Wall clock time and date at job start Sat Mar 6 2021 13:51:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35656 * 117.00161 * 2 1 4 4 C 1.40135 * 120.14992 * 179.97438 * 3 2 1 5 5 C 1.47539 * 120.19068 * 0.04509 * 4 3 2 6 6 O 1.21588 * 120.00129 * 359.97438 * 5 4 3 7 7 N 1.34773 * 119.99642 * 180.02562 * 5 4 3 8 8 C 1.46503 * 119.99964 * 179.97438 * 7 5 4 9 9 H 1.09009 * 112.84582 * 334.66425 * 8 7 5 10 10 C 1.53778 * 113.61599 * 105.85888 * 8 7 5 11 11 C 1.54052 * 86.98157 * 89.16382 * 10 8 7 12 12 H 1.08998 * 113.61465 * 270.87965 * 11 10 8 13 13 C 1.50702 * 113.69262 * 139.98881 * 11 10 8 14 14 C 1.38134 * 119.97058 * 142.46282 * 13 11 10 15 15 C 1.38752 * 119.94271 * 179.97438 * 14 13 11 16 16 O 1.35903 * 120.05436 * 180.02562 * 15 14 13 17 17 C 1.42901 * 116.99847 * 180.02562 * 16 15 14 18 18 F 1.39901 * 109.47278 * 59.99986 * 17 16 15 19 19 F 1.39901 * 109.47011 * 180.02562 * 17 16 15 20 20 F 1.39904 * 109.46799 * 300.00098 * 17 16 15 21 21 C 1.38714 * 119.88738 * 0.02562 * 15 14 13 22 22 C 1.38163 * 119.94625 * 359.97438 * 21 15 14 23 23 C 1.38238 * 120.05700 * 359.72671 * 22 21 15 24 24 C 1.53780 * 87.08066 * 25.43240 * 11 10 8 25 25 C 1.39701 * 119.61718 * 180.02562 * 4 3 2 26 26 C 1.37792 * 119.90795 * 0.02562 * 25 4 3 27 27 C 1.50702 * 119.85272 * 179.97438 * 26 25 4 28 28 O 1.42905 * 109.46840 * 64.99559 * 27 26 25 29 29 Si 1.86296 * 109.47454 * 184.99879 * 27 26 25 30 30 C 1.38546 * 120.29935 * 359.73992 * 26 25 4 31 31 C 1.38054 * 120.39080 * 0.51905 * 30 26 25 32 32 H 1.09000 * 109.47458 * 180.02562 * 1 2 3 33 33 H 1.08998 * 109.47606 * 300.00349 * 1 2 3 34 34 H 1.09006 * 109.47060 * 60.00550 * 1 2 3 35 35 H 0.97003 * 120.00415 * 359.97438 * 7 5 4 36 36 H 1.09001 * 113.61356 * 203.66431 * 10 8 7 37 37 H 1.08996 * 113.61389 * 334.57239 * 10 8 7 38 38 H 1.07997 * 120.02563 * 0.02669 * 14 13 11 39 39 H 1.08004 * 120.02415 * 180.02562 * 21 15 14 40 40 H 1.07997 * 119.96970 * 180.02562 * 22 21 15 41 41 H 1.08001 * 119.94778 * 180.29364 * 23 22 21 42 42 H 1.08996 * 113.61212 * 220.02391 * 24 11 10 43 43 H 1.09000 * 113.61550 * 89.12034 * 24 11 10 44 44 H 1.07997 * 120.04701 * 180.02562 * 25 4 3 45 45 H 1.09006 * 109.46681 * 305.00297 * 27 26 25 46 46 H 0.96698 * 114.00207 * 60.00423 * 28 27 26 47 47 H 1.48498 * 109.99977 * 180.02562 * 29 27 26 48 48 H 1.48506 * 109.99754 * 301.31655 * 29 27 26 49 49 H 1.08001 * 119.80557 * 180.25846 * 30 26 25 50 50 H 1.08002 * 119.96228 * 179.76719 * 31 30 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0449 1.2087 0.0000 4 6 3.4441 1.2857 0.0005 5 6 4.2550 0.0531 0.0001 6 8 3.7094 -1.0336 -0.0002 7 7 5.6004 0.1316 0.0012 8 6 6.4057 -1.0923 0.0013 9 1 5.8794 -1.9450 0.4305 10 6 7.0669 -1.3947 -1.3537 11 6 8.2586 -0.5471 -0.8693 12 1 8.1662 0.5125 -1.1075 13 6 9.6011 -1.1172 -1.2485 14 6 10.6309 -0.2726 -1.6148 15 6 11.8669 -0.7980 -1.9633 16 8 12.8818 0.0309 -2.3236 17 6 14.1263 -0.5799 -2.6703 18 9 13.9373 -1.4379 -3.7590 19 9 15.0528 0.4110 -3.0122 20 9 14.6072 -1.3108 -1.5786 21 6 12.0648 -2.1708 -1.9435 22 6 11.0315 -3.0114 -1.5764 23 6 9.8029 -2.4851 -1.2236 24 6 7.8235 -0.8967 0.5637 25 6 4.0668 2.5362 0.0011 26 6 3.3038 3.6836 0.0016 27 6 3.9768 5.0320 0.0028 28 8 4.6995 5.2047 -1.2179 29 14 2.6886 6.3690 0.1563 30 6 1.9207 3.6033 -0.0038 31 6 1.2924 2.3740 0.0010 32 1 -0.3634 -1.0276 0.0005 33 1 -0.3634 0.5139 0.8899 34 1 -0.3633 0.5138 -0.8901 35 1 6.0357 0.9985 0.0018 36 1 7.3094 -2.4479 -1.4958 37 1 6.5387 -0.9625 -2.2035 38 1 10.4744 0.7959 -1.6290 39 1 13.0261 -2.5822 -2.2140 40 1 11.1853 -4.0802 -1.5605 41 1 8.9979 -3.1435 -0.9324 42 1 7.9057 -0.0627 1.2606 43 1 8.2725 -1.8139 0.9448 44 1 5.1446 2.6036 0.0011 45 1 4.6662 5.0932 0.8449 46 1 4.1479 5.1618 -2.0110 47 1 3.3395 7.7037 0.1580 48 1 1.7239 6.2764 -0.9690 49 1 1.3304 4.5077 -0.0076 50 1 0.2138 2.3195 0.0005 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10860230_12496546.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:51:18 Heat of formation + Delta-G solvation = -200.926640 kcal Electronic energy + Delta-G solvation = -40261.169230 eV Core-core repulsion = 34386.095475 eV Total energy + Delta-G solvation = -5875.073755 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 424.138 amu Computer time = 1.40 seconds Orbital eigenvalues (eV) -51.55322 -49.27199 -49.15022 -41.95719 -41.51870 -40.73165 -39.51892 -39.21215 -38.11524 -37.21522 -34.64622 -32.75184 -32.05543 -31.80110 -31.10848 -28.52633 -27.27981 -26.69113 -26.41328 -26.15219 -25.04072 -23.91799 -23.17012 -22.57194 -21.57023 -20.99141 -20.27169 -20.14290 -19.72214 -19.41420 -18.44555 -18.26821 -17.85614 -17.23344 -17.15234 -16.90460 -16.81139 -16.37806 -16.36237 -16.15284 -16.01916 -15.96611 -15.90117 -15.81775 -15.63491 -15.59687 -15.55353 -15.27534 -15.26177 -15.13734 -14.74742 -14.55661 -14.51894 -14.40560 -14.18481 -13.90451 -13.58217 -13.47731 -13.39950 -13.10298 -12.90578 -12.80695 -12.70097 -12.42817 -12.20587 -12.03320 -11.83035 -11.70986 -11.65131 -11.28063 -11.03808 -10.54008 -10.26399 -10.01390 -9.92893 -9.58536 -9.29121 -4.88788 -0.25699 0.09163 0.21890 0.22567 0.36843 1.34407 1.61573 1.72449 1.77249 1.99992 2.07022 2.27843 2.48697 2.66183 2.68147 2.88555 3.42582 3.43293 3.56716 3.57303 3.60292 3.64681 3.71765 3.75081 3.87598 3.93250 4.00168 4.04806 4.16031 4.19028 4.27085 4.31514 4.36876 4.40245 4.41591 4.63723 4.64750 4.69722 4.74647 4.78450 4.85255 4.87720 4.94324 4.96830 4.99744 5.03357 5.11233 5.16360 5.25975 5.28646 5.34991 5.48938 5.57353 5.64820 5.87790 6.30786 6.52299 6.52583 7.22559 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.011 3.989 2 O -0.313 6.313 3 C 0.172 3.828 4 C -0.197 4.197 5 C 0.560 3.440 6 O -0.562 6.562 7 N -0.700 5.700 8 C 0.116 3.884 9 H 0.087 0.913 10 C -0.141 4.141 11 C -0.067 4.067 12 H 0.112 0.888 13 C -0.034 4.034 14 C -0.128 4.128 15 C 0.084 3.916 16 O -0.320 6.320 17 C 0.608 3.392 18 F -0.166 7.166 19 F -0.133 7.133 20 F -0.165 7.165 21 C -0.207 4.207 22 C -0.079 4.079 23 C -0.133 4.133 24 C -0.122 4.122 25 C -0.015 4.015 26 C -0.164 4.164 27 C -0.072 4.072 28 O -0.546 6.546 29 Si 0.760 3.240 30 C -0.045 4.045 31 C -0.213 4.213 32 H 0.107 0.893 33 H 0.075 0.925 34 H 0.071 0.929 35 H 0.411 0.589 36 H 0.103 0.897 37 H 0.065 0.935 38 H 0.147 0.853 39 H 0.132 0.868 40 H 0.153 0.847 41 H 0.151 0.849 42 H 0.089 0.911 43 H 0.108 0.892 44 H 0.152 0.848 45 H 0.132 0.868 46 H 0.386 0.614 47 H -0.307 1.307 48 H -0.280 1.280 49 H 0.155 0.845 50 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.261 2.444 2.980 5.745 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.083 4.083 2 O -0.224 6.224 3 C 0.123 3.877 4 C -0.201 4.201 5 C 0.349 3.651 6 O -0.442 6.442 7 N -0.353 5.353 8 C 0.010 3.990 9 H 0.106 0.894 10 C -0.179 4.179 11 C -0.085 4.085 12 H 0.130 0.870 13 C -0.034 4.034 14 C -0.147 4.147 15 C 0.043 3.957 16 O -0.240 6.240 17 C 0.517 3.483 18 F -0.148 7.148 19 F -0.114 7.114 20 F -0.147 7.147 21 C -0.226 4.226 22 C -0.096 4.096 23 C -0.151 4.151 24 C -0.159 4.159 25 C -0.033 4.033 26 C -0.165 4.165 27 C -0.181 4.181 28 O -0.355 6.355 29 Si 0.666 3.334 30 C -0.062 4.062 31 C -0.231 4.231 32 H 0.126 0.874 33 H 0.093 0.907 34 H 0.089 0.911 35 H 0.249 0.751 36 H 0.122 0.878 37 H 0.084 0.916 38 H 0.165 0.835 39 H 0.150 0.850 40 H 0.170 0.830 41 H 0.168 0.832 42 H 0.108 0.892 43 H 0.126 0.874 44 H 0.169 0.831 45 H 0.149 0.851 46 H 0.235 0.765 47 H -0.235 1.235 48 H -0.207 1.207 49 H 0.172 0.828 50 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges -4.398 2.375 3.009 5.834 hybrid contribution 0.831 -0.027 -1.521 1.734 sum -3.566 2.348 1.488 4.521 Atomic orbital electron populations 1.23445 0.76554 1.05479 1.02822 1.86335 1.23168 1.26396 1.86532 1.19420 0.91380 0.85518 0.91347 1.19408 0.91113 0.94023 1.15525 1.18264 0.82576 0.88589 0.75698 1.90813 1.72446 1.30289 1.50613 1.45486 1.04937 1.09916 1.74960 1.21850 0.91565 0.87898 0.97657 0.89445 1.23620 0.95555 1.01502 0.97266 1.21680 0.89227 1.00548 0.97052 0.87010 1.19666 0.94419 0.93143 0.96139 1.20514 0.89250 1.01761 1.03152 1.18950 0.87169 0.89126 1.00487 1.86401 1.18769 1.36282 1.82551 1.19273 0.79401 0.74523 0.75098 1.93305 1.94809 1.70765 1.55883 1.93318 1.63785 1.62331 1.91960 1.93306 1.88637 1.77660 1.55090 1.21684 1.02294 0.91759 1.06828 1.21248 0.91864 1.00930 0.95600 1.21374 0.97971 0.94975 1.00752 1.23385 0.92744 1.04245 0.95574 1.21119 1.00751 0.89113 0.92364 1.20155 0.93733 0.95886 1.06684 1.25089 1.04480 0.98608 0.89933 1.86583 1.38409 1.94244 1.16216 0.94174 0.76808 0.74161 0.88276 1.21313 0.93941 0.97931 0.93033 1.21460 1.01728 0.90938 1.09010 0.87433 0.90669 0.91075 0.75051 0.87845 0.91634 0.83532 0.85035 0.82967 0.83171 0.89208 0.87403 0.83058 0.85066 0.76472 1.23518 1.20684 0.82803 0.82161 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.02 9.81 113.37 1.11 1.09 16 2 O -0.31 -2.39 8.57 -68.80 -0.59 -2.98 16 3 C 0.17 0.75 6.70 22.84 0.15 0.90 16 4 C -0.20 -0.76 5.89 -20.01 -0.12 -0.88 16 5 C 0.56 4.06 7.76 86.70 0.67 4.74 16 6 O -0.56 -9.02 14.78 16.93 0.25 -8.77 16 7 N -0.70 0.20 5.21 -443.19 -2.31 -2.11 16 8 C 0.12 -0.13 4.29 45.52 0.20 0.06 16 9 H 0.09 0.29 7.50 -2.38 -0.02 0.27 16 10 C -0.14 0.37 7.27 31.21 0.23 0.59 16 11 C -0.07 0.34 3.86 -10.92 -0.04 0.30 16 12 H 0.11 -0.78 8.09 -2.39 -0.02 -0.80 16 13 C -0.03 0.07 5.29 -19.88 -0.11 -0.04 16 14 C -0.13 -0.08 9.65 22.37 0.22 0.13 16 15 C 0.08 0.31 6.48 22.51 0.15 0.46 16 16 O -0.32 -1.61 10.37 -92.46 -0.96 -2.57 16 17 C 0.61 2.25 3.42 113.37 0.39 2.64 16 18 F -0.17 -0.63 15.56 44.97 0.70 0.07 16 19 F -0.13 -0.54 17.53 44.97 0.79 0.25 16 20 F -0.16 -0.59 15.56 44.97 0.70 0.11 16 21 C -0.21 -0.46 8.26 22.37 0.18 -0.28 16 22 C -0.08 0.10 10.04 22.25 0.22 0.32 16 23 C -0.13 0.36 8.60 22.28 0.19 0.55 16 24 C -0.12 0.71 7.29 31.12 0.23 0.94 16 25 C -0.01 0.03 9.16 22.52 0.21 0.24 16 26 C -0.16 0.64 5.35 -19.90 -0.11 0.53 16 27 C -0.07 0.37 2.79 71.24 0.20 0.57 16 28 O -0.55 1.11 12.83 -148.98 -1.91 -0.81 16 29 Si 0.76 -4.15 29.88 68.60 2.05 -2.10 16 30 C -0.04 0.21 8.65 22.30 0.19 0.40 16 31 C -0.21 0.44 9.03 22.34 0.20 0.65 16 32 H 0.11 -0.34 8.14 -2.39 -0.02 -0.36 16 33 H 0.07 -0.43 7.66 -2.39 -0.02 -0.44 16 34 H 0.07 -0.37 7.66 -2.38 -0.02 -0.38 16 35 H 0.41 -2.43 6.73 -92.71 -0.62 -3.06 16 36 H 0.10 -0.41 6.34 -2.39 -0.02 -0.42 16 37 H 0.06 0.01 8.14 -2.39 -0.02 -0.01 16 38 H 0.15 -0.30 8.05 -2.91 -0.02 -0.32 16 39 H 0.13 0.22 5.10 -2.91 -0.01 0.21 16 40 H 0.15 -0.84 8.06 -2.91 -0.02 -0.86 16 41 H 0.15 -0.99 6.68 -2.91 -0.02 -1.01 16 42 H 0.09 -0.66 8.14 -2.39 -0.02 -0.68 16 43 H 0.11 -0.73 7.71 -2.39 -0.02 -0.75 16 44 H 0.15 -0.99 6.40 -2.91 -0.02 -1.01 16 45 H 0.13 -0.98 7.96 -2.38 -0.02 -1.00 16 46 H 0.39 -2.65 8.70 -74.06 -0.64 -3.30 16 47 H -0.31 -1.00 7.11 99.48 0.71 -0.30 16 48 H -0.28 0.57 7.00 99.48 0.70 1.27 16 49 H 0.15 -1.40 4.81 -2.91 -0.01 -1.41 16 50 H 0.16 -1.11 6.30 -2.91 -0.02 -1.13 16 Total: 0.00 -23.39 422.19 2.90 -20.49 By element: Atomic # 1 Polarization: -15.32 SS G_CDS: -0.18 Total: -15.50 kcal Atomic # 6 Polarization: 9.56 SS G_CDS: 4.37 Total: 13.93 kcal Atomic # 7 Polarization: 0.20 SS G_CDS: -2.31 Total: -2.11 kcal Atomic # 8 Polarization: -11.92 SS G_CDS: -3.21 Total: -15.13 kcal Atomic # 9 Polarization: -1.76 SS G_CDS: 2.19 Total: 0.43 kcal Atomic # 14 Polarization: -4.15 SS G_CDS: 2.05 Total: -2.10 kcal Total: -23.39 2.90 -20.49 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10860230_12496546.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -180.438 kcal (2) G-P(sol) polarization free energy of solvation -23.389 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -203.827 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.900 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.488 kcal (6) G-S(sol) free energy of system = (1) + (5) -200.927 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.40 seconds