Wall clock time and date at job start Sat Mar 6 2021 13:50:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86300 * 109.47101 * 2 1 4 4 C 1.50702 * 109.47376 * 120.00028 * 2 1 3 5 5 C 1.34448 * 126.47997 * 255.02846 * 4 2 1 6 6 N 1.36565 * 109.98145 * 179.97438 * 5 4 2 7 7 C 1.37823 * 109.86473 * 359.97438 * 6 5 4 8 8 C 1.38650 * 133.38443 * 179.97438 * 7 6 5 9 9 C 1.39314 * 119.67092 * 180.02562 * 8 7 6 10 10 C 1.47577 * 119.83450 * 180.02562 * 9 8 7 11 11 O 1.21589 * 119.99894 * 359.97438 * 10 9 8 12 12 N 1.34778 * 120.00051 * 179.97438 * 10 9 8 13 13 C 1.46502 * 119.99986 * 180.02562 * 12 10 9 14 14 H 1.09000 * 112.84731 * 334.66472 * 13 12 10 15 15 C 1.53780 * 113.61452 * 105.86370 * 13 12 10 16 16 C 1.54050 * 86.98526 * 89.16022 * 15 13 12 17 17 H 1.08995 * 113.68895 * 270.87054 * 16 15 13 18 18 C 1.50698 * 113.61771 * 139.97670 * 16 15 13 19 19 C 1.38247 * 119.97422 * 322.50527 * 18 16 15 20 20 C 1.38287 * 120.11442 * 179.97438 * 19 18 16 21 21 C 1.38130 * 120.05463 * 359.97438 * 20 19 18 22 22 C 1.38758 * 119.94215 * 0.02562 * 21 20 19 23 23 O 1.35900 * 120.05295 * 180.02562 * 22 21 20 24 24 C 1.42902 * 116.99887 * 0.02562 * 23 22 21 25 25 F 1.39890 * 109.47288 * 59.99850 * 24 23 22 26 26 F 1.39903 * 109.46976 * 180.02562 * 24 23 22 27 27 F 1.39899 * 109.47019 * 299.99520 * 24 23 22 28 28 C 1.38165 * 119.97314 * 142.22792 * 18 16 15 29 29 C 1.53780 * 87.07820 * 25.42938 * 16 15 13 30 30 C 1.40202 * 120.33295 * 359.97438 * 9 8 7 31 31 C 1.36231 * 120.38088 * 359.97438 * 30 9 8 32 32 C 1.39876 * 119.96018 * 0.02562 * 31 30 9 33 33 H 0.96691 * 114.00039 * 299.99906 * 1 2 3 34 34 H 1.08997 * 109.47214 * 240.00255 * 2 1 3 35 35 H 1.48508 * 109.99894 * 300.00165 * 3 2 1 36 36 H 1.48497 * 109.99818 * 61.31767 * 3 2 1 37 37 H 1.07998 * 125.01304 * 359.95841 * 5 4 2 38 38 H 0.97003 * 125.06863 * 179.73396 * 6 5 4 39 39 H 1.08003 * 120.15970 * 0.03790 * 8 7 6 40 40 H 0.97002 * 119.99951 * 0.02562 * 12 10 9 41 41 H 1.09001 * 113.61236 * 203.66537 * 15 13 12 42 42 H 1.08993 * 113.61580 * 334.56531 * 15 13 12 43 43 H 1.08003 * 119.94155 * 359.97438 * 19 18 16 44 44 H 1.07994 * 119.97374 * 180.02562 * 20 19 18 45 45 H 1.07991 * 120.02809 * 180.02562 * 21 20 19 46 46 H 1.08001 * 120.02901 * 0.02562 * 28 18 16 47 47 H 1.09003 * 113.61715 * 220.02316 * 29 16 15 48 48 H 1.09000 * 113.68958 * 89.12806 * 29 16 15 49 49 H 1.07997 * 119.80943 * 180.02562 * 30 9 8 50 50 H 1.07999 * 120.02236 * 179.97438 * 31 30 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 2.4612 -0.1362 2.3247 6 7 2.8027 -1.0946 3.2356 7 6 2.4937 -2.3430 2.7401 8 6 2.6302 -3.6279 3.2431 9 6 2.2125 -4.7155 2.4792 10 6 2.3555 -6.0845 3.0113 11 8 2.8374 -6.2611 4.1136 12 7 1.9521 -7.1391 2.2754 13 6 2.0936 -8.4982 2.8038 14 1 2.8904 -8.5842 3.5426 15 6 0.7640 -9.1249 3.2558 16 6 0.6122 -9.6443 1.8135 17 1 0.1019 -8.9475 1.1486 18 6 0.0592 -11.0436 1.7307 19 6 0.4324 -11.9903 2.6666 20 6 -0.0737 -13.2751 2.5938 21 6 -0.9543 -13.6157 1.5855 22 6 -1.3304 -12.6674 0.6449 23 8 -2.1970 -12.9998 -0.3477 24 6 -2.6821 -14.3439 -0.3622 25 9 -3.3600 -14.6080 0.8326 26 9 -3.5558 -14.5127 -1.4418 27 9 -1.6049 -15.2270 -0.4923 28 6 -0.8249 -11.3780 0.7230 29 6 2.1454 -9.5809 1.7130 30 6 1.6560 -4.5158 1.2080 31 6 1.5173 -3.2568 0.7065 32 6 1.9319 -2.1546 1.4614 33 1 -0.3933 0.4416 0.7650 34 1 1.7923 -0.5138 -0.8900 35 1 1.5614 2.4679 -1.2085 36 1 1.5878 2.4585 1.2242 37 1 2.5969 0.9262 2.4628 38 1 3.2062 -0.9226 4.1008 39 1 3.0580 -3.7846 4.2223 40 1 1.5681 -6.9983 1.3958 41 1 0.8837 -9.9171 3.9948 42 1 0.0094 -8.3912 3.5389 43 1 1.1205 -11.7258 3.4560 44 1 0.2191 -14.0127 3.3263 45 1 -1.3496 -14.6190 1.5292 46 1 -1.1194 -10.6371 -0.0055 47 1 2.5053 -9.2150 0.7513 48 1 2.6434 -10.4970 2.0305 49 1 1.3346 -5.3650 0.6232 50 1 1.0882 -3.1097 -0.2736 There are 78 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 78 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10860230_12335838.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:50:27 Heat of formation + Delta-G solvation = -139.248504 kcal Electronic energy + Delta-G solvation = -40091.908794 eV Core-core repulsion = 34216.313603 eV Total energy + Delta-G solvation = -5875.595191 eV No. of doubly occupied orbitals = 78 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 433.133 amu Computer time = 1.59 seconds Orbital eigenvalues (eV) -51.44323 -49.15455 -49.04298 -42.51367 -41.80665 -41.02688 -39.85862 -38.28767 -37.90997 -37.46081 -34.56464 -33.28697 -32.31681 -31.37029 -30.74078 -30.40940 -27.24096 -26.83801 -26.63372 -26.28589 -24.68868 -23.93299 -23.64098 -22.97320 -21.61191 -21.00692 -20.84778 -20.16236 -20.05347 -19.72428 -19.46232 -18.48349 -17.95039 -17.67523 -17.19988 -17.13513 -16.98216 -16.49159 -16.28494 -16.24467 -16.09098 -15.87110 -15.78545 -15.70708 -15.65848 -15.52331 -15.44501 -15.23114 -15.16697 -15.13571 -15.04955 -14.78331 -14.72557 -14.61003 -14.37913 -14.18991 -13.95778 -13.90472 -13.63463 -13.12853 -13.00134 -12.86414 -12.79843 -12.61153 -12.50552 -12.19721 -11.94040 -11.81794 -11.80458 -11.39420 -10.94391 -10.77843 -10.51201 -10.11639 -9.97688 -9.60638 -9.37435 -8.84045 -4.99514 -0.28151 0.06476 0.17913 0.37884 0.44594 1.26640 1.33982 1.52245 1.81455 1.83485 1.92835 1.99411 2.17678 2.44990 2.75488 2.91136 2.97736 3.30568 3.44922 3.48640 3.54113 3.56324 3.59634 3.70001 3.73149 3.78556 3.83311 3.84796 3.94350 4.07845 4.09529 4.16906 4.29676 4.34611 4.41205 4.46932 4.54329 4.55129 4.61438 4.71620 4.75723 4.78619 4.85647 4.91845 4.95910 4.97234 5.01851 5.20560 5.21783 5.29881 5.40790 5.41815 5.47041 5.57032 5.59314 5.83489 5.96673 6.33345 6.46158 6.46965 7.21568 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.531 6.531 2 C -0.038 4.038 3 Si 0.684 3.316 4 C -0.206 4.206 5 C 0.074 3.926 6 N -0.583 5.583 7 C 0.082 3.918 8 C -0.055 4.055 9 C -0.122 4.122 10 C 0.567 3.433 11 O -0.536 6.536 12 N -0.710 5.710 13 C 0.121 3.879 14 H 0.107 0.893 15 C -0.143 4.143 16 C -0.075 4.075 17 H 0.102 0.898 18 C -0.034 4.034 19 C -0.133 4.133 20 C -0.074 4.074 21 C -0.194 4.194 22 C 0.107 3.893 23 O -0.311 6.311 24 C 0.604 3.396 25 F -0.164 7.164 26 F -0.130 7.130 27 F -0.164 7.164 28 C -0.121 4.121 29 C -0.134 4.134 30 C -0.113 4.113 31 C -0.072 4.072 32 C -0.062 4.062 33 H 0.374 0.626 34 H 0.115 0.885 35 H -0.256 1.256 36 H -0.260 1.260 37 H 0.176 0.824 38 H 0.422 0.578 39 H 0.136 0.864 40 H 0.402 0.598 41 H 0.098 0.902 42 H 0.077 0.923 43 H 0.133 0.867 44 H 0.135 0.865 45 H 0.133 0.867 46 H 0.138 0.862 47 H 0.080 0.920 48 H 0.101 0.899 49 H 0.125 0.875 50 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.223 2.867 0.146 4.316 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.148 4.148 3 Si 0.585 3.415 4 C -0.214 4.214 5 C -0.054 4.054 6 N -0.186 5.186 7 C -0.025 4.025 8 C -0.077 4.077 9 C -0.126 4.126 10 C 0.355 3.645 11 O -0.413 6.413 12 N -0.361 5.361 13 C 0.015 3.985 14 H 0.125 0.875 15 C -0.182 4.182 16 C -0.094 4.094 17 H 0.120 0.880 18 C -0.034 4.034 19 C -0.151 4.151 20 C -0.092 4.092 21 C -0.213 4.213 22 C 0.065 3.935 23 O -0.231 6.231 24 C 0.514 3.486 25 F -0.146 7.146 26 F -0.111 7.111 27 F -0.147 7.147 28 C -0.139 4.139 29 C -0.172 4.172 30 C -0.133 4.133 31 C -0.090 4.090 32 C -0.067 4.067 33 H 0.221 0.779 34 H 0.133 0.867 35 H -0.180 1.180 36 H -0.185 1.185 37 H 0.193 0.807 38 H 0.260 0.740 39 H 0.154 0.846 40 H 0.238 0.762 41 H 0.116 0.884 42 H 0.096 0.904 43 H 0.151 0.849 44 H 0.152 0.848 45 H 0.151 0.849 46 H 0.156 0.844 47 H 0.098 0.902 48 H 0.119 0.881 49 H 0.143 0.857 50 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges 3.418 3.376 0.354 4.818 hybrid contribution -1.366 -0.490 0.457 1.522 sum 2.052 2.887 0.810 3.633 Atomic orbital electron populations 1.86609 1.18059 1.79926 1.49082 1.24291 0.83388 1.09892 0.97241 0.95177 0.91494 0.74308 0.80543 1.20673 1.10589 0.92100 0.98063 1.21824 0.99734 0.94506 0.89375 1.41724 1.54548 1.04030 1.18249 1.18081 1.03224 0.86293 0.94883 1.20072 0.99408 0.88065 1.00125 1.19398 1.05129 0.92239 0.95852 1.18147 0.77215 0.84512 0.84590 1.90797 1.44321 1.86122 1.20066 1.45564 1.64327 1.05300 1.20952 1.21840 0.98809 0.80701 0.97136 0.87468 1.23632 0.98110 1.00748 0.95680 1.21702 0.96187 0.92629 0.98855 0.87997 1.19505 0.94903 0.95462 0.93545 1.21108 1.01414 0.92908 0.99665 1.20978 0.94843 0.96591 0.96770 1.21564 1.02930 0.99480 0.97323 1.18682 0.91773 0.95113 0.87960 1.86424 1.60223 1.26016 1.50468 1.19337 0.75887 0.78527 0.74865 1.93310 1.80728 1.93723 1.46880 1.93329 1.68504 1.94423 1.54893 1.93311 1.55981 1.69810 1.95549 1.20299 0.99493 0.93360 1.00765 1.23429 0.94796 0.99285 0.99710 1.20677 1.00615 0.97342 0.94691 1.20205 0.98662 0.90452 0.99688 1.19170 1.00964 0.93035 0.93572 0.77880 0.86698 1.18035 1.18495 0.80690 0.74003 0.84604 0.76206 0.88410 0.90404 0.84926 0.84761 0.84914 0.84423 0.90166 0.88059 0.85673 0.85136 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.46 12.88 -35.23 -0.45 -0.91 16 2 C -0.04 0.03 3.06 36.01 0.11 0.14 16 3 Si 0.68 -1.45 30.82 -169.99 -5.24 -6.69 16 4 C -0.21 0.07 5.57 -102.74 -0.57 -0.50 16 5 C 0.07 -0.15 10.43 -16.78 -0.18 -0.32 16 6 N -0.58 0.94 6.07 -10.68 -0.06 0.87 16 7 C 0.08 0.07 7.26 -84.00 -0.61 -0.54 16 8 C -0.06 -0.09 9.61 -39.03 -0.37 -0.46 16 9 C -0.12 -0.16 5.87 -104.95 -0.62 -0.78 16 10 C 0.57 1.24 7.76 -12.45 -0.10 1.14 16 11 O -0.54 -3.07 15.93 5.29 0.08 -2.99 16 12 N -0.71 0.64 5.21 -54.04 -0.28 0.35 16 13 C 0.12 -0.15 4.30 -67.12 -0.29 -0.44 16 14 H 0.11 0.03 7.50 -51.93 -0.39 -0.36 16 15 C -0.14 0.25 7.27 -25.78 -0.19 0.07 16 16 C -0.08 0.19 3.87 -90.82 -0.35 -0.16 16 17 H 0.10 -0.35 8.09 -51.93 -0.42 -0.77 16 18 C -0.03 0.03 5.29 -104.65 -0.55 -0.52 16 19 C -0.13 0.16 8.61 -39.56 -0.34 -0.18 16 20 C -0.07 0.05 10.04 -39.60 -0.40 -0.35 16 21 C -0.19 -0.15 8.26 -39.43 -0.33 -0.47 16 22 C 0.11 0.15 6.48 -39.21 -0.25 -0.10 16 23 O -0.31 -0.61 10.37 -19.43 -0.20 -0.81 16 24 C 0.60 0.79 3.42 101.05 0.35 1.14 16 25 F -0.16 -0.23 15.56 2.25 0.04 -0.19 16 26 F -0.13 -0.20 17.53 2.25 0.04 -0.16 16 27 F -0.16 -0.21 15.56 2.25 0.04 -0.18 16 28 C -0.12 -0.01 9.65 -39.43 -0.38 -0.39 16 29 C -0.13 0.39 7.28 -25.92 -0.19 0.20 16 30 C -0.11 0.04 9.46 -39.57 -0.37 -0.34 16 31 C -0.07 -0.03 10.03 -39.69 -0.40 -0.43 16 32 C -0.06 -0.08 6.35 -105.04 -0.67 -0.74 16 33 H 0.37 -0.72 8.70 45.56 0.40 -0.32 16 34 H 0.12 -0.14 7.96 -51.93 -0.41 -0.55 16 35 H -0.26 -0.39 7.11 56.52 0.40 0.01 16 36 H -0.26 0.21 7.00 56.52 0.40 0.61 16 37 H 0.18 -0.82 6.27 -52.49 -0.33 -1.15 16 38 H 0.42 -1.80 8.96 -40.82 -0.37 -2.17 16 39 H 0.14 0.19 7.62 -52.48 -0.40 -0.21 16 40 H 0.40 -1.31 6.69 -40.82 -0.27 -1.59 16 41 H 0.10 -0.23 6.31 -51.93 -0.33 -0.55 16 42 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 43 H 0.13 -0.39 6.65 -52.48 -0.35 -0.74 16 44 H 0.13 -0.34 8.06 -52.49 -0.42 -0.76 16 45 H 0.13 0.04 5.10 -52.49 -0.27 -0.22 16 46 H 0.14 -0.17 8.05 -52.49 -0.42 -0.59 16 47 H 0.08 -0.26 8.14 -51.93 -0.42 -0.69 16 48 H 0.10 -0.32 7.73 -51.93 -0.40 -0.72 16 49 H 0.13 -0.40 6.36 -52.49 -0.33 -0.73 16 50 H 0.13 -0.09 8.06 -52.49 -0.42 -0.51 16 LS Contribution 428.32 15.07 6.45 6.45 Total: 0.00 -9.30 428.32 -11.48 -20.78 By element: Atomic # 1 Polarization: -7.31 SS G_CDS: -5.19 Total: -12.50 kcal Atomic # 6 Polarization: 2.66 SS G_CDS: -6.70 Total: -4.04 kcal Atomic # 7 Polarization: 1.57 SS G_CDS: -0.35 Total: 1.23 kcal Atomic # 8 Polarization: -4.14 SS G_CDS: -0.57 Total: -4.71 kcal Atomic # 9 Polarization: -0.64 SS G_CDS: 0.11 Total: -0.53 kcal Atomic # 14 Polarization: -1.45 SS G_CDS: -5.24 Total: -6.69 kcal Total LS contribution 6.45 Total: 6.45 kcal Total: -9.30 -11.48 -20.78 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10860230_12335838.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -118.468 kcal (2) G-P(sol) polarization free energy of solvation -9.300 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -127.768 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.481 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.781 kcal (6) G-S(sol) free energy of system = (1) + (5) -139.249 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.60 seconds