Wall clock time and date at job start Sat Mar 6 2021 13:49:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86304 * 109.47049 * 2 1 4 4 C 1.50699 * 109.47081 * 119.99700 * 2 1 3 5 5 C 1.35459 * 126.06978 * 245.03953 * 4 2 1 6 6 N 1.35533 * 108.87324 * 179.69755 * 5 4 2 7 7 C 1.37649 * 108.64153 * 0.44040 * 6 5 4 8 8 C 1.46678 * 126.23249 * 179.83237 * 7 6 5 9 9 O 1.21691 * 120.00131 * 179.68819 * 8 7 6 10 10 N 1.34776 * 119.99834 * 359.69058 * 8 7 6 11 11 C 1.46503 * 119.99784 * 180.02562 * 10 8 7 12 12 H 1.08997 * 112.85279 * 23.80346 * 11 10 8 13 13 C 1.53787 * 113.61181 * 154.99519 * 11 10 8 14 14 C 1.53784 * 87.07923 * 89.11654 * 13 11 10 15 15 H 1.09000 * 113.61578 * 270.88484 * 14 13 11 16 16 C 1.50701 * 113.61605 * 139.97671 * 14 13 11 17 17 C 1.38240 * 119.97228 * 299.72952 * 16 14 13 18 18 C 1.38291 * 120.10800 * 179.76428 * 17 16 14 19 19 C 1.38120 * 120.05664 * 0.50457 * 18 17 16 20 20 C 1.38751 * 119.94369 * 359.74752 * 19 18 17 21 21 O 1.35900 * 120.05748 * 179.97438 * 20 19 18 22 22 C 1.42905 * 116.99540 * 0.02562 * 21 20 19 23 23 F 1.39897 * 109.47161 * 60.00479 * 22 21 20 24 24 F 1.39906 * 109.46769 * 179.97438 * 22 21 20 25 25 F 1.39894 * 109.47422 * 299.99829 * 22 21 20 26 26 C 1.38171 * 119.96983 * 119.99491 * 16 14 13 27 27 C 1.53778 * 113.61472 * 252.49040 * 11 10 8 28 28 C 1.37869 * 107.53668 * 359.56800 * 7 6 5 29 29 H 0.96704 * 114.00019 * 299.99986 * 1 2 3 30 30 H 1.09003 * 109.47464 * 240.00124 * 2 1 3 31 31 H 1.48505 * 110.00109 * 178.68197 * 3 2 1 32 32 H 1.48500 * 109.99843 * 299.99732 * 3 2 1 33 33 H 1.08006 * 125.55862 * 0.02562 * 5 4 2 34 34 H 0.97002 * 125.67697 * 180.31040 * 6 5 4 35 35 H 0.96997 * 120.00437 * 359.97438 * 10 8 7 36 36 H 1.09004 * 113.61202 * 203.66406 * 13 11 10 37 37 H 1.08994 * 113.61447 * 334.56838 * 13 11 10 38 38 H 1.07992 * 119.94563 * 359.97438 * 17 16 14 39 39 H 1.08006 * 119.96924 * 180.27220 * 18 17 16 40 40 H 1.07998 * 120.02892 * 179.72283 * 19 18 17 41 41 H 1.07996 * 120.02718 * 359.96294 * 26 16 14 42 42 H 1.08999 * 113.61111 * 25.43782 * 27 11 10 43 43 H 1.09004 * 113.61682 * 156.33179 * 27 11 10 44 44 H 1.08000 * 126.46031 * 180.23476 * 28 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 1.2305 5 6 2.6327 -0.1496 2.2446 6 7 2.8991 -1.1012 3.1722 7 6 2.3680 -2.2960 2.7418 8 6 2.4359 -3.5795 3.4485 9 8 1.9193 -4.5690 2.9639 10 7 3.0703 -3.6629 4.6347 11 6 3.1386 -4.9451 5.3402 12 1 3.0301 -5.8011 4.6742 13 6 4.3363 -5.0580 6.2982 14 6 3.4277 -4.4504 7.3800 15 1 3.4559 -3.3612 7.4127 16 6 3.5989 -5.0826 8.7372 17 6 3.3511 -6.4320 8.9067 18 6 3.5121 -7.0161 10.1499 19 6 3.9110 -6.2500 11.2277 20 6 4.1553 -4.8944 11.0613 21 8 4.5474 -4.1384 12.1203 22 6 4.6886 -4.8051 13.3764 23 9 5.6474 -5.8174 13.2618 24 9 5.0960 -3.8857 14.3491 25 9 3.4615 -5.3647 13.7479 26 6 3.9983 -4.3119 9.8122 27 6 2.2375 -5.0122 6.5846 28 6 1.7554 -2.0652 1.5284 29 1 -0.3933 0.4417 0.7651 30 1 1.7924 -0.5138 -0.8900 31 1 3.5346 1.7704 0.0321 32 1 1.5615 2.4679 -1.2085 33 1 2.9267 0.8878 2.3066 34 1 3.3849 -0.9636 4.0004 35 1 3.4824 -2.8743 5.0209 36 1 4.6344 -6.0858 6.5052 37 1 5.1761 -4.4195 6.0243 38 1 3.0345 -7.0317 8.0663 39 1 3.3220 -8.0715 10.2788 40 1 4.0322 -6.7057 12.1993 41 1 4.1882 -3.2571 9.6801 42 1 1.3831 -4.3367 6.5418 43 1 1.9618 -6.0274 6.8698 44 1 1.2377 -2.7937 0.9220 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10860230_10543058.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:49:45 Heat of formation + Delta-G solvation = -155.683372 kcal Electronic energy + Delta-G solvation = -33736.697655 eV Core-core repulsion = 28400.605835 eV Total energy + Delta-G solvation = -5336.091820 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 383.118 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -51.55008 -49.26720 -49.14954 -42.49878 -41.68840 -40.86633 -39.60987 -38.15597 -37.62329 -34.72585 -32.60338 -32.16596 -31.31366 -30.55498 -27.30450 -26.83647 -26.68403 -25.98739 -24.28542 -23.86108 -22.94012 -21.29954 -21.08737 -20.78651 -20.26760 -20.16853 -19.91868 -19.65119 -18.01684 -17.48433 -17.28062 -17.12803 -16.76794 -16.46377 -16.38365 -16.35397 -15.98507 -15.91319 -15.72787 -15.62038 -15.59722 -15.55312 -15.27930 -15.26295 -15.16258 -14.80950 -14.62678 -14.49653 -14.34542 -14.19053 -13.92806 -13.89697 -13.50143 -13.46626 -12.94799 -12.82448 -12.71055 -12.25907 -11.96463 -11.85799 -11.73408 -11.35641 -11.30161 -10.32146 -10.25802 -9.94289 -9.93109 -9.58997 -9.27542 -4.92497 0.08950 0.21879 0.36216 0.37006 1.42894 1.53619 1.73242 1.74804 1.91045 2.10653 2.15008 2.24821 2.48604 2.66500 2.88821 3.40803 3.56611 3.60168 3.65931 3.70413 3.80109 3.87569 3.91991 4.00004 4.04567 4.18428 4.19200 4.26327 4.37917 4.40567 4.61606 4.67239 4.77148 4.81154 4.85774 4.91804 4.93815 4.99163 5.02414 5.04442 5.11213 5.25166 5.34815 5.43002 5.58596 5.61354 5.74103 5.87727 6.35681 6.53887 6.92128 7.06078 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.566 6.566 2 C -0.053 4.053 3 Si 0.803 3.197 4 C -0.229 4.229 5 C 0.062 3.938 6 N -0.514 5.514 7 C -0.069 4.069 8 C 0.591 3.409 9 O -0.575 6.575 10 N -0.697 5.697 11 C 0.113 3.887 12 H 0.088 0.912 13 C -0.123 4.123 14 C -0.064 4.064 15 H 0.118 0.882 16 C -0.035 4.035 17 C -0.134 4.134 18 C -0.080 4.080 19 C -0.208 4.208 20 C 0.084 3.916 21 O -0.319 6.319 22 C 0.608 3.392 23 F -0.166 7.166 24 F -0.133 7.133 25 F -0.166 7.166 26 C -0.126 4.126 27 C -0.141 4.141 28 C -0.106 4.106 29 H 0.393 0.607 30 H 0.090 0.910 31 H -0.274 1.274 32 H -0.311 1.311 33 H 0.218 0.782 34 H 0.438 0.562 35 H 0.412 0.588 36 H 0.105 0.895 37 H 0.091 0.909 38 H 0.150 0.850 39 H 0.150 0.850 40 H 0.131 0.869 41 H 0.151 0.849 42 H 0.070 0.930 43 H 0.102 0.898 44 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.988 5.044 4.064 7.133 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.374 6.374 2 C -0.162 4.162 3 Si 0.708 3.292 4 C -0.236 4.236 5 C -0.076 4.076 6 N -0.111 5.111 7 C -0.182 4.182 8 C 0.380 3.620 9 O -0.454 6.454 10 N -0.348 5.348 11 C 0.008 3.992 12 H 0.106 0.894 13 C -0.160 4.160 14 C -0.083 4.083 15 H 0.136 0.864 16 C -0.035 4.035 17 C -0.152 4.152 18 C -0.098 4.098 19 C -0.226 4.226 20 C 0.042 3.958 21 O -0.239 6.239 22 C 0.517 3.483 23 F -0.148 7.148 24 F -0.114 7.114 25 F -0.148 7.148 26 C -0.144 4.144 27 C -0.180 4.180 28 C -0.133 4.133 29 H 0.243 0.757 30 H 0.108 0.892 31 H -0.201 1.201 32 H -0.240 1.240 33 H 0.234 0.766 34 H 0.279 0.721 35 H 0.249 0.751 36 H 0.123 0.877 37 H 0.109 0.891 38 H 0.167 0.833 39 H 0.168 0.832 40 H 0.148 0.852 41 H 0.169 0.831 42 H 0.088 0.912 43 H 0.120 0.880 44 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges 3.332 4.732 3.010 6.523 hybrid contribution 0.279 -0.807 0.623 1.057 sum 3.611 3.924 3.633 6.452 Atomic orbital electron populations 1.86459 1.18249 1.82392 1.50310 1.24736 0.84486 1.11208 0.95761 0.93956 0.77217 0.73133 0.84922 1.19953 1.09061 0.94398 1.00164 1.22394 1.00423 0.95929 0.88859 1.41847 1.43134 1.06332 1.19829 1.20084 1.11923 0.86759 0.99473 1.17230 0.77655 0.86475 0.80623 1.90853 1.48496 1.37914 1.68163 1.45362 1.56590 1.12603 1.20208 1.21904 0.98090 0.86305 0.92945 0.89426 1.23400 0.96233 1.03557 0.92858 1.21649 0.97011 1.00850 0.88752 0.86368 1.19668 0.96049 0.93402 0.94348 1.21378 1.00853 0.94875 0.98074 1.21244 0.95921 1.00957 0.91664 1.21682 1.06410 0.92566 1.01977 1.18963 1.00224 0.90444 0.86142 1.86399 1.83836 1.38089 1.15575 1.19276 0.74791 0.74650 0.79589 1.93305 1.64855 1.60953 1.95646 1.93321 1.90327 1.67147 1.60593 1.93304 1.44470 1.85243 1.91770 1.20526 1.03660 1.01853 0.88407 1.23582 0.96937 1.03046 0.94408 1.21227 1.00368 0.96637 0.95075 0.75686 0.89237 1.20077 1.23972 0.76602 0.72059 0.75069 0.87656 0.89086 0.83286 0.83181 0.85167 0.83136 0.91166 0.87972 0.86034 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 -1.39 12.88 -148.98 -1.92 -3.31 16 2 C -0.05 -0.01 3.02 71.24 0.22 0.21 16 3 Si 0.80 -4.04 30.60 68.60 2.10 -1.94 16 4 C -0.23 0.07 5.43 -20.12 -0.11 -0.04 16 5 C 0.06 -0.48 10.45 83.48 0.87 0.39 16 6 N -0.51 4.23 5.99 -183.62 -1.10 3.13 16 7 C -0.07 -0.09 7.06 40.35 0.28 0.20 16 8 C 0.59 2.41 7.79 86.45 0.67 3.09 16 9 O -0.58 -8.18 16.48 -4.32 -0.07 -8.25 16 10 N -0.70 3.30 5.26 -443.99 -2.33 0.97 16 11 C 0.11 -0.49 4.32 45.52 0.20 -0.29 16 12 H 0.09 0.08 7.46 -2.39 -0.02 0.06 16 13 C -0.12 1.09 7.29 31.12 0.23 1.32 16 14 C -0.06 0.56 3.86 -11.01 -0.04 0.52 16 15 H 0.12 -1.43 8.09 -2.39 -0.02 -1.45 16 16 C -0.03 0.16 5.29 -19.88 -0.11 0.06 16 17 C -0.13 0.61 8.62 22.28 0.19 0.80 16 18 C -0.08 0.21 10.04 22.25 0.22 0.43 16 19 C -0.21 -0.15 8.26 22.36 0.18 0.04 16 20 C 0.08 0.14 6.48 22.50 0.15 0.28 16 21 O -0.32 -0.97 10.37 -92.42 -0.96 -1.92 16 22 C 0.61 1.33 3.42 113.37 0.39 1.72 16 23 F -0.17 -0.39 15.56 44.97 0.70 0.31 16 24 F -0.13 -0.34 17.53 44.97 0.79 0.45 16 25 F -0.17 -0.41 15.56 44.97 0.70 0.29 16 26 C -0.13 0.28 9.65 22.37 0.22 0.50 16 27 C -0.14 0.83 7.25 31.12 0.23 1.05 16 28 C -0.11 -0.60 10.59 22.57 0.24 -0.36 16 29 H 0.39 -2.55 8.70 -74.05 -0.64 -3.20 16 30 H 0.09 0.31 7.96 -2.39 -0.02 0.29 16 31 H -0.27 0.56 7.11 99.48 0.71 1.27 16 32 H -0.31 -1.33 7.11 99.48 0.71 -0.62 16 33 H 0.22 -3.50 6.21 -2.91 -0.02 -3.52 16 34 H 0.44 -7.17 8.19 -92.71 -0.76 -7.93 16 35 H 0.41 -5.04 7.83 -92.71 -0.73 -5.77 16 36 H 0.11 -0.94 7.73 -2.39 -0.02 -0.95 16 37 H 0.09 -0.97 8.14 -2.39 -0.02 -0.99 16 38 H 0.15 -1.22 6.63 -2.91 -0.02 -1.24 16 39 H 0.15 -0.97 8.06 -2.91 -0.02 -0.99 16 40 H 0.13 0.06 5.10 -2.91 -0.01 0.05 16 41 H 0.15 -0.86 8.05 -2.91 -0.02 -0.89 16 42 H 0.07 -0.27 8.14 -2.39 -0.02 -0.29 16 43 H 0.10 -0.65 6.29 -2.38 -0.02 -0.67 16 44 H 0.12 1.26 8.06 -2.91 -0.02 1.23 16 Total: 0.00 -26.95 383.93 0.96 -25.98 By element: Atomic # 1 Polarization: -24.65 SS G_CDS: -0.97 Total: -25.61 kcal Atomic # 6 Polarization: 5.89 SS G_CDS: 4.03 Total: 9.91 kcal Atomic # 7 Polarization: 7.53 SS G_CDS: -3.44 Total: 4.09 kcal Atomic # 8 Polarization: -10.54 SS G_CDS: -2.95 Total: -13.49 kcal Atomic # 9 Polarization: -1.14 SS G_CDS: 2.19 Total: 1.05 kcal Atomic # 14 Polarization: -4.04 SS G_CDS: 2.10 Total: -1.94 kcal Total: -26.95 0.96 -25.98 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10860230_10543058.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -129.699 kcal (2) G-P(sol) polarization free energy of solvation -26.948 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -156.647 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.964 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.984 kcal (6) G-S(sol) free energy of system = (1) + (5) -155.683 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds