Wall clock time and date at job start Sat Mar 6 2021 13:49:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 O 1.42898 * 109.47159 * 2 1 4 4 C 1.35898 * 117.00209 * 84.95344 * 3 2 1 5 5 C 1.38732 * 120.05848 * 174.27919 * 4 3 2 6 6 C 1.38136 * 119.94610 * 179.69623 * 5 4 3 7 7 C 1.38271 * 120.05597 * 0.59031 * 6 5 4 8 8 C 1.50700 * 119.94356 * 179.70379 * 7 6 5 9 9 O 1.42898 * 109.46926 * 119.98231 * 8 7 6 10 10 Si 1.86292 * 109.47399 * 359.97438 * 8 7 6 11 11 C 1.38263 * 120.10955 * 359.67860 * 7 6 5 12 12 C 1.38150 * 120.05585 * 0.02725 * 11 7 6 13 13 C 1.50703 * 109.47209 * 239.99572 * 2 1 3 14 14 O 1.21274 * 119.99839 * 114.99993 * 13 2 1 15 15 N 1.34777 * 119.99644 * 295.00084 * 13 2 1 16 16 C 1.46499 * 119.99500 * 180.02562 * 15 13 2 17 17 H 1.08998 * 112.85315 * 23.80307 * 16 15 13 18 18 C 1.53778 * 113.61784 * 155.00337 * 16 15 13 19 19 C 1.53784 * 87.08091 * 89.19694 * 18 16 15 20 20 H 1.08998 * 113.61794 * 270.79985 * 19 18 16 21 21 C 1.50701 * 113.61031 * 139.98394 * 19 18 16 22 22 C 1.38129 * 119.97144 * 120.00342 * 21 19 18 23 23 C 1.38751 * 119.94537 * 180.02562 * 22 21 19 24 24 O 1.35892 * 120.05798 * 179.97438 * 23 22 21 25 25 C 1.42897 * 117.00484 * 180.02562 * 24 23 22 26 26 F 1.39900 * 109.46796 * 60.00199 * 25 24 23 27 27 F 1.39894 * 109.47654 * 179.97438 * 25 24 23 28 28 F 1.39902 * 109.47098 * 300.00780 * 25 24 23 29 29 C 1.38719 * 119.88626 * 359.97438 * 23 22 21 30 30 C 1.38165 * 119.94713 * 0.25020 * 29 23 22 31 31 C 1.38245 * 120.05251 * 359.50012 * 30 29 23 32 32 C 1.53775 * 87.08121 * 25.43717 * 19 18 16 33 33 H 1.08996 * 109.47353 * 180.02562 * 1 2 3 34 34 H 1.09000 * 109.47036 * 300.00378 * 1 2 3 35 35 H 1.08998 * 109.47035 * 60.00541 * 1 2 3 36 36 H 1.09008 * 109.46647 * 120.00099 * 2 1 3 37 37 H 1.08004 * 120.02224 * 359.97438 * 5 4 3 38 38 H 1.08002 * 119.97772 * 180.26807 * 6 5 4 39 39 H 1.09006 * 109.46515 * 239.97602 * 8 7 6 40 40 H 0.96706 * 113.99904 * 299.99087 * 9 8 7 41 41 H 1.48501 * 109.99972 * 58.68155 * 10 8 7 42 42 H 1.48502 * 110.00022 * 179.97438 * 10 8 7 43 43 H 1.08003 * 119.97149 * 180.02562 * 11 7 6 44 44 H 1.07997 * 120.02588 * 179.97438 * 12 11 7 45 45 H 0.96991 * 120.00362 * 0.02562 * 15 13 2 46 46 H 1.09004 * 113.60866 * 334.65154 * 18 16 15 47 47 H 1.09000 * 113.61823 * 203.74975 * 18 16 15 48 48 H 1.07996 * 120.02713 * 0.04024 * 22 21 19 49 49 H 1.08000 * 120.02342 * 179.97438 * 29 23 22 50 50 H 1.07992 * 119.97637 * 179.74627 * 30 29 23 51 51 H 1.07996 * 119.94574 * 180.25597 * 31 30 29 52 52 H 1.09003 * 113.61890 * 89.11145 * 32 19 18 53 53 H 1.09001 * 113.61378 * 220.01807 * 32 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3473 0.0000 4 6 2.1116 1.9645 1.2061 5 6 2.6776 3.2281 1.2931 6 6 2.7778 3.8559 2.5194 7 6 2.3255 3.2211 3.6614 8 6 2.4421 3.9056 4.9989 9 8 1.1406 4.0660 5.5669 10 14 3.2320 5.5777 4.7740 11 6 1.7660 1.9594 3.5783 12 6 1.6581 1.3297 2.3534 13 6 2.0324 -0.7105 -1.2304 14 8 2.6530 -0.0981 -2.0733 15 7 1.7919 -2.0265 -1.3940 16 6 2.2807 -2.7173 -2.5898 17 1 3.1346 -2.2181 -3.0477 18 6 2.4858 -4.2279 -2.3881 19 6 1.0211 -4.4050 -2.8220 20 1 0.3118 -4.3542 -1.9959 21 6 0.7960 -5.5986 -3.7140 22 6 -0.0656 -6.6031 -3.3183 23 6 -0.2721 -7.7020 -4.1398 24 8 -1.1188 -8.6918 -3.7525 25 6 -1.2825 -9.7931 -4.6482 26 9 -0.0463 -10.4150 -4.8535 27 9 -2.1809 -10.7131 -4.0971 28 9 -1.7801 -9.3297 -5.8709 29 6 0.3873 -7.7886 -5.3572 30 6 1.2516 -6.7834 -5.7464 31 6 1.4517 -5.6871 -4.9284 32 6 1.1709 -3.0814 -3.5902 33 1 -0.3634 -1.0276 0.0005 34 1 -0.3633 0.5139 0.8900 35 1 -0.3633 0.5137 -0.8900 36 1 1.8933 -0.5139 0.8901 37 1 3.0356 3.7223 0.4020 38 1 3.2144 4.8414 2.5871 39 1 3.0569 3.2999 5.6647 40 1 0.5383 4.5959 5.0268 41 1 2.4201 6.4020 3.8431 42 1 3.3521 6.2633 6.0858 43 1 1.4131 1.4657 4.4717 44 1 1.2214 0.3441 2.2890 45 1 1.2952 -2.5162 -0.7200 46 1 2.6711 -4.5087 -1.3513 47 1 3.2029 -4.6677 -3.0813 48 1 -0.5783 -6.5331 -2.3703 49 1 0.2285 -8.6432 -5.9982 50 1 1.7683 -6.8523 -6.6922 51 1 2.1245 -4.9004 -5.2362 52 1 1.5284 -3.2076 -4.6121 53 1 0.2946 -2.4365 -3.5239 There are 80 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 80 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10860230_10157680.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:49:39 Heat of formation + Delta-G solvation = -203.668283 kcal Electronic energy + Delta-G solvation = -41302.294478 eV Core-core repulsion = 35271.564217 eV Total energy + Delta-G solvation = -6030.730261 eV No. of doubly occupied orbitals = 80 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 438.153 amu Computer time = 1.64 seconds Orbital eigenvalues (eV) -51.54276 -49.26171 -49.14044 -41.97357 -41.54199 -40.90483 -39.94418 -39.02255 -38.12081 -37.25391 -34.87119 -33.15974 -32.16211 -32.02090 -31.44380 -31.01876 -27.28177 -26.80201 -26.66902 -26.33843 -25.24396 -24.14957 -23.88705 -23.04244 -22.50630 -21.50172 -21.02343 -20.26012 -20.12861 -19.73019 -19.42200 -18.64709 -18.26553 -17.92016 -17.29884 -17.12038 -16.83546 -16.71123 -16.38468 -16.35113 -16.29369 -16.15846 -15.91345 -15.85909 -15.69918 -15.61895 -15.55050 -15.49738 -15.30679 -15.24984 -15.24297 -14.85931 -14.73293 -14.46191 -14.30635 -14.27039 -14.19235 -13.94319 -13.61603 -13.44732 -13.36851 -13.32882 -12.92619 -12.87317 -12.81341 -12.68922 -12.26203 -12.19628 -11.99714 -11.81571 -11.70016 -11.59425 -11.28949 -10.93204 -10.59177 -10.16334 -10.03067 -9.91569 -9.57388 -9.21576 -4.91028 0.10338 0.23254 0.25405 0.33592 0.37996 1.33761 1.40007 1.48478 1.60839 1.74093 1.96429 2.48764 2.50011 2.65664 2.67469 2.89701 3.43201 3.44649 3.45197 3.58914 3.61572 3.66442 3.70226 3.73290 3.83663 3.87140 3.89487 3.93632 3.95088 4.06297 4.19864 4.27962 4.29108 4.36529 4.42351 4.56178 4.59200 4.62622 4.66697 4.71034 4.80143 4.85267 4.88580 4.97053 5.00458 5.00875 5.05137 5.09313 5.14707 5.19922 5.26729 5.29954 5.36272 5.46000 5.48969 5.62781 5.69293 5.89133 6.26740 6.45466 6.50512 7.10219 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.172 4.172 2 C 0.064 3.936 3 O -0.312 6.312 4 C 0.120 3.880 5 C -0.160 4.160 6 C -0.077 4.077 7 C -0.158 4.158 8 C -0.072 4.072 9 O -0.548 6.548 10 Si 0.755 3.245 11 C -0.056 4.056 12 C -0.207 4.207 13 C 0.520 3.480 14 O -0.567 6.567 15 N -0.690 5.690 16 C 0.114 3.886 17 H 0.086 0.914 18 C -0.123 4.123 19 C -0.066 4.066 20 H 0.120 0.880 21 C -0.034 4.034 22 C -0.126 4.126 23 C 0.084 3.916 24 O -0.319 6.319 25 C 0.608 3.392 26 F -0.166 7.166 27 F -0.133 7.133 28 F -0.166 7.166 29 C -0.208 4.208 30 C -0.080 4.080 31 C -0.134 4.134 32 C -0.142 4.142 33 H 0.110 0.890 34 H 0.083 0.917 35 H 0.058 0.942 36 H 0.127 0.873 37 H 0.134 0.866 38 H 0.147 0.853 39 H 0.127 0.873 40 H 0.385 0.615 41 H -0.286 1.286 42 H -0.304 1.304 43 H 0.140 0.860 44 H 0.155 0.845 45 H 0.420 0.580 46 H 0.092 0.908 47 H 0.104 0.896 48 H 0.150 0.850 49 H 0.130 0.870 50 H 0.150 0.850 51 H 0.150 0.850 52 H 0.100 0.900 53 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.659 -2.668 1.748 3.257 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.230 4.230 2 C 0.005 3.995 3 O -0.225 6.225 4 C 0.075 3.925 5 C -0.179 4.179 6 C -0.094 4.094 7 C -0.159 4.159 8 C -0.181 4.181 9 O -0.356 6.356 10 Si 0.661 3.339 11 C -0.074 4.074 12 C -0.226 4.226 13 C 0.306 3.694 14 O -0.445 6.445 15 N -0.344 5.344 16 C 0.009 3.991 17 H 0.104 0.896 18 C -0.160 4.160 19 C -0.084 4.084 20 H 0.138 0.862 21 C -0.034 4.034 22 C -0.145 4.145 23 C 0.042 3.958 24 O -0.239 6.239 25 C 0.517 3.483 26 F -0.148 7.148 27 F -0.114 7.114 28 F -0.148 7.148 29 C -0.227 4.227 30 C -0.098 4.098 31 C -0.152 4.152 32 C -0.180 4.180 33 H 0.129 0.871 34 H 0.102 0.898 35 H 0.078 0.922 36 H 0.145 0.855 37 H 0.152 0.848 38 H 0.164 0.836 39 H 0.144 0.856 40 H 0.235 0.765 41 H -0.212 1.212 42 H -0.232 1.232 43 H 0.158 0.842 44 H 0.173 0.827 45 H 0.258 0.742 46 H 0.111 0.889 47 H 0.122 0.878 48 H 0.168 0.832 49 H 0.148 0.852 50 H 0.168 0.832 51 H 0.167 0.833 52 H 0.119 0.881 53 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges 1.207 -1.720 1.642 2.667 hybrid contribution -1.680 -0.680 -0.242 1.828 sum -0.472 -2.400 1.400 2.818 Atomic orbital electron populations 1.22363 0.90659 1.05725 1.04235 1.22414 0.97040 0.82191 0.97870 1.86189 1.81442 1.27021 1.27890 1.19261 0.95817 0.93133 0.84260 1.20583 1.03927 0.94150 0.99214 1.20968 0.97726 0.99704 0.91018 1.20265 1.03722 0.96611 0.95300 1.25050 0.88755 1.10339 0.94004 1.86562 1.23257 1.75126 1.50672 0.94175 0.88515 0.73601 0.77560 1.20992 0.95305 0.93632 0.97515 1.21527 1.06534 1.02654 0.91847 1.20487 0.78891 0.82780 0.87272 1.90754 1.41417 1.66869 1.45412 1.45380 1.57295 1.07871 1.23860 1.21879 0.97594 0.93410 0.86251 0.89599 1.23395 0.95841 0.92730 1.04069 1.21672 0.98556 0.90510 0.97652 0.86246 1.19689 0.94163 0.94605 0.94950 1.20533 1.01580 0.91582 1.00767 1.18974 0.92560 0.88500 0.95780 1.86395 1.63379 1.29587 1.44559 1.19268 0.74956 0.78557 0.75489 1.93305 1.43519 1.83412 1.94524 1.93317 1.67524 1.64526 1.86043 1.93305 1.87827 1.88517 1.45159 1.21682 1.01848 1.02961 0.96202 1.21237 0.95790 0.92331 1.00467 1.21378 1.00884 0.98831 0.94071 1.23580 0.99232 0.95847 0.99345 0.87137 0.89796 0.92245 0.85527 0.84761 0.83575 0.85551 0.76539 1.21225 1.23189 0.84245 0.82744 0.74190 0.88917 0.87764 0.83189 0.85198 0.83231 0.83267 0.88133 0.91026 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 1.21 9.13 71.98 0.66 1.87 16 2 C 0.06 -0.16 2.63 29.85 0.08 -0.09 16 3 O -0.31 -1.68 9.34 -73.42 -0.69 -2.37 16 4 C 0.12 0.34 6.60 22.51 0.15 0.49 16 5 C -0.16 -0.44 9.99 22.36 0.22 -0.22 16 6 C -0.08 0.02 8.66 22.25 0.19 0.21 16 7 C -0.16 0.11 5.39 -19.85 -0.11 0.00 16 8 C -0.07 0.11 2.82 71.24 0.20 0.31 16 9 O -0.55 -0.78 12.77 -148.98 -1.90 -2.68 16 10 Si 0.76 -1.33 29.78 68.60 2.04 0.71 16 11 C -0.06 0.07 9.60 22.25 0.21 0.29 16 12 C -0.21 0.36 8.24 22.37 0.18 0.55 16 13 C 0.52 0.80 7.18 87.66 0.63 1.43 16 14 O -0.57 -7.27 16.11 15.98 0.26 -7.01 16 15 N -0.69 4.46 5.23 -440.04 -2.30 2.16 16 16 C 0.11 -0.61 4.32 45.52 0.20 -0.41 16 17 H 0.09 0.00 7.46 -2.39 -0.02 -0.02 16 18 C -0.12 1.16 7.29 31.12 0.23 1.39 16 19 C -0.07 0.60 3.86 -11.01 -0.04 0.56 16 20 H 0.12 -1.47 8.09 -2.39 -0.02 -1.49 16 21 C -0.03 0.17 5.29 -19.88 -0.11 0.06 16 22 C -0.13 0.26 9.65 22.37 0.22 0.48 16 23 C 0.08 0.15 6.48 22.51 0.15 0.29 16 24 O -0.32 -1.04 10.37 -92.33 -0.96 -1.99 16 25 C 0.61 1.43 3.42 113.37 0.39 1.82 16 26 F -0.17 -0.41 15.56 44.97 0.70 0.29 16 27 F -0.13 -0.37 17.53 44.97 0.79 0.42 16 28 F -0.17 -0.44 15.56 44.97 0.70 0.26 16 29 C -0.21 -0.17 8.26 22.37 0.18 0.02 16 30 C -0.08 0.21 10.04 22.25 0.22 0.43 16 31 C -0.13 0.62 8.61 22.28 0.19 0.81 16 32 C -0.14 0.93 7.25 31.12 0.23 1.15 16 33 H 0.11 -1.49 7.92 -2.39 -0.02 -1.51 16 34 H 0.08 -0.63 6.91 -2.39 -0.02 -0.64 16 35 H 0.06 -0.16 8.14 -2.39 -0.02 -0.18 16 36 H 0.13 -1.07 6.31 -2.38 -0.02 -1.09 16 37 H 0.13 0.31 8.06 -2.91 -0.02 0.29 16 38 H 0.15 -0.57 4.87 -2.91 -0.01 -0.59 16 39 H 0.13 -0.42 7.96 -2.38 -0.02 -0.44 16 40 H 0.39 -1.43 8.70 -74.05 -0.64 -2.07 16 41 H -0.29 -0.70 7.11 99.48 0.71 0.01 16 42 H -0.30 -1.84 7.11 99.48 0.71 -1.13 16 43 H 0.14 -0.49 8.06 -2.91 -0.02 -0.51 16 44 H 0.16 -1.16 5.43 -2.91 -0.02 -1.18 16 45 H 0.42 -5.77 8.49 -92.72 -0.79 -6.55 16 46 H 0.09 -1.05 8.14 -2.38 -0.02 -1.07 16 47 H 0.10 -0.97 7.72 -2.39 -0.02 -0.99 16 48 H 0.15 -0.82 8.05 -2.91 -0.02 -0.84 16 49 H 0.13 0.08 5.10 -2.91 -0.01 0.06 16 50 H 0.15 -0.96 8.06 -2.91 -0.02 -0.99 16 51 H 0.15 -1.26 6.65 -2.91 -0.02 -1.27 16 52 H 0.10 -0.69 6.31 -2.39 -0.02 -0.70 16 53 H 0.07 -0.34 8.14 -2.39 -0.02 -0.36 16 Total: 0.00 -24.59 445.77 2.54 -22.04 By element: Atomic # 1 Polarization: -22.90 SS G_CDS: -0.37 Total: -23.27 kcal Atomic # 6 Polarization: 7.16 SS G_CDS: 4.27 Total: 11.43 kcal Atomic # 7 Polarization: 4.46 SS G_CDS: -2.30 Total: 2.16 kcal Atomic # 8 Polarization: -10.77 SS G_CDS: -3.29 Total: -14.05 kcal Atomic # 9 Polarization: -1.21 SS G_CDS: 2.19 Total: 0.97 kcal Atomic # 14 Polarization: -1.33 SS G_CDS: 2.04 Total: 0.71 kcal Total: -24.59 2.54 -22.04 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10860230_10157680.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -181.624 kcal (2) G-P(sol) polarization free energy of solvation -24.587 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -206.211 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.542 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.045 kcal (6) G-S(sol) free energy of system = (1) + (5) -203.668 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.64 seconds