Wall clock time and date at job start Sat Mar 6 2021 13:55:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.33811 * 122.44530 * 2 1 4 4 C 1.50698 * 124.52876 * 0.02562 * 3 2 1 5 5 O 1.42903 * 109.47207 * 246.54385 * 4 3 2 6 6 Si 1.86291 * 109.47397 * 126.53877 * 4 3 2 7 7 S 1.70625 * 110.95317 * 179.77817 * 3 2 1 8 8 C 1.75836 * 91.55898 * 0.30782 * 7 3 2 9 9 C 1.46590 * 125.45269 * 179.97438 * 8 7 3 10 10 O 1.21699 * 119.99738 * 179.69061 * 9 8 7 11 11 N 1.34775 * 120.00167 * 359.68575 * 9 8 7 12 12 C 1.46501 * 119.99920 * 180.02562 * 11 9 8 13 13 H 1.09002 * 112.84441 * 336.19258 * 12 11 9 14 14 C 1.53781 * 113.69112 * 107.46173 * 12 11 9 15 15 C 1.53786 * 87.07801 * 89.13031 * 14 12 11 16 16 H 1.09002 * 113.61010 * 270.88045 * 15 14 12 17 17 C 1.50693 * 113.61461 * 139.98412 * 15 14 12 18 18 C 1.38123 * 119.97598 * 142.50331 * 17 15 14 19 19 C 1.38751 * 119.94443 * 179.97438 * 18 17 15 20 20 O 1.35906 * 120.05452 * 180.02562 * 19 18 17 21 21 C 1.42898 * 117.00242 * 179.97438 * 20 19 18 22 22 F 1.39902 * 109.46905 * 60.00261 * 21 20 19 23 23 F 1.39892 * 109.47152 * 180.02562 * 21 20 19 24 24 F 1.39899 * 109.47082 * 300.00694 * 21 20 19 25 25 C 1.38707 * 119.89232 * 359.97438 * 19 18 17 26 26 C 1.38169 * 119.94472 * 0.02562 * 25 19 18 27 27 C 1.38248 * 120.05395 * 359.72357 * 26 25 19 28 28 C 1.53775 * 113.61556 * 205.00303 * 12 11 9 29 29 C 1.36644 * 109.08468 * 359.69389 * 8 7 3 30 30 H 1.08994 * 109.47590 * 274.96324 * 1 2 3 31 31 H 1.09000 * 109.47389 * 34.97102 * 1 2 3 32 32 H 1.09009 * 109.46686 * 154.96573 * 1 2 3 33 33 H 1.09005 * 109.46960 * 6.53889 * 4 3 2 34 34 H 0.96696 * 114.00090 * 180.02562 * 5 4 3 35 35 H 1.48503 * 110.00102 * 298.68438 * 6 4 3 36 36 H 1.48499 * 110.00058 * 60.00375 * 6 4 3 37 37 H 0.96996 * 120.00247 * 0.02562 * 11 9 8 38 38 H 1.08991 * 113.61434 * 334.57837 * 14 12 11 39 39 H 1.09002 * 113.61205 * 203.67157 * 14 12 11 40 40 H 1.08000 * 120.02473 * 359.96854 * 18 17 15 41 41 H 1.08000 * 120.02882 * 179.97438 * 25 19 18 42 42 H 1.07989 * 119.97471 * 180.02562 * 26 25 19 43 43 H 1.07991 * 119.94668 * 180.29656 * 27 26 25 44 44 H 1.08993 * 113.61779 * 156.25306 * 28 12 11 45 45 H 1.09005 * 113.69343 * 25.35393 * 28 12 11 46 46 H 1.07997 * 123.35080 * 180.25677 * 29 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2249 1.1292 0.0000 4 6 1.6355 2.5161 0.0006 5 8 1.9422 3.1646 -1.2354 6 14 2.3554 3.4964 1.4117 7 16 3.8969 0.7893 0.0062 8 6 3.5936 -0.9427 -0.0007 9 6 4.6232 -1.9862 -0.0001 10 8 4.3003 -3.1596 0.0005 11 7 5.9274 -1.6462 -0.0003 12 6 6.9562 -2.6891 -0.0002 13 1 6.5992 -3.6357 0.4054 14 6 7.6908 -2.8324 -1.3436 15 6 8.6833 -1.7790 -0.8235 16 1 8.3904 -0.7538 -1.0501 17 6 10.1174 -2.0720 -1.1818 18 6 10.9706 -1.0381 -1.5147 19 6 12.2911 -1.3086 -1.8439 20 8 13.1327 -0.2930 -2.1713 21 6 14.4783 -0.6454 -2.4986 22 9 14.4799 -1.5053 -3.6021 23 9 15.2014 0.5117 -2.8076 24 9 15.0711 -1.2875 -1.4062 25 6 12.7511 -2.6172 -1.8373 26 6 11.8937 -3.6479 -1.5036 27 6 10.5798 -3.3754 -1.1709 28 6 8.2980 -2.2307 0.5951 29 6 2.2446 -1.1600 -0.0003 30 1 -0.3634 0.0889 1.0237 31 1 -0.3634 0.8421 -0.5890 32 1 -0.3633 -0.9312 -0.4349 33 1 0.5537 2.4511 0.1180 34 1 1.5935 4.0638 -1.3049 35 1 2.0162 2.8495 2.7046 36 1 3.8298 3.5924 1.2632 37 1 6.1848 -0.7110 -0.0004 38 1 7.1056 -2.4960 -2.1993 39 1 8.1369 -3.8154 -1.4946 40 1 10.6102 -0.0201 -1.5188 41 1 13.7784 -2.8302 -2.0936 42 1 12.2514 -4.6669 -1.4979 43 1 9.9124 -4.1819 -0.9057 44 1 8.9099 -3.0492 0.9739 45 1 8.2043 -1.4086 1.3047 46 1 1.8019 -2.1451 0.0001 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10860230_6739946.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:55:48 Heat of formation + Delta-G solvation = -169.774073 kcal Electronic energy + Delta-G solvation = -35709.113324 eV Core-core repulsion = 30243.224883 eV Total energy + Delta-G solvation = -5465.888440 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 414.095 amu Computer time = 1.12 seconds Orbital eigenvalues (eV) -51.56856 -49.28681 -49.16469 -41.87185 -41.18232 -40.22340 -39.49631 -38.21306 -37.49176 -34.77939 -32.72409 -32.13172 -31.23001 -29.98655 -27.47727 -27.13403 -26.75244 -25.81906 -24.36162 -23.92476 -23.03299 -22.12466 -21.12109 -20.28670 -20.19798 -20.02005 -19.74114 -19.32291 -18.44294 -18.00250 -17.50984 -17.22850 -17.14062 -16.52556 -16.42183 -16.35929 -16.04225 -15.91896 -15.83447 -15.79034 -15.64026 -15.57158 -15.31927 -15.29589 -15.27252 -14.94920 -14.75827 -14.55323 -14.38379 -14.29025 -14.24245 -13.99173 -13.55236 -13.37397 -13.16854 -13.09444 -12.95054 -12.86416 -12.75995 -12.64948 -12.32803 -11.91545 -11.88650 -11.80110 -11.42548 -11.35075 -10.61469 -10.33230 -9.96462 -9.86349 -9.61655 -9.56385 -5.11753 -0.81840 0.06274 0.19162 0.19619 0.35080 0.61446 1.00457 1.25035 1.58250 1.70804 1.83277 1.90181 1.92014 2.45878 2.64672 2.86915 3.22441 3.34005 3.51566 3.51975 3.57805 3.63405 3.81178 3.82361 3.86856 3.98107 4.00790 4.15237 4.15517 4.21537 4.34436 4.36782 4.45007 4.53971 4.65466 4.71896 4.75399 4.78893 4.81262 4.88234 4.91506 4.95147 4.97971 5.04252 5.19348 5.22261 5.30564 5.32161 5.37697 5.54943 5.85049 6.18925 6.82981 6.87772 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.099 4.099 2 C -0.107 4.107 3 C -0.203 4.203 4 C -0.046 4.046 5 O -0.560 6.560 6 Si 0.759 3.241 7 S 0.220 5.780 8 C -0.285 4.285 9 C 0.595 3.405 10 O -0.563 6.563 11 N -0.699 5.699 12 C 0.112 3.888 13 H 0.097 0.903 14 C -0.139 4.139 15 C -0.070 4.070 16 H 0.109 0.891 17 C -0.034 4.034 18 C -0.129 4.129 19 C 0.085 3.915 20 O -0.320 6.320 21 C 0.608 3.392 22 F -0.165 7.165 23 F -0.132 7.132 24 F -0.165 7.165 25 C -0.206 4.206 26 C -0.078 4.078 27 C -0.132 4.132 28 C -0.123 4.123 29 C -0.054 4.054 30 H 0.085 0.915 31 H 0.083 0.917 32 H 0.077 0.923 33 H 0.111 0.889 34 H 0.408 0.592 35 H -0.288 1.288 36 H -0.276 1.276 37 H 0.408 0.592 38 H 0.067 0.933 39 H 0.110 0.890 40 H 0.146 0.854 41 H 0.133 0.867 42 H 0.154 0.846 43 H 0.152 0.848 44 H 0.113 0.887 45 H 0.086 0.914 46 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.716 4.874 1.748 6.374 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.158 4.158 2 C -0.120 4.120 3 C -0.322 4.322 4 C -0.157 4.157 5 O -0.371 6.371 6 Si 0.662 3.338 7 S 0.489 5.511 8 C -0.405 4.405 9 C 0.382 3.618 10 O -0.443 6.443 11 N -0.350 5.350 12 C 0.007 3.993 13 H 0.115 0.885 14 C -0.178 4.178 15 C -0.088 4.088 16 H 0.127 0.873 17 C -0.034 4.034 18 C -0.148 4.148 19 C 0.043 3.957 20 O -0.240 6.240 21 C 0.517 3.483 22 F -0.147 7.147 23 F -0.114 7.114 24 F -0.147 7.147 25 C -0.225 4.225 26 C -0.096 4.096 27 C -0.150 4.150 28 C -0.161 4.161 29 C -0.087 4.087 30 H 0.104 0.896 31 H 0.102 0.898 32 H 0.096 0.904 33 H 0.128 0.872 34 H 0.261 0.739 35 H -0.215 1.215 36 H -0.202 1.202 37 H 0.244 0.756 38 H 0.086 0.914 39 H 0.128 0.872 40 H 0.164 0.836 41 H 0.150 0.850 42 H 0.171 0.829 43 H 0.170 0.830 44 H 0.131 0.869 45 H 0.105 0.895 46 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges -1.734 4.590 2.298 5.418 hybrid contribution -0.603 -1.070 -0.490 1.323 sum -2.338 3.520 1.808 4.596 Atomic orbital electron populations 1.20690 0.87098 1.04314 1.03688 1.18960 0.99613 0.90209 1.03228 1.23672 0.98507 0.99752 1.10287 1.24293 1.04278 0.90396 0.96755 1.86462 1.80705 1.34635 1.35317 0.94513 0.79515 0.86360 0.73428 1.82916 1.04293 0.96584 1.67287 1.24640 0.98212 0.97870 1.19761 1.17062 0.82367 0.86978 0.75422 1.90825 1.82226 1.19591 1.51699 1.45491 1.04441 1.10616 1.74449 1.21987 0.87264 0.91791 0.98284 0.88506 1.23591 0.96671 1.00529 0.96975 1.21642 0.89389 1.00662 0.97084 0.87288 1.19618 0.94971 0.92438 0.96385 1.20502 0.89349 1.01511 1.03395 1.18936 0.90198 0.85799 1.00741 1.86400 1.18369 1.35738 1.83526 1.19266 0.79604 0.74357 0.75052 1.93306 1.96112 1.70570 1.54745 1.93317 1.75846 1.49465 1.92743 1.93305 1.84542 1.81786 1.55055 1.21695 1.02091 0.91888 1.06816 1.21260 0.93090 0.99622 0.95584 1.21380 0.96041 0.96870 1.00698 1.23421 0.93991 1.02963 0.95711 1.20865 0.91110 1.00528 0.96229 0.89637 0.89797 0.90393 0.87154 0.73930 1.21520 1.20175 0.75550 0.91377 0.87185 0.83642 0.84975 0.82854 0.82993 0.86852 0.89544 0.82554 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.27 9.48 71.24 0.68 0.95 16 2 C -0.11 -0.31 5.78 -21.05 -0.12 -0.43 16 3 C -0.20 -0.54 4.86 24.68 0.12 -0.42 16 4 C -0.05 0.15 2.76 71.24 0.20 0.35 16 5 O -0.56 1.88 12.86 -148.98 -1.92 -0.04 16 6 Si 0.76 -3.22 32.12 68.60 2.20 -1.01 16 7 S 0.22 0.64 20.82 -56.49 -1.18 -0.53 16 8 C -0.28 -1.79 6.45 24.08 0.16 -1.64 16 9 C 0.59 4.78 7.78 86.42 0.67 5.45 16 10 O -0.56 -8.51 16.44 -4.35 -0.07 -8.58 16 11 N -0.70 -0.95 5.26 -444.09 -2.34 -3.28 16 12 C 0.11 -0.11 4.32 45.52 0.20 0.09 16 13 H 0.10 0.23 7.46 -2.39 -0.02 0.21 16 14 C -0.14 0.41 7.26 31.12 0.23 0.63 16 15 C -0.07 0.33 3.86 -11.01 -0.04 0.29 16 16 H 0.11 -0.67 8.09 -2.39 -0.02 -0.68 16 17 C -0.03 0.07 5.29 -19.88 -0.11 -0.03 16 18 C -0.13 -0.09 9.65 22.37 0.22 0.12 16 19 C 0.08 0.31 6.48 22.50 0.15 0.45 16 20 O -0.32 -1.59 10.37 -92.49 -0.96 -2.55 16 21 C 0.61 2.17 3.42 113.37 0.39 2.56 16 22 F -0.17 -0.60 15.56 44.97 0.70 0.10 16 23 F -0.13 -0.52 17.53 44.97 0.79 0.27 16 24 F -0.16 -0.57 15.56 44.97 0.70 0.13 16 25 C -0.21 -0.41 8.26 22.37 0.18 -0.22 16 26 C -0.08 0.12 10.04 22.26 0.22 0.35 16 27 C -0.13 0.41 8.59 22.29 0.19 0.60 16 28 C -0.12 0.67 7.29 31.12 0.23 0.90 16 29 C -0.05 -0.31 9.78 21.71 0.21 -0.10 16 30 H 0.09 -0.41 8.14 -2.39 -0.02 -0.43 16 31 H 0.08 -0.40 6.98 -2.39 -0.02 -0.42 16 32 H 0.08 -0.26 8.10 -2.38 -0.02 -0.28 16 33 H 0.11 -0.85 6.24 -2.38 -0.01 -0.87 16 34 H 0.41 -5.72 8.74 -74.06 -0.65 -6.37 16 35 H -0.29 -0.68 7.11 99.48 0.71 0.03 16 36 H -0.28 -0.42 7.11 99.48 0.71 0.29 16 37 H 0.41 -1.10 7.82 -92.71 -0.72 -1.82 16 38 H 0.07 -0.02 8.14 -2.39 -0.02 -0.04 16 39 H 0.11 -0.54 6.32 -2.39 -0.02 -0.56 16 40 H 0.15 -0.26 8.05 -2.91 -0.02 -0.28 16 41 H 0.13 0.19 5.10 -2.91 -0.01 0.17 16 42 H 0.15 -0.92 8.06 -2.92 -0.02 -0.94 16 43 H 0.15 -1.11 6.67 -2.92 -0.02 -1.13 16 44 H 0.11 -0.80 7.71 -2.39 -0.02 -0.82 16 45 H 0.09 -0.54 8.14 -2.38 -0.02 -0.56 16 46 H 0.16 0.81 8.06 -2.91 -0.02 0.78 16 Total: 0.00 -20.80 409.95 1.45 -19.35 By element: Atomic # 1 Polarization: -13.50 SS G_CDS: -0.24 Total: -13.74 kcal Atomic # 6 Polarization: 6.13 SS G_CDS: 3.76 Total: 9.89 kcal Atomic # 7 Polarization: -0.95 SS G_CDS: -2.34 Total: -3.28 kcal Atomic # 8 Polarization: -8.22 SS G_CDS: -2.95 Total: -11.16 kcal Atomic # 9 Polarization: -1.69 SS G_CDS: 2.19 Total: 0.50 kcal Atomic # 14 Polarization: -3.22 SS G_CDS: 2.20 Total: -1.01 kcal Atomic # 16 Polarization: 0.64 SS G_CDS: -1.18 Total: -0.53 kcal Total: -20.80 1.45 -19.35 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10860230_6739946.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -150.427 kcal (2) G-P(sol) polarization free energy of solvation -20.799 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -171.226 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.452 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.347 kcal (6) G-S(sol) free energy of system = (1) + (5) -169.774 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds