Wall clock time and date at job start Sat Mar 6 2021 17:03:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46497 * 1 3 3 C 1.37638 * 125.67764 * 2 1 4 4 C 1.46666 * 126.22589 * 0.24082 * 3 2 1 5 5 O 1.21698 * 120.00323 * 354.25941 * 4 3 2 6 6 N 1.34778 * 120.00244 * 174.25782 * 4 3 2 7 7 C 1.46502 * 120.00263 * 185.11122 * 6 4 3 8 8 C 1.50696 * 109.46897 * 180.02562 * 7 6 4 9 9 C 1.38244 * 119.99583 * 269.71998 * 8 7 6 10 10 C 1.38240 * 119.99771 * 179.76996 * 9 8 7 11 11 C 1.38237 * 119.99676 * 0.51157 * 10 9 8 12 12 Si 1.86794 * 119.99618 * 179.72528 * 11 10 9 13 13 C 1.86305 * 109.47305 * 270.01876 * 12 11 10 14 14 C 1.86303 * 109.47315 * 30.02138 * 12 11 10 15 15 C 1.86304 * 109.47243 * 150.02026 * 12 11 10 16 16 C 1.38233 * 120.00144 * 359.73981 * 11 10 9 17 17 C 1.38228 * 120.00262 * 0.02562 * 16 11 10 18 18 C 1.37888 * 107.54764 * 179.97438 * 3 2 1 19 19 C 1.39877 * 107.09228 * 359.97438 * 18 3 2 20 20 Br 1.89106 * 126.06982 * 179.97438 * 19 18 3 21 21 C 1.35495 * 107.85689 * 359.97438 * 19 18 3 22 22 C 1.50694 * 125.57663 * 179.97438 * 21 19 18 23 23 O 1.42908 * 109.46984 * 304.44723 * 22 21 19 24 24 Si 1.86304 * 109.47136 * 64.44432 * 22 21 19 25 25 H 1.48496 * 109.46686 * 64.91987 * 24 22 21 26 26 H 1.48500 * 109.47126 * 184.91951 * 24 22 21 27 27 H 1.48501 * 109.47001 * 304.92410 * 24 22 21 28 28 H 1.09000 * 109.47310 * 84.66679 * 1 2 3 29 29 H 1.09001 * 109.47260 * 204.66669 * 1 2 3 30 30 H 1.09003 * 109.47288 * 324.66310 * 1 2 3 31 31 H 0.96998 * 119.99950 * 5.10679 * 6 4 3 32 32 H 1.09000 * 109.46747 * 300.00018 * 7 6 4 33 33 H 1.08996 * 109.46957 * 59.99707 * 7 6 4 34 34 H 1.07997 * 120.00182 * 0.02562 * 9 8 7 35 35 H 1.07994 * 119.99883 * 180.23188 * 10 9 8 36 36 H 1.08997 * 109.46464 * 60.00058 * 13 12 11 37 37 H 1.08994 * 109.47278 * 180.02562 * 13 12 11 38 38 H 1.08994 * 109.46507 * 300.00424 * 13 12 11 39 39 H 1.08994 * 109.47200 * 59.99679 * 14 12 11 40 40 H 1.09005 * 109.47425 * 180.02562 * 14 12 11 41 41 H 1.08999 * 109.46909 * 299.99671 * 14 12 11 42 42 H 1.08993 * 109.47334 * 59.99738 * 15 12 11 43 43 H 1.08994 * 109.47494 * 179.97438 * 15 12 11 44 44 H 1.09003 * 109.46980 * 299.99792 * 15 12 11 45 45 H 1.08006 * 119.99728 * 179.97438 * 16 11 10 46 46 H 1.08000 * 120.00247 * 179.97438 * 17 16 11 47 47 H 1.08005 * 126.45294 * 180.02562 * 18 3 2 48 48 H 1.09003 * 109.47848 * 184.44728 * 22 21 19 49 49 H 0.96697 * 114.00072 * 60.00052 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2677 1.1180 0.0000 4 6 1.8121 2.5122 0.0050 5 8 0.6260 2.7651 -0.0958 6 7 2.7071 3.5132 0.1212 7 6 2.2454 4.8986 0.2388 8 6 3.4351 5.8164 0.3541 9 6 3.9474 6.1308 1.5990 10 6 5.0417 6.9689 1.7045 11 6 5.6170 7.5010 0.5657 12 14 7.0909 8.6397 0.7088 13 6 6.5027 10.4011 0.8583 14 6 8.0822 8.1855 2.2194 15 6 8.1578 8.4680 -0.8088 16 6 5.1015 7.1907 -0.6788 17 6 4.0103 6.3488 -0.7846 18 6 3.5781 0.6890 0.0006 19 6 3.5528 -0.7096 0.0015 20 35 5.0609 -1.8505 0.0020 21 6 2.2558 -1.1016 0.0021 22 6 1.7712 -2.5285 0.0026 23 8 2.3393 -3.2249 -1.1085 24 14 2.2896 -3.3598 1.5873 25 1 1.6050 -2.7102 2.7338 26 1 1.9169 -4.7964 1.5375 27 1 3.7600 -3.2353 1.7536 28 1 -0.3634 0.0955 -1.0232 29 1 -0.3634 -0.9339 0.4289 30 1 -0.3634 0.8383 0.5944 31 1 3.6569 3.3164 0.1269 32 1 1.6659 5.1647 -0.6452 33 1 1.6210 4.9993 1.1265 34 1 3.4953 5.7183 2.4889 35 1 5.4442 7.2115 2.6768 36 1 5.8785 10.5014 1.7462 37 1 7.3627 11.0655 0.9413 38 1 5.9227 10.6666 -0.0255 39 1 8.4263 7.1551 2.1319 40 1 8.9421 8.8503 2.3031 41 1 7.4580 8.2860 3.1072 42 1 7.5779 8.7337 -1.6926 43 1 9.0176 9.1328 -0.7256 44 1 8.5020 7.4375 -0.8963 45 1 5.5508 7.6069 -1.5684 46 1 3.6072 6.1067 -1.7569 47 1 4.4583 1.3149 0.0011 48 1 0.6842 -2.5433 -0.0767 49 1 3.3059 -3.2518 -1.1033 RHF calculation, no. of doubly occupied orbitals= 65 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10854838_5000100.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 17:03:48 Heat of formation + Delta-G solvation = -30.813469 kcal Electronic energy + Delta-G solvation = -29275.417415 eV Core-core repulsion = 25179.985896 eV Total energy + Delta-G solvation = -4095.431520 eV No. of doubly occupied orbitals = 65 Molecular weight (most abundant/longest-lived isotopes) = 424.073 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -42.90657 -40.71884 -39.76577 -37.94752 -36.20518 -34.51265 -32.86580 -31.84695 -31.82554 -30.97565 -29.41687 -28.27454 -28.26125 -27.87266 -27.40997 -26.00536 -23.44075 -23.40499 -22.11864 -21.48098 -20.63425 -19.19852 -18.48342 -17.49061 -17.38629 -17.08923 -16.70743 -16.31173 -16.13231 -15.84061 -15.51662 -15.42551 -14.97863 -14.68940 -14.40720 -14.31657 -14.28894 -14.13476 -14.01778 -13.92590 -13.88832 -13.79808 -13.61249 -13.44375 -13.23744 -13.13336 -13.09673 -12.95155 -12.81695 -12.68774 -12.65105 -12.26992 -11.90913 -11.76550 -11.42723 -10.93634 -10.88751 -10.78855 -10.74864 -10.74000 -10.34862 -9.84531 -9.77799 -9.65325 -9.32265 0.08964 0.18636 0.48986 0.54895 0.81504 1.13165 1.40737 1.45603 1.57388 1.86594 1.91176 2.04535 2.07463 2.09016 2.31686 2.68477 2.98798 3.15059 3.41309 3.51505 3.63830 3.70224 3.88594 3.91661 4.17252 4.18251 4.29419 4.35246 4.38144 4.55493 4.57428 4.60153 4.66307 4.76720 4.85552 4.85669 4.89945 4.91305 4.91613 4.92044 5.02646 5.15270 5.19864 5.26823 5.42657 5.53651 5.60618 5.60744 5.64048 5.69025 5.73274 5.76359 6.14737 6.30034 6.31417 6.95148 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.059 3.941 2 N -0.394 5.394 3 C -0.053 4.053 4 C 0.591 3.409 5 O -0.574 6.574 6 N -0.700 5.700 7 C 0.168 3.832 8 C -0.108 4.108 9 C -0.120 4.120 10 C -0.101 4.101 11 C -0.371 4.371 12 Si 1.129 2.871 13 C -0.466 4.466 14 C -0.463 4.463 15 C -0.463 4.463 16 C -0.101 4.101 17 C -0.121 4.121 18 C -0.098 4.098 19 C -0.192 4.192 20 Br -0.011 7.011 21 C 0.054 3.946 22 C -0.068 4.068 23 O -0.539 6.539 24 Si 0.950 3.050 25 H -0.255 1.255 26 H -0.246 1.246 27 H -0.216 1.216 28 H 0.087 0.913 29 H 0.114 0.886 30 H 0.095 0.905 31 H 0.415 0.585 32 H 0.073 0.927 33 H 0.075 0.925 34 H 0.127 0.873 35 H 0.138 0.862 36 H 0.066 0.934 37 H 0.073 0.927 38 H 0.066 0.934 39 H 0.069 0.931 40 H 0.072 0.928 41 H 0.071 0.929 42 H 0.071 0.929 43 H 0.072 0.928 44 H 0.069 0.931 45 H 0.137 0.863 46 H 0.126 0.874 47 H 0.177 0.823 48 H 0.138 0.862 49 H 0.381 0.619 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.350 1.822 1.793 4.214 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.081 4.081 2 N -0.067 5.067 3 C -0.167 4.167 4 C 0.379 3.621 5 O -0.455 6.455 6 N -0.352 5.352 7 C 0.046 3.954 8 C -0.108 4.108 9 C -0.139 4.139 10 C -0.118 4.118 11 C -0.411 4.411 12 Si 1.316 2.684 13 C -0.572 4.572 14 C -0.570 4.570 15 C -0.570 4.570 16 C -0.119 4.119 17 C -0.140 4.140 18 C -0.125 4.125 19 C -0.277 4.277 20 Br 0.073 6.927 21 C -0.069 4.069 22 C -0.177 4.177 23 O -0.347 6.347 24 Si 0.767 3.233 25 H -0.179 1.179 26 H -0.169 1.169 27 H -0.138 1.138 28 H 0.105 0.895 29 H 0.133 0.867 30 H 0.114 0.886 31 H 0.252 0.748 32 H 0.091 0.909 33 H 0.093 0.907 34 H 0.145 0.855 35 H 0.155 0.845 36 H 0.085 0.915 37 H 0.092 0.908 38 H 0.085 0.915 39 H 0.088 0.912 40 H 0.092 0.908 41 H 0.091 0.909 42 H 0.090 0.910 43 H 0.092 0.908 44 H 0.088 0.912 45 H 0.155 0.845 46 H 0.144 0.856 47 H 0.194 0.806 48 H 0.155 0.845 49 H 0.231 0.769 Dipole moment (debyes) X Y Z Total from point charges 2.221 1.127 2.328 3.409 hybrid contribution 0.062 0.513 -0.483 0.707 sum 2.283 1.640 1.845 3.362 Atomic orbital electron populations 1.22524 0.74088 1.06217 1.05298 1.43949 1.07869 1.03835 1.51026 1.20063 0.90302 0.87678 1.18690 1.16956 0.85359 0.83696 0.76093 1.90819 1.17509 1.85130 1.52085 1.45622 1.10291 1.05608 1.73645 1.20182 0.94101 0.78367 1.02767 1.19764 0.97327 0.99524 0.94217 1.21359 0.97024 0.98587 0.96911 1.21378 0.95031 0.95821 0.99601 1.27940 1.11949 1.07152 0.94077 0.77122 0.62024 0.63322 0.65953 1.26328 1.06261 1.20145 1.04452 1.26285 1.09429 1.05661 1.15591 1.26292 1.10187 1.04781 1.15761 1.21369 0.95330 0.96587 0.98572 1.21351 0.96769 0.97780 0.98099 1.21458 0.95515 0.92922 1.02600 1.20854 0.91289 0.95091 1.20493 1.96642 1.36100 1.61952 1.98037 1.21106 0.89679 0.90471 1.05632 1.24915 1.03868 0.86747 1.02218 1.86533 1.26810 1.75340 1.45984 0.85626 0.84223 0.79981 0.73488 1.17908 1.16926 1.13765 0.89461 0.86723 0.88634 0.74839 0.90885 0.90667 0.85465 0.84461 0.91455 0.90832 0.91496 0.91151 0.90840 0.90946 0.90998 0.90842 0.91168 0.84542 0.85642 0.80579 0.84466 0.76858 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.02 10.10 127.77 1.29 1.27 16 2 N -0.39 -1.42 3.16 -519.63 -1.64 -3.06 16 3 C -0.05 -0.23 6.88 40.35 0.28 0.05 16 4 C 0.59 3.30 7.77 86.44 0.67 3.97 16 5 O -0.57 -6.64 14.88 -4.34 -0.06 -6.70 16 6 N -0.70 -0.31 5.53 -470.83 -2.61 -2.91 16 7 C 0.17 0.12 5.81 85.63 0.50 0.62 16 8 C -0.11 0.04 5.25 -19.86 -0.10 -0.06 16 9 C -0.12 0.11 9.70 22.27 0.22 0.33 16 10 C -0.10 0.21 9.29 22.27 0.21 0.42 16 11 C -0.37 1.11 4.59 22.27 0.10 1.21 16 12 Si 1.13 -8.01 12.32 68.60 0.85 -7.17 16 13 C -0.47 1.99 8.65 113.37 0.98 2.97 16 14 C -0.46 2.58 8.53 113.37 0.97 3.54 16 15 C -0.46 2.51 8.53 113.37 0.97 3.48 16 16 C -0.10 0.19 9.29 22.27 0.21 0.40 16 17 C -0.12 0.07 9.70 22.27 0.22 0.29 16 18 C -0.10 -0.15 10.34 22.58 0.23 0.09 16 19 C -0.19 -0.54 6.08 22.03 0.13 -0.40 16 20 Br -0.01 -0.01 28.79 -20.37 -0.59 -0.60 16 21 C 0.05 0.15 5.32 41.34 0.22 0.37 16 22 C -0.07 -0.02 2.79 71.23 0.20 0.18 16 23 O -0.54 -1.64 12.88 -148.98 -1.92 -3.56 16 24 Si 0.95 -0.39 26.85 68.60 1.84 1.46 16 25 H -0.26 -0.27 7.11 99.48 0.71 0.44 16 26 H -0.25 -0.24 7.11 99.48 0.71 0.47 16 27 H -0.22 0.06 5.54 99.48 0.55 0.61 16 28 H 0.09 -0.03 8.14 -2.39 -0.02 -0.05 16 29 H 0.11 -0.72 6.80 -2.39 -0.02 -0.73 16 30 H 0.10 0.20 6.76 -2.39 -0.02 0.18 16 31 H 0.41 -1.46 7.37 -92.71 -0.68 -2.14 16 32 H 0.07 0.17 8.08 -2.39 -0.02 0.15 16 33 H 0.08 0.12 8.08 -2.39 -0.02 0.10 16 34 H 0.13 -0.37 8.06 -2.91 -0.02 -0.39 16 35 H 0.14 -0.79 7.43 -2.91 -0.02 -0.81 16 36 H 0.07 -0.24 7.96 -2.39 -0.02 -0.26 16 37 H 0.07 -0.33 7.96 -2.39 -0.02 -0.35 16 38 H 0.07 -0.23 7.96 -2.39 -0.02 -0.25 16 39 H 0.07 -0.35 7.96 -2.39 -0.02 -0.37 16 40 H 0.07 -0.40 7.96 -2.38 -0.02 -0.42 16 41 H 0.07 -0.43 7.69 -2.39 -0.02 -0.44 16 42 H 0.07 -0.40 7.69 -2.39 -0.02 -0.42 16 43 H 0.07 -0.39 7.96 -2.39 -0.02 -0.41 16 44 H 0.07 -0.34 7.96 -2.39 -0.02 -0.36 16 45 H 0.14 -0.74 7.43 -2.91 -0.02 -0.76 16 46 H 0.13 -0.27 8.06 -2.91 -0.02 -0.30 16 47 H 0.18 -0.68 7.45 -2.91 -0.02 -0.70 16 48 H 0.14 -0.51 6.43 -2.39 -0.02 -0.53 16 49 H 0.38 0.14 6.18 -74.06 -0.46 -0.32 16 Total: 0.00 -15.50 420.18 3.59 -11.91 By element: Atomic # 1 Polarization: -8.52 SS G_CDS: 0.44 Total: -8.08 kcal Atomic # 6 Polarization: 11.43 SS G_CDS: 7.28 Total: 18.72 kcal Atomic # 7 Polarization: -1.72 SS G_CDS: -4.25 Total: -5.97 kcal Atomic # 8 Polarization: -8.28 SS G_CDS: -1.98 Total: -10.26 kcal Atomic # 14 Polarization: -8.40 SS G_CDS: 2.69 Total: -5.71 kcal Atomic # 35 Polarization: -0.01 SS G_CDS: -0.59 Total: -0.60 kcal Total: -15.50 3.59 -11.91 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10854838_5000100.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -18.899 kcal (2) G-P(sol) polarization free energy of solvation -15.503 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -34.402 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.588 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -11.915 kcal (6) G-S(sol) free energy of system = (1) + (5) -30.813 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds