Wall clock time and date at job start Sat Mar 6 2021 13:53:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 C 1.37879 * 126.45312 * 2 1 4 4 C 1.46672 * 126.23408 * 359.96333 * 3 2 1 5 5 O 1.21696 * 120.00302 * 0.02562 * 4 3 2 6 6 N 1.34777 * 120.00257 * 180.02562 * 4 3 2 7 7 C 1.46500 * 120.00235 * 180.02562 * 6 4 3 8 8 H 1.09006 * 112.84964 * 336.19166 * 7 6 4 9 9 C 1.53950 * 113.61766 * 107.46682 * 7 6 4 10 10 C 1.53778 * 87.02073 * 89.19850 * 9 7 6 11 11 H 1.09008 * 113.61792 * 270.77370 * 10 9 7 12 12 C 1.50696 * 113.61628 * 139.95506 * 10 9 7 13 13 C 1.38122 * 119.97676 * 140.84285 * 12 10 9 14 14 C 1.38751 * 119.94677 * 180.02562 * 13 12 10 15 15 O 1.35905 * 120.05484 * 179.97438 * 14 13 12 16 16 C 1.42900 * 116.99676 * 180.02562 * 15 14 13 17 17 F 1.39896 * 109.47405 * 60.00501 * 16 15 14 18 18 F 1.39902 * 109.46811 * 180.02562 * 16 15 14 19 19 F 1.39906 * 109.47047 * 299.99836 * 16 15 14 20 20 C 1.38705 * 119.89138 * 359.97438 * 14 13 12 21 21 C 1.38173 * 119.93997 * 359.74523 * 20 14 13 22 22 C 1.38241 * 120.05599 * 0.53472 * 21 20 14 23 23 C 1.53776 * 87.17456 * 25.36071 * 10 9 7 24 24 N 1.37648 * 107.53340 * 180.22578 * 3 2 1 25 25 C 1.35541 * 108.64173 * 359.56554 * 24 3 2 26 26 C 1.50705 * 125.56041 * 180.13248 * 25 24 3 27 27 O 1.42898 * 109.47113 * 65.33141 * 26 25 24 28 28 Si 1.86302 * 109.46849 * 185.32873 * 26 25 24 29 29 C 1.35444 * 108.87235 * 0.43866 * 25 24 3 30 30 H 1.09003 * 109.47019 * 90.00721 * 1 2 3 31 31 H 1.09004 * 109.46828 * 209.99868 * 1 2 3 32 32 H 1.09000 * 109.47425 * 330.00226 * 1 2 3 33 33 H 0.96998 * 119.99713 * 359.97438 * 6 4 3 34 34 H 1.09003 * 113.66185 * 334.67287 * 9 7 6 35 35 H 1.08994 * 113.61710 * 203.71828 * 9 7 6 36 36 H 1.08007 * 120.02798 * 0.02562 * 13 12 10 37 37 H 1.08001 * 120.03309 * 180.02562 * 20 14 13 38 38 H 1.08001 * 119.97107 * 180.25234 * 21 20 14 39 39 H 1.08002 * 119.94762 * 179.72634 * 22 21 20 40 40 H 1.09004 * 113.61133 * 89.15317 * 23 10 9 41 41 H 1.08993 * 113.61963 * 220.06025 * 23 10 9 42 42 H 0.96995 * 125.68277 * 179.69723 * 24 3 2 43 43 H 1.09000 * 109.46984 * 305.32740 * 26 25 24 44 44 H 0.96694 * 113.99842 * 179.97438 * 27 26 25 45 45 H 1.48493 * 110.00177 * 178.68115 * 28 26 25 46 46 H 1.48494 * 110.00215 * 300.00203 * 28 26 25 47 47 H 1.08000 * 126.06794 * 179.76184 * 29 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3262 1.1090 0.0000 4 6 1.8897 2.5093 -0.0008 5 8 0.7025 2.7766 -0.0010 6 7 2.8034 3.5000 -0.0012 7 6 2.3675 4.8987 -0.0014 8 1 1.3640 5.0292 -0.4067 9 6 2.5885 5.6138 1.3439 10 6 3.9836 5.9944 0.8210 11 1 4.7515 5.2544 1.0468 12 6 4.4002 7.3978 1.1786 13 6 5.7070 7.6583 1.5420 14 6 6.0898 8.9506 1.8717 15 8 7.3750 9.2093 2.2301 16 6 7.6974 10.5625 2.5570 17 9 6.9143 10.9804 3.6383 18 9 9.0509 10.6496 2.8997 19 9 7.4428 11.3824 1.4523 20 6 5.1586 9.9779 1.8350 21 6 3.8539 9.7132 1.4652 22 6 3.4737 8.4238 1.1427 23 6 3.4032 5.8666 -0.5973 24 7 3.6283 0.6627 -0.0052 25 6 3.6218 -0.6927 0.0014 26 6 4.8435 -1.5750 0.0016 27 8 5.5629 -1.3921 1.2227 28 14 4.3224 -3.3571 -0.1511 29 6 2.3380 -1.1246 0.0009 30 1 -0.3633 -0.0001 -1.0277 31 1 -0.3633 -0.8900 0.5138 32 1 -0.3634 0.8900 0.5138 33 1 3.7497 3.2870 -0.0006 34 1 2.6121 4.9387 2.1995 35 1 1.9310 6.4696 1.4967 36 1 6.4304 6.8567 1.5695 37 1 5.4542 10.9847 2.0907 38 1 3.1294 10.5135 1.4324 39 1 2.4523 8.2181 0.8582 40 1 2.9688 6.7917 -0.9763 41 1 4.0836 5.3956 -1.3067 42 1 4.4189 1.2245 -0.0105 43 1 5.4832 -1.3101 -0.8402 44 1 6.3630 -1.9306 1.2922 45 1 5.5194 -4.2353 -0.1841 46 1 3.4497 -3.7308 0.9907 47 1 2.0138 -2.1548 0.0016 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10860230_13940406.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:53:27 Heat of formation + Delta-G solvation = -158.682179 kcal Electronic energy + Delta-G solvation = -36200.480507 eV Core-core repulsion = 30708.721031 eV Total energy + Delta-G solvation = -5491.759477 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 397.133 amu Computer time = 1.14 seconds Orbital eigenvalues (eV) -51.56956 -49.28801 -49.16703 -42.61215 -41.70995 -40.87561 -39.61424 -38.18473 -37.81014 -34.83863 -33.47589 -32.35912 -31.71777 -31.10603 -28.22939 -27.41022 -27.11167 -26.70937 -25.84046 -23.96313 -23.26857 -22.63241 -21.58031 -21.02815 -20.41642 -20.28805 -20.13048 -19.68334 -19.46256 -18.63199 -17.99626 -17.21225 -17.11314 -16.82926 -16.46546 -16.42053 -16.37125 -16.02624 -15.93053 -15.77475 -15.64345 -15.57427 -15.45999 -15.30257 -15.27986 -14.98523 -14.87889 -14.78528 -14.54577 -14.27907 -14.12210 -13.96000 -13.92373 -13.60208 -13.49826 -13.30571 -13.10333 -12.94419 -12.83959 -12.72695 -12.47498 -11.99227 -11.86324 -11.75079 -11.33171 -11.13584 -10.61918 -10.23389 -9.95460 -9.82731 -9.60770 -9.19107 -4.84344 0.07025 0.19698 0.28980 0.34967 1.21184 1.50941 1.65017 1.70881 1.92588 2.00450 2.18874 2.24171 2.46746 2.64436 2.86827 3.26245 3.39260 3.54488 3.58304 3.64877 3.77718 3.80394 3.85804 3.90731 4.02429 4.12943 4.15399 4.16612 4.23647 4.38257 4.41795 4.61619 4.70935 4.75769 4.79037 4.83390 4.84226 4.91626 4.93082 4.97490 5.00290 5.09321 5.17004 5.23337 5.32948 5.34361 5.43478 5.58034 5.65224 5.84548 5.85737 6.30039 6.46356 6.54064 7.06716 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.090 4.090 2 C -0.085 4.085 3 C -0.069 4.069 4 C 0.592 3.408 5 O -0.558 6.558 6 N -0.702 5.702 7 C 0.116 3.884 8 H 0.094 0.906 9 C -0.141 4.141 10 C -0.068 4.068 11 H 0.110 0.890 12 C -0.034 4.034 13 C -0.129 4.129 14 C 0.084 3.916 15 O -0.320 6.320 16 C 0.608 3.392 17 F -0.166 7.166 18 F -0.133 7.133 19 F -0.165 7.165 20 C -0.207 4.207 21 C -0.078 4.078 22 C -0.132 4.132 23 C -0.122 4.122 24 N -0.514 5.514 25 C 0.074 3.926 26 C -0.064 4.064 27 O -0.561 6.561 28 Si 0.785 3.215 29 C -0.211 4.211 30 H 0.073 0.927 31 H 0.075 0.925 32 H 0.061 0.939 33 H 0.408 0.592 34 H 0.065 0.935 35 H 0.105 0.895 36 H 0.147 0.853 37 H 0.132 0.868 38 H 0.153 0.847 39 H 0.152 0.848 40 H 0.109 0.891 41 H 0.088 0.912 42 H 0.428 0.572 43 H 0.107 0.893 44 H 0.401 0.599 45 H -0.279 1.279 46 H -0.300 1.300 47 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.677 -2.124 -4.353 5.534 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.147 4.147 2 C -0.094 4.094 3 C -0.182 4.182 4 C 0.381 3.619 5 O -0.437 6.437 6 N -0.353 5.353 7 C 0.011 3.989 8 H 0.113 0.887 9 C -0.180 4.180 10 C -0.086 4.086 11 H 0.129 0.871 12 C -0.035 4.035 13 C -0.147 4.147 14 C 0.042 3.958 15 O -0.240 6.240 16 C 0.517 3.483 17 F -0.148 7.148 18 F -0.114 7.114 19 F -0.147 7.147 20 C -0.226 4.226 21 C -0.096 4.096 22 C -0.150 4.150 23 C -0.159 4.159 24 N -0.111 5.111 25 C -0.045 4.045 26 C -0.173 4.173 27 O -0.372 6.372 28 Si 0.688 3.312 29 C -0.235 4.235 30 H 0.092 0.908 31 H 0.094 0.906 32 H 0.080 0.920 33 H 0.244 0.756 34 H 0.084 0.916 35 H 0.123 0.877 36 H 0.164 0.836 37 H 0.149 0.851 38 H 0.171 0.829 39 H 0.170 0.830 40 H 0.127 0.873 41 H 0.107 0.893 42 H 0.268 0.732 43 H 0.125 0.875 44 H 0.252 0.748 45 H -0.206 1.206 46 H -0.227 1.227 47 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges 1.667 -2.216 -3.868 4.759 hybrid contribution 2.102 0.944 1.156 2.578 sum 3.769 -1.272 -2.712 4.814 Atomic orbital electron populations 1.20340 0.88987 1.02725 1.02635 1.20159 0.96418 0.91157 1.01667 1.20127 0.84338 0.93205 1.20574 1.17117 0.85627 0.83515 0.75644 1.90820 1.17475 1.83647 1.51728 1.45436 1.09490 1.05342 1.75022 1.21932 0.99795 0.79529 0.97656 0.88738 1.23613 0.96254 1.00892 0.97213 1.21639 0.97420 0.92319 0.97210 0.87146 1.19664 0.91517 0.96058 0.96220 1.20510 0.97442 0.93469 1.03321 1.18953 0.80204 0.96079 1.00521 1.86399 1.30062 1.24622 1.82946 1.19271 0.75571 0.78384 0.75065 1.93305 1.74820 1.90219 1.56419 1.93319 1.30769 1.95354 1.91952 1.93307 1.93821 1.73435 1.54121 1.21692 0.95604 0.98529 1.06754 1.21261 0.94707 0.98090 0.95574 1.21378 1.00947 0.91913 1.00772 1.23397 0.97217 0.99774 0.95552 1.41772 1.06909 1.06595 1.55832 1.20118 0.95542 0.82891 1.05939 1.24707 0.92800 1.09895 0.89881 1.86533 1.43240 1.68904 1.38475 0.93445 0.79998 0.70370 0.87368 1.20779 0.90984 0.99549 1.12169 0.90807 0.90613 0.91986 0.75617 0.91629 0.87663 0.83570 0.85058 0.82943 0.83047 0.87260 0.89299 0.73241 0.87513 0.74772 1.20590 1.22747 0.82120 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.47 9.83 71.23 0.70 0.23 16 2 C -0.09 -0.49 6.21 -19.56 -0.12 -0.61 16 3 C -0.07 -0.29 7.06 40.35 0.28 0.00 16 4 C 0.59 3.10 7.79 86.45 0.67 3.77 16 5 O -0.56 -6.99 14.40 -4.34 -0.06 -7.05 16 6 N -0.70 1.72 5.26 -443.72 -2.33 -0.62 16 7 C 0.12 -0.38 4.33 45.58 0.20 -0.18 16 8 H 0.09 0.06 7.46 -2.38 -0.02 0.04 16 9 C -0.14 0.61 7.27 31.18 0.23 0.83 16 10 C -0.07 0.45 3.85 -11.02 -0.04 0.41 16 11 H 0.11 -0.96 8.09 -2.38 -0.02 -0.98 16 12 C -0.03 0.11 5.29 -19.88 -0.11 0.01 16 13 C -0.13 0.05 9.65 22.36 0.22 0.26 16 14 C 0.08 0.24 6.48 22.50 0.15 0.39 16 15 O -0.32 -1.38 10.37 -92.48 -0.96 -2.34 16 16 C 0.61 1.89 3.42 113.37 0.39 2.28 16 17 F -0.17 -0.55 15.56 44.97 0.70 0.15 16 18 F -0.13 -0.46 17.53 44.97 0.79 0.33 16 19 F -0.16 -0.49 15.56 44.97 0.70 0.20 16 20 C -0.21 -0.31 8.26 22.37 0.18 -0.12 16 21 C -0.08 0.16 10.04 22.25 0.22 0.39 16 22 C -0.13 0.50 8.53 22.28 0.19 0.69 16 23 C -0.12 0.93 7.29 31.12 0.23 1.16 16 24 N -0.51 0.65 5.99 -171.93 -1.03 -0.38 16 25 C 0.07 0.00 6.50 41.34 0.27 0.27 16 26 C -0.06 0.31 3.07 71.24 0.22 0.53 16 27 O -0.56 1.36 12.86 -148.98 -1.92 -0.55 16 28 Si 0.78 -3.72 30.56 68.60 2.10 -1.62 16 29 C -0.21 -0.51 9.27 22.01 0.20 -0.31 16 30 H 0.07 0.30 8.14 -2.39 -0.02 0.28 16 31 H 0.08 0.18 8.14 -2.38 -0.02 0.16 16 32 H 0.06 0.58 6.49 -2.39 -0.02 0.56 16 33 H 0.41 -3.33 7.83 -92.71 -0.73 -4.05 16 34 H 0.06 -0.09 8.14 -2.39 -0.02 -0.11 16 35 H 0.11 -0.58 6.39 -2.39 -0.02 -0.60 16 36 H 0.15 -0.46 8.05 -2.91 -0.02 -0.49 16 37 H 0.13 0.14 5.10 -2.91 -0.01 0.13 16 38 H 0.15 -0.96 8.06 -2.91 -0.02 -0.99 16 39 H 0.15 -1.20 6.72 -2.91 -0.02 -1.22 16 40 H 0.11 -0.92 7.64 -2.39 -0.02 -0.94 16 41 H 0.09 -0.80 8.14 -2.39 -0.02 -0.82 16 42 H 0.43 -3.13 8.19 -92.71 -0.76 -3.89 16 43 H 0.11 -1.09 7.96 -2.39 -0.02 -1.11 16 44 H 0.40 -4.17 8.74 -74.06 -0.65 -4.81 16 45 H -0.28 0.38 7.11 99.48 0.71 1.09 16 46 H -0.30 -1.12 7.11 99.48 0.71 -0.42 16 47 H 0.16 -0.15 6.19 -2.91 -0.02 -0.17 16 Total: 0.00 -21.33 401.91 1.06 -20.27 By element: Atomic # 1 Polarization: -17.36 SS G_CDS: -1.00 Total: -18.36 kcal Atomic # 6 Polarization: 5.89 SS G_CDS: 4.08 Total: 9.97 kcal Atomic # 7 Polarization: 2.37 SS G_CDS: -3.36 Total: -1.00 kcal Atomic # 8 Polarization: -7.00 SS G_CDS: -2.94 Total: -9.94 kcal Atomic # 9 Polarization: -1.50 SS G_CDS: 2.19 Total: 0.68 kcal Atomic # 14 Polarization: -3.72 SS G_CDS: 2.10 Total: -1.62 kcal Total: -21.33 1.06 -20.27 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10860230_13940406.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -138.414 kcal (2) G-P(sol) polarization free energy of solvation -21.329 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -159.743 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.061 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.268 kcal (6) G-S(sol) free energy of system = (1) + (5) -158.682 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.15 seconds