2.90999 3.16708 3.42047 3.53017 3.62287 3.69139 3.84398 3.85933 4.05784 4.13278 4.26462 4.31289 4.40400 4.44167 4.55760 4.57790 4.63638 4.65594 4.66952 4.68368 4.70862 4.71496 4.72411 4.72923 4.94130 5.09187 5.19858 5.30986 5.33612 5.40996 5.45205 5.49706 5.56187 5.56758 5.58696 5.79913 6.04087 6.30632 6.35140 7.04932 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.063 3.937 2 N -0.387 5.387 3 C -0.036 4.036 4 C 0.592 3.408 5 O -0.541 6.541 6 N -0.713 5.713 7 C 0.164 3.836 8 C -0.104 4.104 9 C -0.110 4.110 10 C -0.090 4.090 11 C -0.361 4.361 12 Si 1.060 2.940 13 C -0.450 4.450 14 C -0.450 4.450 15 C -0.450 4.450 16 C -0.090 4.090 17 C -0.110 4.110 18 C -0.104 4.104 19 C -0.177 4.177 20 Br -0.017 7.017 21 C 0.057 3.943 22 C -0.063 4.063 23 O -0.527 6.527 24 Si 0.923 3.077 25 H -0.246 1.246 26 H -0.237 1.237 27 H -0.214 1.214 28 H 0.087 0.913 29 H 0.089 0.911 30 H 0.105 0.895 31 H 0.405 0.595 32 H 0.080 0.920 33 H 0.079 0.921 34 H 0.121 0.879 35 H 0.123 0.877 36 H 0.069 0.931 37 H 0.071 0.929 38 H 0.069 0.931 39 H 0.070 0.930 40 H 0.072 0.928 41 H 0.069 0.931 42 H 0.069 0.931 43 H 0.072 0.928 44 H 0.070 0.930 45 H 0.123 0.877 46 H 0.121 0.879 47 H 0.157 0.843 48 H 0.121 0.879 49 H 0.376 0.624 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.478 1.810 1.604 3.463 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 N -0.060 5.060 3 C -0.150 4.150 4 C 0.379 3.621 5 O -0.419 6.419 6 N -0.365 5.365 7 C 0.041 3.959 8 C -0.105 4.105 9 C -0.129 4.129 10 C -0.108 4.108 11 C -0.403 4.403 12 Si 1.252 2.748 13 C -0.557 4.557 14 C -0.558 4.558 15 C -0.558 4.558 16 C -0.108 4.108 17 C -0.129 4.129 18 C -0.131 4.131 19 C -0.263 4.263 20 Br 0.067 6.933 21 C -0.065 4.065 22 C -0.173 4.173 23 O -0.334 6.334 24 Si 0.739 3.261 25 H -0.169 1.169 26 H -0.160 1.160 27 H -0.135 1.135 28 H 0.106 0.894 29 H 0.107 0.893 30 H 0.124 0.876 31 H 0.241 0.759 32 H 0.098 0.902 33 H 0.097 0.903 34 H 0.139 0.861 35 H 0.141 0.859 36 H 0.088 0.912 37 H 0.090 0.910 38 H 0.088 0.912 39 H 0.090 0.910 40 H 0.091 0.909 41 H 0.088 0.912 42 H 0.088 0.912 43 H 0.091 0.909 44 H 0.090 0.910 45 H 0.141 0.859 46 H 0.139 0.861 47 H 0.174 0.826 48 H 0.139 0.861 49 H 0.227 0.773 Dipole moment (debyes) X Y Z Total from point charges 1.329 1.102 2.142 2.751 hybrid contribution 0.309 0.502 -0.426 0.727 sum 1.637 1.604 1.717 2.864 Atomic orbital electron populations 1.22410 0.74837 1.05249 1.05267 1.43753 1.07216 1.03845 1.51180 1.19996 0.89711 0.87772 1.17503 1.16818 0.85618 0.83150 0.76478 1.90842 1.16179 1.84654 1.50241 1.45689 1.10058 1.05929 1.74808 1.20247 0.93905 0.78374 1.03327 1.19813 0.97387 0.99325 0.93936 1.21188 0.96678 0.98288 0.96734 1.21100 0.95093 0.95947 0.98665 1.27466 1.11350 1.07124 0.94338 0.78175 0.63935 0.65432 0.67279 1.26131 1.06162 1.18712 1.04735 1.26140 1.09089 1.05661 1.14876 1.26140 1.09801 1.04827 1.15009 1.21101 0.95361 0.96619 0.97710 1.21190 0.96381 0.97441 0.97862 1.21179 0.95229 0.92836 1.03848 1.20676 0.90946 0.94659 1.20019 1.96646 1.36485 1.62121 1.98021 1.20881 0.89516 0.90078 1.06031 1.24735 1.02817 0.87450 1.02324 1.86552 1.26301 1.75181 1.45373 0.86009 0.84702 0.81018 0.74365 1.16922 1.15967 1.13506 0.89403 0.89272 0.87606 0.75923 0.90150 0.90273 0.86096 0.85942 0.91167 0.91010 0.91166 0.91038 0.90929 0.91181 0.91175 0.90930 0.91039 0.85934 0.86075 0.82577 0.86140 0.77327 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.03 10.10 59.85 0.60 0.58 16 2 N -0.39 -0.62 3.16 -115.59 -0.37 -0.99 16 3 C -0.04 -0.07 6.88 -81.99 -0.56 -0.63 16 4 C 0.59 1.35 7.77 -12.86 -0.10 1.25 16 5 O -0.54 -2.70 14.88 5.19 0.08 -2.62 16 6 N -0.71 0.09 5.53 -62.80 -0.35 -0.26 16 7 C 0.16 -0.02 5.81 -5.19 -0.03 -0.05 16 8 C -0.10 0.04 5.25 -104.62 -0.55 -0.50 16 9 C -0.11 0.06 9.70 -39.58 -0.38 -0.32 16 10 C -0.09 0.08 9.29 -39.58 -0.37 -0.29 16 11 C -0.36 0.46 4.59 -39.58 -0.18 0.28 16 12 Si 1.06 -3.42 12.32 -169.99 -2.09 -5.51 16 13 C -0.45 0.88 8.65 101.05 0.87 1.76 16 14 C -0.45 1.09 8.53 101.05 0.86 1.95 16 15 C -0.45 1.07 8.53 101.05 0.86 1.94 16 16 C -0.09 0.08 9.29 -39.59 -0.37 -0.29 16 17 C -0.11 0.05 9.70 -39.59 -0.38 -0.34 16 18 C -0.10 -0.08 10.34 -39.10 -0.40 -0.49 16 19 C -0.18 -0.26 6.08 -39.95 -0.24 -0.50 16 20 Br -0.02 -0.01 28.79 -68.01 -1.96 -1.97 16 21 C 0.06 0.08 5.32 -81.91 -0.44 -0.35 16 22 C -0.06 -0.02 2.79 36.00 0.10 0.08 16 23 O -0.53 -0.85 12.88 -35.23 -0.45 -1.31 16 24 Si 0.92 -0.10 26.85 -169.99 -4.56 -4.67 16 25 H -0.25 -0.14 7.11 56.52 0.40 0.26 16 26 H -0.24 -0.13 7.11 56.52 0.40 0.27 16 27 H -0.21 0.01 5.54 56.52 0.31 0.32 16 28 H 0.09 -0.05 8.14 -51.93 -0.42 -0.47 16 29 H 0.09 -0.26 6.80 -51.93 -0.35 -0.62 16 30 H 0.11 0.04 6.76 -51.93 -0.35 -0.31 16 31 H 0.41 -0.75 7.37 -40.82 -0.30 -1.05 16 32 H 0.08 0.03 8.08 -51.93 -0.42 -0.39 16 33 H 0.08 0.01 8.08 -51.93 -0.42 -0.41 16 34 H 0.12 -0.19 8.06 -52.49 -0.42 -0.61 16 35 H 0.12 -0.31 7.43 -52.49 -0.39 -0.70 16 36 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 37 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 38 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 39 H 0.07 -0.15 7.96 -51.93 -0.41 -0.57 16 40 H 0.07 -0.17 7.96 -51.93 -0.41 -0.59 16 41 H 0.07 -0.18 7.69 -51.93 -0.40 -0.58 16 42 H 0.07 -0.17 7.69 -51.93 -0.40 -0.57 16 43 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 44 H 0.07 -0.15 7.96 -51.93 -0.41 -0.57 16 45 H 0.12 -0.30 7.43 -52.48 -0.39 -0.69 16 46 H 0.12 -0.16 8.06 -52.49 -0.42 -0.59 16 47 H 0.16 -0.25 7.45 -52.48 -0.39 -0.65 16 48 H 0.12 -0.18 6.43 -51.93 -0.33 -0.52 16 49 H 0.38 0.08 6.18 45.56 0.28 0.36 16 LS Contribution 420.18 15.07 6.33 6.33 Total: 0.00 -6.78 420.18 -11.00 -17.78 By element: Atomic # 1 Polarization: -3.95 SS G_CDS: -6.91 Total: -10.86 kcal Atomic # 6 Polarization: 4.78 SS G_CDS: -0.71 Total: 4.07 kcal Atomic # 7 Polarization: -0.53 SS G_CDS: -0.71 Total: -1.25 kcal Atomic # 8 Polarization: -3.55 SS G_CDS: -0.38 Total: -3.93 kcal Atomic # 14 Polarization: -3.52 SS G_CDS: -6.66 Total: -10.18 kcal Atomic # 35 Polarization: -0.01 SS G_CDS: -1.96 Total: -1.97 kcal Total LS contribution 6.33 Total: 6.33 kcal Total: -6.78 -11.00 -17.78 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10854838_5000100.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -20.841 kcal (2) G-P(sol) polarization free energy of solvation -6.781 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -27.622 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.996 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.777 kcal (6) G-S(sol) free energy of system = (1) + (5) -38.619 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds