Wall clock time and date at job start Sat Mar 6 2021 13:50:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.35455 * 125.56508 * 2 1 4 4 C 1.50700 * 126.06309 * 0.26090 * 3 2 1 5 5 O 1.42895 * 109.47241 * 247.60694 * 4 3 2 6 6 Si 1.86302 * 109.47043 * 127.60693 * 4 3 2 7 7 C 1.39833 * 107.86601 * 179.97438 * 3 2 1 8 8 C 1.50699 * 126.45561 * 179.97438 * 7 3 2 9 9 C 1.37872 * 107.08489 * 0.02562 * 7 3 2 10 10 C 1.46685 * 126.23268 * 179.97438 * 9 7 3 11 11 O 1.21692 * 119.99567 * 359.97438 * 10 9 7 12 12 N 1.34773 * 120.00007 * 179.97438 * 10 9 7 13 13 C 1.46496 * 119.99949 * 179.97438 * 12 10 9 14 14 H 1.09003 * 112.85194 * 336.20248 * 13 12 10 15 15 C 1.53782 * 113.61217 * 107.50492 * 13 12 10 16 16 C 1.53776 * 87.08101 * 89.11658 * 15 13 12 17 17 H 1.09001 * 113.61570 * 270.88457 * 16 15 13 18 18 C 1.50704 * 113.61557 * 139.98249 * 16 15 13 19 19 C 1.38116 * 119.97437 * 142.50189 * 18 16 15 20 20 C 1.38762 * 119.94319 * 179.97438 * 19 18 16 21 21 O 1.35901 * 120.05254 * 179.97438 * 20 19 18 22 22 C 1.42901 * 116.99898 * 180.02562 * 21 20 19 23 23 F 1.39897 * 109.47147 * 59.99707 * 22 21 20 24 24 F 1.39897 * 109.47035 * 179.97438 * 22 21 20 25 25 F 1.39903 * 109.46738 * 300.00070 * 22 21 20 26 26 C 1.38710 * 119.88931 * 0.02562 * 20 19 18 27 27 C 1.38167 * 119.94084 * 0.02562 * 26 20 19 28 28 C 1.38239 * 120.06024 * 359.74209 * 27 26 20 29 29 C 1.53777 * 113.61525 * 205.00036 * 13 12 10 30 30 N 1.35536 * 125.56435 * 179.97438 * 2 1 3 31 31 H 1.08997 * 109.46875 * 84.55084 * 1 2 3 32 32 H 1.09000 * 109.46964 * 204.54592 * 1 2 3 33 33 H 1.08992 * 109.46977 * 324.55164 * 1 2 3 34 34 H 1.09003 * 109.47302 * 7.61215 * 4 3 2 35 35 H 0.96702 * 114.00070 * 300.00422 * 5 4 3 36 36 H 1.48497 * 110.00298 * 175.66176 * 6 4 3 37 37 H 1.48509 * 110.00011 * 296.98490 * 6 4 3 38 38 H 1.08994 * 109.47255 * 90.00113 * 8 7 3 39 39 H 1.09005 * 109.47075 * 210.00126 * 8 7 3 40 40 H 1.09002 * 109.47368 * 329.99854 * 8 7 3 41 41 H 0.97003 * 119.99762 * 0.02562 * 12 10 9 42 42 H 1.09004 * 113.61327 * 203.66404 * 15 13 12 43 43 H 1.08998 * 113.61869 * 334.56803 * 15 13 12 44 44 H 1.07998 * 120.03110 * 0.02562 * 19 18 16 45 45 H 1.08000 * 120.02623 * 180.02562 * 26 20 19 46 46 H 1.08003 * 119.96781 * 179.97438 * 27 26 20 47 47 H 1.07999 * 119.94703 * 180.25282 * 28 27 26 48 48 H 1.08999 * 113.61300 * 25.43851 * 29 13 12 49 49 H 1.09006 * 113.61185 * 156.33767 * 29 13 12 50 50 H 0.97003 * 125.67765 * 0.02562 * 30 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2949 1.1019 0.0000 4 6 1.8199 2.5320 0.0055 5 8 2.1522 3.1492 -1.2397 6 14 2.6466 3.4555 1.3965 7 6 3.6270 0.6768 0.0006 8 6 4.8486 1.5592 0.0003 9 6 3.6122 -0.7019 0.0004 10 6 4.7861 -1.5815 0.0003 11 8 5.9049 -1.1030 -0.0001 12 7 4.6254 -2.9196 0.0006 13 6 5.7977 -3.7981 -0.0001 14 1 6.6873 -3.3166 -0.4061 15 6 6.0374 -4.5065 1.3437 16 6 5.1276 -5.6317 0.8231 17 1 4.0721 -5.4794 1.0486 18 6 5.6106 -7.0134 1.1821 19 6 4.7006 -7.9978 1.5145 20 6 5.1460 -9.2699 1.8444 21 8 4.2526 -10.2400 2.1724 22 6 4.7826 -11.5257 2.5014 23 9 5.6344 -11.4103 3.6052 24 9 3.7332 -12.3972 2.8118 25 9 5.4993 -12.0279 1.4099 26 6 6.5047 -9.5493 1.8400 27 6 7.4110 -8.5607 1.5078 28 6 6.9644 -7.2955 1.1748 29 6 5.5245 -5.1895 -0.5952 30 7 2.2953 -1.1025 0.0005 31 1 -0.3633 0.0976 -1.0230 32 1 -0.3633 -0.9348 0.4269 33 1 -0.3633 0.8371 0.5960 34 1 0.7392 2.5555 0.1457 35 1 3.1001 3.1640 -1.4307 36 1 2.2677 4.8906 1.3492 37 1 2.2508 2.8684 2.7019 38 1 5.1429 1.7727 1.0278 39 1 5.6644 1.0502 -0.5131 40 1 4.6221 2.4931 -0.5143 41 1 3.7335 -3.3010 0.0004 42 1 7.0714 -4.8162 1.4957 43 1 5.6245 -3.9717 2.1990 44 1 3.6433 -7.7779 1.5169 45 1 6.8538 -10.5388 2.0960 46 1 8.4690 -8.7777 1.5046 47 1 7.6742 -6.5253 0.9114 48 1 4.6977 -5.2060 -1.3052 49 1 6.4184 -5.6859 -0.9732 50 1 1.9834 -2.0210 0.0006 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10860230_12297754.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:50:05 Heat of formation + Delta-G solvation = -163.060970 kcal Electronic energy + Delta-G solvation = -38457.717328 eV Core-core repulsion = 32810.230354 eV Total energy + Delta-G solvation = -5647.486974 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 411.149 amu Computer time = 1.36 seconds Orbital eigenvalues (eV) -51.56393 -49.28311 -49.16109 -42.66028 -41.70344 -40.86537 -39.57882 -38.14617 -37.73861 -34.76046 -33.69418 -32.89564 -32.14262 -31.21094 -29.21608 -27.71439 -27.23426 -26.68699 -26.58111 -25.70355 -23.94116 -23.16227 -22.56853 -21.08759 -20.92493 -20.28178 -20.21789 -20.07216 -19.63801 -19.34713 -17.97875 -17.66760 -17.18111 -17.04841 -16.74201 -16.48718 -16.41986 -16.37014 -15.94378 -15.84631 -15.76887 -15.63873 -15.56902 -15.41095 -15.29939 -15.26939 -15.21432 -14.92084 -14.76025 -14.48396 -14.30332 -14.19760 -14.08005 -13.93286 -13.86145 -13.58420 -13.48008 -13.16420 -13.08655 -12.91333 -12.82137 -12.72145 -12.64179 -12.27669 -12.02943 -11.83854 -11.71855 -11.30031 -11.03339 -10.53063 -10.18033 -9.94054 -9.59496 -9.53270 -8.97422 -4.91465 0.08328 0.20982 0.35720 0.39352 1.24520 1.54240 1.71740 1.74675 1.94305 2.00288 2.13816 2.30025 2.48057 2.65157 2.87518 3.42037 3.56356 3.59465 3.67077 3.69182 3.79856 3.85240 3.88308 3.92863 4.01983 4.04420 4.16089 4.17771 4.25587 4.36051 4.40204 4.49362 4.61176 4.66011 4.70740 4.78430 4.83596 4.86541 4.92566 4.96357 4.98967 4.99722 5.03271 5.06774 5.12332 5.22453 5.24969 5.34357 5.37659 5.46497 5.61502 5.72979 5.87005 5.91960 6.38149 6.55048 6.79772 7.13172 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.097 4.097 2 C 0.082 3.918 3 C -0.228 4.228 4 C -0.026 4.026 5 O -0.557 6.557 6 Si 0.740 3.260 7 C -0.070 4.070 8 C -0.102 4.102 9 C -0.077 4.077 10 C 0.593 3.407 11 O -0.557 6.557 12 N -0.703 5.703 13 C 0.118 3.882 14 H 0.094 0.906 15 C -0.140 4.140 16 C -0.067 4.067 17 H 0.112 0.888 18 C -0.034 4.034 19 C -0.129 4.129 20 C 0.084 3.916 21 O -0.320 6.320 22 C 0.608 3.392 23 F -0.166 7.166 24 F -0.133 7.133 25 F -0.165 7.165 26 C -0.208 4.208 27 C -0.079 4.079 28 C -0.133 4.133 29 C -0.124 4.124 30 N -0.523 5.523 31 H 0.087 0.913 32 H 0.088 0.912 33 H 0.085 0.915 34 H 0.112 0.888 35 H 0.387 0.613 36 H -0.290 1.290 37 H -0.294 1.294 38 H 0.083 0.917 39 H 0.075 0.925 40 H 0.087 0.913 41 H 0.408 0.592 42 H 0.104 0.896 43 H 0.067 0.933 44 H 0.147 0.853 45 H 0.131 0.869 46 H 0.152 0.848 47 H 0.152 0.848 48 H 0.087 0.913 49 H 0.107 0.893 50 H 0.430 0.570 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.702 -1.768 -1.209 2.254 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C -0.038 4.038 3 C -0.234 4.234 4 C -0.138 4.138 5 O -0.365 6.365 6 Si 0.647 3.353 7 C -0.079 4.079 8 C -0.158 4.158 9 C -0.188 4.188 10 C 0.382 3.618 11 O -0.435 6.435 12 N -0.354 5.354 13 C 0.012 3.988 14 H 0.112 0.888 15 C -0.179 4.179 16 C -0.085 4.085 17 H 0.130 0.870 18 C -0.034 4.034 19 C -0.147 4.147 20 C 0.042 3.958 21 O -0.240 6.240 22 C 0.517 3.483 23 F -0.148 7.148 24 F -0.114 7.114 25 F -0.147 7.147 26 C -0.226 4.226 27 C -0.097 4.097 28 C -0.150 4.150 29 C -0.162 4.162 30 N -0.121 5.121 31 H 0.105 0.895 32 H 0.107 0.893 33 H 0.104 0.896 34 H 0.129 0.871 35 H 0.237 0.763 36 H -0.217 1.217 37 H -0.221 1.221 38 H 0.101 0.899 39 H 0.093 0.907 40 H 0.106 0.894 41 H 0.244 0.756 42 H 0.122 0.878 43 H 0.086 0.914 44 H 0.165 0.835 45 H 0.149 0.851 46 H 0.170 0.830 47 H 0.170 0.830 48 H 0.105 0.895 49 H 0.125 0.875 50 H 0.270 0.730 Dipole moment (debyes) X Y Z Total from point charges -0.816 -1.110 -0.502 1.467 hybrid contribution -0.989 -1.631 0.168 1.915 sum -1.805 -2.741 -0.334 3.299 Atomic orbital electron populations 1.20586 0.85800 1.04776 1.04221 1.20680 0.94635 0.85527 1.02909 1.19553 0.92777 0.95398 1.15682 1.24268 1.03359 0.91374 0.94790 1.86463 1.31020 1.80588 1.38419 0.93841 0.91153 0.75664 0.74652 1.20007 0.95093 0.91755 1.01012 1.20476 0.93884 0.98028 1.03445 1.19987 0.83384 0.93987 1.21483 1.17093 0.87159 0.81919 0.75621 1.90818 1.25377 1.75619 1.51702 1.45426 1.10041 1.04774 1.75204 1.21865 0.89140 0.90154 0.97606 0.88787 1.23579 1.01269 0.95739 0.97287 1.21646 1.00755 0.89025 0.97121 0.86966 1.19679 0.92828 0.94738 0.96202 1.20516 1.01810 0.88992 1.03387 1.18967 0.88007 0.88024 1.00801 1.86397 1.36232 1.17900 1.83494 1.19272 0.74420 0.79557 0.75046 1.93304 1.71116 1.95613 1.54736 1.93318 1.58057 1.67324 1.92706 1.93306 1.78344 1.87930 1.55127 1.21688 0.91760 1.02265 1.06930 1.21258 1.00566 0.92203 0.95666 1.21386 0.95647 0.97322 1.00673 1.23402 1.03798 0.93348 0.95610 1.41758 1.04497 1.08993 1.56891 0.89489 0.89279 0.89580 0.87059 0.76287 1.21697 1.22082 0.89865 0.90663 0.89408 0.75639 0.87767 0.91377 0.83480 0.85131 0.83019 0.83037 0.89469 0.87485 0.73009 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.66 10.00 71.24 0.71 1.37 16 2 C 0.08 -0.15 7.13 41.34 0.29 0.14 16 3 C -0.23 -0.27 4.71 -20.12 -0.09 -0.37 16 4 C -0.03 -0.03 2.86 71.24 0.20 0.18 16 5 O -0.56 -1.38 12.88 -148.98 -1.92 -3.30 16 6 Si 0.74 1.12 29.60 68.60 2.03 3.15 16 7 C -0.07 -0.15 5.83 -19.57 -0.11 -0.27 16 8 C -0.10 0.03 7.98 71.24 0.57 0.59 16 9 C -0.08 -0.09 7.06 40.35 0.28 0.20 16 10 C 0.59 1.44 7.79 86.45 0.67 2.11 16 11 O -0.56 -5.24 14.40 -4.32 -0.06 -5.30 16 12 N -0.70 3.30 5.26 -444.01 -2.33 0.97 16 13 C 0.12 -0.59 4.32 45.52 0.20 -0.39 16 14 H 0.09 -0.09 7.46 -2.39 -0.02 -0.11 16 15 C -0.14 0.85 7.25 31.12 0.23 1.08 16 16 C -0.07 0.54 3.85 -11.01 -0.04 0.50 16 17 H 0.11 -1.18 8.09 -2.39 -0.02 -1.20 16 18 C -0.03 0.15 5.29 -19.88 -0.11 0.04 16 19 C -0.13 0.18 9.65 22.37 0.22 0.39 16 20 C 0.08 0.18 6.48 22.51 0.15 0.33 16 21 O -0.32 -1.18 10.37 -92.43 -0.96 -2.14 16 22 C 0.61 1.60 3.42 113.37 0.39 1.99 16 23 F -0.17 -0.47 15.56 44.97 0.70 0.23 16 24 F -0.13 -0.40 17.53 44.97 0.79 0.38 16 25 F -0.17 -0.43 15.56 44.97 0.70 0.27 16 26 C -0.21 -0.19 8.26 22.37 0.18 -0.01 16 27 C -0.08 0.21 10.04 22.25 0.22 0.43 16 28 C -0.13 0.61 8.60 22.28 0.19 0.80 16 29 C -0.12 1.08 7.29 31.12 0.23 1.30 16 30 N -0.52 2.29 5.99 -171.92 -1.03 1.26 16 31 H 0.09 -0.61 8.14 -2.39 -0.02 -0.63 16 32 H 0.09 -0.94 8.14 -2.39 -0.02 -0.96 16 33 H 0.09 -0.58 7.23 -2.39 -0.02 -0.60 16 34 H 0.11 0.02 6.65 -2.39 -0.02 0.00 16 35 H 0.39 -1.50 6.87 -74.06 -0.51 -2.00 16 36 H -0.29 -2.18 7.11 99.48 0.71 -1.47 16 37 H -0.29 -2.18 7.11 99.48 0.71 -1.47 16 38 H 0.08 -0.13 7.64 -2.39 -0.02 -0.14 16 39 H 0.07 0.26 6.48 -2.38 -0.02 0.25 16 40 H 0.09 -0.50 5.30 -2.39 -0.01 -0.51 16 41 H 0.41 -4.30 7.83 -92.71 -0.73 -5.02 16 42 H 0.10 -0.73 6.32 -2.38 -0.02 -0.75 16 43 H 0.07 -0.25 8.14 -2.39 -0.02 -0.27 16 44 H 0.15 -0.64 8.05 -2.91 -0.02 -0.66 16 45 H 0.13 0.08 5.10 -2.91 -0.01 0.07 16 46 H 0.15 -1.03 8.06 -2.91 -0.02 -1.05 16 47 H 0.15 -1.32 6.66 -2.91 -0.02 -1.34 16 48 H 0.09 -0.86 8.14 -2.39 -0.02 -0.88 16 49 H 0.11 -0.98 7.72 -2.38 -0.02 -0.99 16 50 H 0.43 -4.87 8.19 -92.71 -0.76 -5.62 16 Total: 0.00 -20.84 415.40 1.40 -19.43 By element: Atomic # 1 Polarization: -24.49 SS G_CDS: -0.89 Total: -25.38 kcal Atomic # 6 Polarization: 6.05 SS G_CDS: 4.38 Total: 10.43 kcal Atomic # 7 Polarization: 5.59 SS G_CDS: -3.36 Total: 2.22 kcal Atomic # 8 Polarization: -7.80 SS G_CDS: -2.94 Total: -10.74 kcal Atomic # 9 Polarization: -1.31 SS G_CDS: 2.19 Total: 0.88 kcal Atomic # 14 Polarization: 1.12 SS G_CDS: 2.03 Total: 3.15 kcal Total: -20.84 1.40 -19.43 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10860230_12297754.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -143.627 kcal (2) G-P(sol) polarization free energy of solvation -20.838 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -164.465 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.404 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.434 kcal (6) G-S(sol) free energy of system = (1) + (5) -163.061 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.36 seconds