Wall clock time and date at job start Sat Mar 6 2021 13:53:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86300 * 109.47466 * 2 1 4 4 C 1.50703 * 109.47242 * 120.00169 * 2 1 3 5 5 C 1.34495 * 125.49186 * 210.03901 * 4 2 1 6 6 C 1.46758 * 106.36097 * 179.97438 * 5 4 2 7 7 C 1.47259 * 126.96942 * 180.02562 * 6 5 4 8 8 O 1.21623 * 120.00314 * 180.02562 * 7 6 5 9 9 N 1.34780 * 119.99645 * 0.02562 * 7 6 5 10 10 C 1.46505 * 119.99714 * 180.02562 * 9 7 6 11 11 H 1.08992 * 112.85109 * 23.80141 * 10 9 7 12 12 C 1.53778 * 113.61183 * 155.00523 * 10 9 7 13 13 C 1.53780 * 87.08373 * 89.11512 * 12 10 9 14 14 H 1.08999 * 113.61216 * 270.79194 * 13 12 10 15 15 C 1.50700 * 113.61231 * 139.98025 * 13 12 10 16 16 C 1.38246 * 119.97337 * 299.99591 * 15 13 12 17 17 C 1.38284 * 120.10847 * 179.97438 * 16 15 13 18 18 C 1.38118 * 120.06175 * 0.04517 * 17 16 15 19 19 C 1.38754 * 119.94038 * 359.97438 * 18 17 16 20 20 O 1.35910 * 120.05510 * 180.02562 * 19 18 17 21 21 C 1.42897 * 116.99748 * 359.97438 * 20 19 18 22 22 F 1.39898 * 109.47137 * 60.00384 * 21 20 19 23 23 F 1.39899 * 109.47075 * 180.02562 * 21 20 19 24 24 F 1.39902 * 109.47201 * 300.00329 * 21 20 19 25 25 C 1.38168 * 119.97109 * 119.72403 * 15 13 12 26 26 C 1.53781 * 87.08173 * 25.43225 * 13 12 10 27 27 C 1.36339 * 106.05977 * 359.97438 * 6 5 4 28 28 C 1.50998 * 126.78725 * 180.02562 * 27 6 5 29 29 C 1.53397 * 108.25236 * 164.27482 * 28 27 6 30 30 C 1.53158 * 109.04043 * 48.46563 * 29 28 27 31 31 C 1.53127 * 109.52329 * 290.42124 * 30 29 28 32 32 N 1.35205 * 108.66189 * 0.02562 * 27 6 5 33 33 H 0.96696 * 113.99666 * 299.99846 * 1 2 3 34 34 H 1.09005 * 109.47244 * 240.00064 * 2 1 3 35 35 H 1.48498 * 109.99921 * 300.00676 * 3 2 1 36 36 H 1.48508 * 109.99566 * 61.31779 * 3 2 1 37 37 H 1.07996 * 126.81992 * 359.93146 * 5 4 2 38 38 H 0.96995 * 120.00285 * 0.02562 * 9 7 6 39 39 H 1.09008 * 113.61343 * 203.66505 * 12 10 9 40 40 H 1.09003 * 113.61492 * 334.47481 * 12 10 9 41 41 H 1.07997 * 119.94245 * 359.97438 * 16 15 13 42 42 H 1.08007 * 119.97093 * 180.02562 * 17 16 15 43 43 H 1.07997 * 120.03115 * 180.02562 * 18 17 16 44 44 H 1.08002 * 120.02878 * 0.02562 * 25 15 13 45 45 H 1.08996 * 113.60888 * 220.02334 * 26 13 12 46 46 H 1.08993 * 113.61472 * 89.12077 * 26 13 12 47 47 H 1.09005 * 109.70656 * 44.58868 * 28 27 6 48 48 H 1.08999 * 109.71032 * 283.96782 * 28 27 6 49 49 H 1.08997 * 109.53813 * 168.32998 * 29 28 27 50 50 H 1.08996 * 109.54525 * 288.50607 * 29 28 27 51 51 H 1.08990 * 109.46599 * 50.44515 * 30 29 28 52 52 H 1.09002 * 109.45629 * 170.41230 * 30 29 28 53 53 H 1.09000 * 109.56563 * 170.83431 * 31 30 29 54 54 H 1.08993 * 109.57142 * 291.17812 * 31 30 29 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 1.2305 5 6 3.0854 -0.4458 1.8684 6 6 3.1548 -1.3770 3.0007 7 6 4.2322 -1.4781 3.9994 8 8 4.1596 -2.3021 4.8910 9 7 5.2988 -0.6574 3.9254 10 6 6.3709 -0.7584 4.9187 11 1 6.4207 -1.7401 5.3895 12 6 7.7303 -0.2486 4.4117 13 6 7.3127 1.1395 4.9252 14 1 6.7739 1.7340 4.1875 15 6 8.4332 1.9011 5.5851 16 6 9.0624 1.3770 6.6990 17 6 10.0912 2.0733 7.3064 18 6 10.4922 3.2949 6.8020 19 6 9.8620 3.8233 5.6845 20 8 10.2550 5.0250 5.1859 21 6 11.3234 5.6901 5.8628 22 9 12.4651 4.8819 5.8394 23 9 11.5973 6.9035 5.2227 24 9 10.9534 5.9363 7.1894 25 6 8.8346 3.1200 5.0731 26 6 6.3952 0.4088 5.9198 27 6 2.0188 -2.1286 2.9410 28 6 1.6147 -3.2332 3.8879 29 6 0.1217 -3.5195 3.6828 30 6 -0.1570 -3.6697 2.1843 31 6 -0.0058 -2.3098 1.4969 32 7 1.2884 -1.7250 1.8772 33 1 -0.3932 0.4417 0.7650 34 1 1.7923 -0.5138 -0.8900 35 1 1.5615 2.4679 -1.2084 36 1 1.5879 2.4585 1.2243 37 1 3.8163 0.3027 1.6003 38 1 5.3565 0.0000 3.2146 39 1 8.5818 -0.6730 4.9436 40 1 7.8396 -0.3002 3.3284 41 1 8.7499 0.4223 7.0953 42 1 10.5815 1.6615 8.1762 43 1 11.2960 3.8381 7.2766 44 1 8.3454 3.5272 4.2005 45 1 5.4261 0.8893 6.0537 46 1 6.8816 0.1642 6.8640 47 1 1.7906 -2.9183 4.9165 48 1 2.1940 -4.1313 3.6736 49 1 -0.1467 -4.4419 4.1978 50 1 -0.4663 -2.6939 4.0834 51 1 0.5516 -4.3760 1.7520 52 1 -1.1722 -4.0392 2.0390 53 1 -0.0426 -2.4413 0.4154 54 1 -0.8127 -1.6490 1.8134 There are 80 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 80 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10860230_16915396.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:53:45 Heat of formation + Delta-G solvation = -160.483026 kcal Electronic energy + Delta-G solvation = -42573.248750 eV Core-core repulsion = 36642.109804 eV Total energy + Delta-G solvation = -5931.138946 eV No. of doubly occupied orbitals = 80 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 437.165 amu Computer time = 1.52 seconds Orbital eigenvalues (eV) -51.52088 -49.23950 -49.11886 -42.77551 -41.64935 -40.80960 -39.50808 -38.14361 -37.97221 -36.86963 -34.36831 -33.47142 -32.15705 -31.24108 -31.10338 -29.41381 -27.23874 -26.74551 -26.58331 -26.00511 -24.63050 -24.11848 -23.79089 -22.85030 -21.70383 -21.22624 -20.90686 -20.23811 -20.10675 -19.73162 -19.45146 -18.92443 -17.94363 -17.32943 -17.09896 -17.02997 -16.85497 -16.53843 -16.33632 -16.32159 -15.95565 -15.88048 -15.81744 -15.61372 -15.56737 -15.51857 -15.33092 -15.29784 -15.22920 -15.20582 -15.15315 -14.92152 -14.65388 -14.61088 -14.43549 -14.29441 -14.07537 -13.88376 -13.79494 -13.39447 -13.18389 -12.85554 -12.77957 -12.69789 -12.62189 -12.39717 -12.16697 -12.01398 -11.85086 -11.76084 -11.74333 -11.61195 -11.19835 -10.88926 -10.85851 -10.01079 -9.87521 -9.56149 -9.51351 -9.02523 -4.89924 0.14145 0.26934 0.40636 0.74435 1.07754 1.46233 1.69081 1.76270 1.79588 2.05022 2.43305 2.53123 2.57843 2.69730 2.92138 3.22681 3.48385 3.52360 3.57644 3.63792 3.66061 3.68766 3.78266 3.81210 3.82044 3.94242 4.01311 4.11287 4.19295 4.24416 4.30228 4.34758 4.35808 4.40080 4.47317 4.53572 4.63852 4.73174 4.77116 4.78508 4.82456 4.86164 4.91843 4.93207 4.99166 5.01244 5.04217 5.06904 5.12182 5.17412 5.20022 5.26948 5.32223 5.39863 5.57632 5.74393 5.77818 5.92734 6.04797 6.22798 6.36371 6.73856 7.42126 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.545 6.545 2 C -0.056 4.056 3 Si 0.801 3.199 4 C -0.019 4.019 5 C -0.159 4.159 6 C -0.255 4.255 7 C 0.592 3.408 8 O -0.589 6.589 9 N -0.697 5.697 10 C 0.117 3.883 11 H 0.085 0.915 12 C -0.123 4.123 13 C -0.066 4.066 14 H 0.117 0.883 15 C -0.033 4.033 16 C -0.134 4.134 17 C -0.080 4.080 18 C -0.208 4.208 19 C 0.084 3.916 20 O -0.319 6.319 21 C 0.607 3.393 22 F -0.165 7.165 23 F -0.133 7.133 24 F -0.166 7.166 25 C -0.126 4.126 26 C -0.142 4.142 27 C 0.102 3.898 28 C -0.054 4.054 29 C -0.124 4.124 30 C -0.135 4.135 31 C 0.105 3.895 32 N -0.429 5.429 33 H 0.384 0.616 34 H 0.130 0.870 35 H -0.298 1.298 36 H -0.291 1.291 37 H 0.185 0.815 38 H 0.414 0.586 39 H 0.103 0.897 40 H 0.091 0.909 41 H 0.149 0.851 42 H 0.150 0.850 43 H 0.130 0.870 44 H 0.151 0.849 45 H 0.066 0.934 46 H 0.100 0.900 47 H 0.081 0.919 48 H 0.080 0.920 49 H 0.088 0.912 50 H 0.067 0.933 51 H 0.068 0.932 52 H 0.106 0.894 53 H 0.098 0.902 54 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.027 -1.085 -2.689 3.076 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.353 6.353 2 C -0.164 4.164 3 Si 0.704 3.296 4 C -0.127 4.127 5 C -0.183 4.183 6 C -0.265 4.265 7 C 0.382 3.618 8 O -0.471 6.471 9 N -0.348 5.348 10 C 0.011 3.989 11 H 0.103 0.897 12 C -0.161 4.161 13 C -0.084 4.084 14 H 0.136 0.864 15 C -0.033 4.033 16 C -0.152 4.152 17 C -0.098 4.098 18 C -0.227 4.227 19 C 0.042 3.958 20 O -0.239 6.239 21 C 0.517 3.483 22 F -0.147 7.147 23 F -0.114 7.114 24 F -0.148 7.148 25 C -0.145 4.145 26 C -0.181 4.181 27 C -0.017 4.017 28 C -0.091 4.091 29 C -0.161 4.161 30 C -0.172 4.172 31 C -0.015 4.015 32 N -0.105 5.105 33 H 0.234 0.766 34 H 0.148 0.852 35 H -0.226 1.226 36 H -0.218 1.218 37 H 0.202 0.798 38 H 0.252 0.748 39 H 0.122 0.878 40 H 0.109 0.891 41 H 0.167 0.833 42 H 0.168 0.832 43 H 0.148 0.852 44 H 0.169 0.831 45 H 0.084 0.916 46 H 0.118 0.882 47 H 0.099 0.901 48 H 0.098 0.902 49 H 0.107 0.893 50 H 0.086 0.914 51 H 0.087 0.913 52 H 0.125 0.875 53 H 0.116 0.884 54 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges -1.570 -1.142 -2.906 3.495 hybrid contribution -0.648 0.488 0.580 0.997 sum -2.218 -0.654 -2.327 3.280 Atomic orbital electron populations 1.86566 1.18318 1.80090 1.50309 1.25040 0.83340 1.11715 0.96294 0.93543 0.89865 0.69936 0.76216 1.20982 0.96355 0.95624 0.99761 1.22015 0.98365 1.02514 0.95369 1.19980 0.98076 1.06053 1.02398 1.17526 0.81457 0.79662 0.83111 1.90741 1.79720 1.38848 1.37766 1.45304 1.19842 1.38222 1.31428 1.21807 0.87389 0.99324 0.90337 0.89666 1.23385 0.95983 0.93710 1.02994 1.21651 0.93593 0.94890 0.98250 0.86449 1.19698 0.96115 0.92759 0.94731 1.21373 0.96319 1.01425 0.96053 1.21233 0.96096 0.92831 0.99655 1.21668 1.03248 1.00028 0.97751 1.18964 0.97720 0.83447 0.95664 1.86401 1.49181 1.34179 1.54132 1.19277 0.77353 0.76775 0.74911 1.93304 1.52109 1.73390 1.95935 1.93317 1.92909 1.42885 1.82303 1.93304 1.91180 1.94295 1.36057 1.20541 0.96694 0.95042 1.02202 1.23575 0.99954 0.96317 0.98216 1.20564 0.91901 0.98256 0.90944 1.20431 0.96802 0.94664 0.97238 1.21693 0.94579 1.03411 0.96465 1.21924 1.04554 0.95476 0.95254 1.22244 0.82192 0.95442 1.01621 1.44031 1.17960 1.27286 1.21266 0.76646 0.85227 1.22582 1.21766 0.79804 0.74828 0.87836 0.89069 0.83310 0.83190 0.85184 0.83136 0.91553 0.88174 0.90071 0.90199 0.89327 0.91394 0.91284 0.87519 0.88418 0.88985 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.19 10.68 -148.98 -1.59 -0.40 16 2 C -0.06 0.22 2.99 71.24 0.21 0.44 16 3 Si 0.80 -4.26 31.11 68.60 2.13 -2.13 16 4 C -0.02 0.02 6.15 40.99 0.25 0.27 16 5 C -0.16 0.29 9.09 23.64 0.21 0.50 16 6 C -0.26 -1.11 6.28 -19.12 -0.12 -1.23 16 7 C 0.59 3.77 7.81 86.61 0.68 4.44 16 8 O -0.59 -8.15 14.93 -4.11 -0.06 -8.21 16 9 N -0.70 0.85 5.26 -443.45 -2.33 -1.49 16 10 C 0.12 -0.24 4.32 45.52 0.20 -0.05 16 11 H 0.09 0.22 7.46 -2.39 -0.02 0.20 16 12 C -0.12 0.83 7.29 31.12 0.23 1.06 16 13 C -0.07 0.42 3.86 -11.01 -0.04 0.38 16 14 H 0.12 -1.08 8.09 -2.39 -0.02 -1.10 16 15 C -0.03 0.10 5.29 -19.88 -0.11 0.00 16 16 C -0.13 0.43 8.61 22.28 0.19 0.62 16 17 C -0.08 0.12 10.04 22.25 0.22 0.35 16 18 C -0.21 -0.36 8.26 22.36 0.18 -0.18 16 19 C 0.08 0.24 6.48 22.51 0.15 0.38 16 20 O -0.32 -1.32 10.37 -92.53 -0.96 -2.28 16 21 C 0.61 1.88 3.42 113.37 0.39 2.27 16 22 F -0.17 -0.52 15.56 44.97 0.70 0.18 16 23 F -0.13 -0.45 17.53 44.97 0.79 0.33 16 24 F -0.17 -0.56 15.56 44.97 0.70 0.14 16 25 C -0.13 0.08 9.65 22.37 0.22 0.30 16 26 C -0.14 0.52 7.25 31.12 0.23 0.74 16 27 C 0.10 0.46 6.57 41.69 0.27 0.74 16 28 C -0.05 -0.19 5.32 30.08 0.16 -0.03 16 29 C -0.12 0.24 5.98 30.78 0.18 0.42 16 30 C -0.13 0.56 5.92 30.69 0.18 0.74 16 31 C 0.10 -0.32 5.32 86.32 0.46 0.14 16 32 N -0.43 -0.40 3.11 -493.61 -1.54 -1.93 16 33 H 0.38 -2.43 8.63 -74.06 -0.64 -3.07 16 34 H 0.13 -0.74 7.96 -2.38 -0.02 -0.76 16 35 H -0.30 -0.61 7.11 99.48 0.71 0.09 16 36 H -0.29 -0.16 7.11 99.48 0.71 0.54 16 37 H 0.18 -1.81 6.52 -2.91 -0.02 -1.83 16 38 H 0.41 -2.99 7.83 -92.71 -0.73 -3.72 16 39 H 0.10 -0.75 7.72 -2.38 -0.02 -0.77 16 40 H 0.09 -0.76 8.14 -2.39 -0.02 -0.78 16 41 H 0.15 -1.03 6.65 -2.91 -0.02 -1.05 16 42 H 0.15 -0.84 8.06 -2.91 -0.02 -0.86 16 43 H 0.13 0.18 5.10 -2.91 -0.01 0.17 16 44 H 0.15 -0.60 8.05 -2.91 -0.02 -0.63 16 45 H 0.07 -0.07 8.14 -2.39 -0.02 -0.09 16 46 H 0.10 -0.46 6.31 -2.39 -0.02 -0.47 16 47 H 0.08 0.58 7.40 -2.38 -0.02 0.56 16 48 H 0.08 0.37 8.14 -2.39 -0.02 0.35 16 49 H 0.09 -0.33 8.14 -2.39 -0.02 -0.35 16 50 H 0.07 -0.12 8.12 -2.39 -0.02 -0.14 16 51 H 0.07 -0.17 8.11 -2.39 -0.02 -0.19 16 52 H 0.11 -0.82 8.14 -2.39 -0.02 -0.83 16 53 H 0.10 -0.30 7.69 -2.39 -0.02 -0.32 16 54 H 0.09 -0.47 7.94 -2.39 -0.02 -0.49 16 Total: 0.00 -20.83 442.60 1.86 -18.98 By element: Atomic # 1 Polarization: -15.18 SS G_CDS: -0.33 Total: -15.51 kcal Atomic # 6 Polarization: 7.96 SS G_CDS: 4.35 Total: 12.31 kcal Atomic # 7 Polarization: 0.45 SS G_CDS: -3.87 Total: -3.42 kcal Atomic # 8 Polarization: -8.27 SS G_CDS: -2.61 Total: -10.88 kcal Atomic # 9 Polarization: -1.53 SS G_CDS: 2.19 Total: 0.66 kcal Atomic # 14 Polarization: -4.26 SS G_CDS: 2.13 Total: -2.13 kcal Total: -20.83 1.86 -18.98 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10860230_16915396.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -141.508 kcal (2) G-P(sol) polarization free energy of solvation -20.832 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -162.340 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.857 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.975 kcal (6) G-S(sol) free energy of system = (1) + (5) -160.483 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.52 seconds