Wall clock time and date at job start Sat Mar 6 2021 13:56:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 C 1.37936 * 120.07256 * 2 1 4 4 C 1.38377 * 120.14761 * 180.02562 * 3 2 1 5 5 C 1.50700 * 119.85816 * 179.97438 * 4 3 2 6 6 C 1.38347 * 120.29065 * 359.97438 * 4 3 2 7 7 C 1.50698 * 119.92487 * 179.97438 * 6 4 3 8 8 O 1.42892 * 109.47423 * 284.99673 * 7 6 4 9 9 Si 1.86303 * 109.46735 * 164.99916 * 7 6 4 10 10 C 1.37982 * 120.14348 * 359.74153 * 6 4 3 11 11 C 1.39557 * 119.85068 * 0.53295 * 10 6 4 12 12 C 1.47846 * 120.14209 * 179.74634 * 11 10 6 13 13 O 1.21554 * 119.99856 * 173.71444 * 12 11 10 14 14 N 1.34779 * 120.00012 * 353.43786 * 12 11 10 15 15 C 1.46495 * 120.00153 * 180.02562 * 14 12 11 16 16 H 1.09009 * 112.85002 * 23.79984 * 15 14 12 17 17 C 1.53777 * 113.61561 * 154.99784 * 15 14 12 18 18 C 1.53781 * 87.07956 * 89.11752 * 17 15 14 19 19 H 1.08998 * 113.61298 * 270.88271 * 18 17 15 20 20 C 1.50701 * 113.61223 * 140.06649 * 18 17 15 21 21 C 1.38123 * 119.97316 * 119.72350 * 20 18 17 22 22 C 1.38755 * 119.94639 * 179.78848 * 21 20 18 23 23 O 1.35895 * 120.05786 * 180.20656 * 22 21 20 24 24 C 1.42899 * 117.00012 * 180.30061 * 23 22 21 25 25 F 1.39901 * 109.47204 * 60.00005 * 24 23 22 26 26 F 1.39901 * 109.47250 * 180.02562 * 24 23 22 27 27 F 1.39900 * 109.47018 * 299.99900 * 24 23 22 28 28 C 1.38713 * 119.88605 * 0.50820 * 22 21 20 29 29 C 1.38173 * 119.94521 * 359.72404 * 28 22 21 30 30 C 1.38247 * 120.05295 * 0.02562 * 29 28 22 31 31 C 1.53779 * 113.61729 * 252.49985 * 15 14 12 32 32 H 1.09002 * 109.46701 * 263.47157 * 1 2 3 33 33 H 1.08991 * 109.47386 * 23.47871 * 1 2 3 34 34 H 1.09003 * 109.46990 * 143.48126 * 1 2 3 35 35 H 1.07998 * 119.92409 * 359.97438 * 3 2 1 36 36 H 1.08995 * 109.47092 * 89.99620 * 5 4 3 37 37 H 1.08996 * 109.47157 * 210.00225 * 5 4 3 38 38 H 1.08999 * 109.46464 * 329.99789 * 5 4 3 39 39 H 1.09005 * 109.46987 * 45.00272 * 7 6 4 40 40 H 0.96705 * 114.00311 * 300.00947 * 8 7 6 41 41 H 1.48498 * 110.00002 * 180.02562 * 9 7 6 42 42 H 1.48503 * 110.00261 * 301.31949 * 9 7 6 43 43 H 1.07999 * 120.07189 * 180.25427 * 10 6 4 44 44 H 0.96995 * 119.99992 * 359.97438 * 14 12 11 45 45 H 1.09008 * 113.61236 * 203.66656 * 17 15 14 46 46 H 1.08996 * 113.61783 * 334.56818 * 17 15 14 47 47 H 1.08004 * 120.02810 * 359.97438 * 21 20 18 48 48 H 1.08001 * 120.03194 * 179.70749 * 28 22 21 49 49 H 1.07997 * 119.97217 * 180.02562 * 29 28 22 50 50 H 1.07994 * 119.94156 * 179.97438 * 30 29 28 51 51 H 1.09000 * 113.61366 * 25.42691 * 31 15 14 52 52 H 1.08996 * 113.61761 * 156.33574 * 31 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1982 1.1937 0.0000 4 6 3.5820 1.1955 -0.0005 5 6 4.3306 2.5034 -0.0011 6 6 4.2814 0.0018 -0.0005 7 6 5.7883 0.0134 -0.0017 8 8 6.2610 0.3651 -1.3035 9 14 6.4226 -1.6782 0.4532 10 6 3.6021 -1.1992 0.0054 11 6 2.2066 -1.2080 0.0001 12 6 1.4723 -2.4912 0.0007 13 8 0.2618 -2.4987 0.1114 14 7 2.1445 -3.6524 -0.1270 15 6 1.4168 -4.9239 -0.1270 16 1 0.3751 -4.8155 -0.4293 17 6 2.1559 -6.0566 -0.8587 18 6 2.8282 -6.3802 0.4860 19 1 3.7555 -5.8324 0.6535 20 6 2.9648 -7.8571 0.7526 21 6 4.2165 -8.4134 0.9307 22 6 4.3413 -9.7725 1.1805 23 8 5.5714 -10.3214 1.3603 24 6 5.6244 -11.7280 1.6069 25 9 5.0617 -12.4128 0.5245 26 9 6.9567 -12.1233 1.7678 27 9 4.9067 -12.0247 2.7706 28 6 3.2087 -10.5712 1.2403 29 6 1.9591 -10.0108 1.0567 30 6 1.8372 -8.6554 0.8131 31 6 1.6041 -5.7408 1.1624 32 1 -0.3633 -0.1168 1.0210 33 1 -0.3633 0.9425 -0.4094 34 1 -0.3633 -0.8259 -0.6116 35 1 1.6582 2.1289 -0.0004 36 1 4.5114 2.8190 1.0264 37 1 5.2832 2.3766 -0.5153 38 1 3.7383 3.2606 -0.5149 39 1 6.1466 0.7432 0.7244 40 1 5.9797 -0.2423 -2.0015 41 1 7.9076 -1.6800 0.4562 42 1 5.9120 -2.0691 1.7918 43 1 4.1493 -2.1304 0.0095 44 1 3.1100 -3.6462 -0.2198 45 1 1.4969 -6.8468 -1.2187 46 1 2.8509 -5.7038 -1.6206 47 1 5.0972 -7.7904 0.8785 48 1 3.3034 -11.6302 1.4300 49 1 1.0770 -10.6321 1.1036 50 1 0.8597 -8.2194 0.6695 51 1 1.8537 -5.1329 2.0320 52 1 0.7943 -6.4446 1.3548 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10860230_9599494.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:56:04 Heat of formation + Delta-G solvation = -175.147087 kcal Electronic energy + Delta-G solvation = -40256.276432 eV Core-core repulsion = 34545.465135 eV Total energy + Delta-G solvation = -5710.811297 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 422.154 amu Computer time = 1.48 seconds Orbital eigenvalues (eV) -51.53519 -49.25428 -49.13332 -41.92488 -41.41971 -40.58762 -39.56241 -38.18326 -37.54088 -34.92524 -34.36340 -33.18389 -32.11246 -31.18190 -29.29559 -28.55337 -27.23493 -26.61763 -26.14182 -25.50462 -23.92994 -23.70153 -23.18796 -22.45832 -21.13447 -20.81113 -20.25262 -20.10788 -19.61619 -19.06781 -17.96101 -17.48408 -17.38003 -17.10832 -16.74597 -16.45337 -16.33905 -16.24582 -16.12547 -16.05026 -15.89990 -15.78819 -15.60290 -15.53773 -15.53695 -15.25162 -15.24604 -15.10732 -14.84387 -14.65075 -14.56282 -14.39999 -14.22489 -14.12654 -13.91093 -13.78951 -13.44337 -13.35010 -13.05498 -12.89102 -12.85438 -12.74316 -12.62580 -12.59637 -12.49634 -12.14935 -11.87649 -11.75986 -11.64476 -11.22602 -10.70987 -10.41136 -10.12162 -9.89179 -9.88386 -9.60029 -9.53943 -5.07934 -0.24422 0.12896 0.18131 0.25687 0.39175 1.28600 1.62292 1.74980 1.76167 1.97797 2.07164 2.52340 2.65813 2.68210 2.90662 3.46779 3.48511 3.52721 3.61180 3.63466 3.65375 3.73530 3.77288 3.82792 3.92496 3.98792 4.09474 4.16736 4.22639 4.23970 4.32604 4.44913 4.47529 4.52448 4.57680 4.67524 4.71769 4.76018 4.80506 4.84979 4.88367 4.91038 4.95077 5.00333 5.03309 5.06123 5.10106 5.16375 5.19966 5.27399 5.30375 5.38736 5.48932 5.51001 5.54197 5.69828 5.81041 5.91558 6.50277 6.79011 7.19323 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.119 4.119 2 C -0.026 4.026 3 C -0.138 4.138 4 C -0.033 4.033 5 C -0.127 4.127 6 C -0.140 4.140 7 C -0.069 4.069 8 O -0.550 6.550 9 Si 0.764 3.236 10 C -0.063 4.063 11 C -0.157 4.157 12 C 0.561 3.439 13 O -0.561 6.561 14 N -0.698 5.698 15 C 0.116 3.884 16 H 0.092 0.908 17 C -0.122 4.122 18 C -0.070 4.070 19 H 0.118 0.882 20 C -0.033 4.033 21 C -0.127 4.127 22 C 0.083 3.917 23 O -0.319 6.319 24 C 0.607 3.393 25 F -0.165 7.165 26 F -0.133 7.133 27 F -0.166 7.166 28 C -0.209 4.209 29 C -0.080 4.080 30 C -0.133 4.133 31 C -0.144 4.144 32 H 0.068 0.932 33 H 0.071 0.929 34 H 0.081 0.919 35 H 0.143 0.857 36 H 0.079 0.921 37 H 0.080 0.920 38 H 0.077 0.923 39 H 0.108 0.892 40 H 0.396 0.604 41 H -0.297 1.297 42 H -0.281 1.281 43 H 0.154 0.846 44 H 0.413 0.587 45 H 0.106 0.894 46 H 0.095 0.905 47 H 0.151 0.849 48 H 0.130 0.870 49 H 0.150 0.850 50 H 0.151 0.849 51 H 0.066 0.934 52 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.073 0.240 -2.874 2.885 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.175 4.175 2 C -0.027 4.027 3 C -0.156 4.156 4 C -0.033 4.033 5 C -0.184 4.184 6 C -0.140 4.140 7 C -0.179 4.179 8 O -0.358 6.358 9 Si 0.670 3.330 10 C -0.081 4.081 11 C -0.160 4.160 12 C 0.350 3.650 13 O -0.441 6.441 14 N -0.350 5.350 15 C 0.010 3.990 16 H 0.110 0.890 17 C -0.160 4.160 18 C -0.089 4.089 19 H 0.136 0.864 20 C -0.033 4.033 21 C -0.146 4.146 22 C 0.041 3.959 23 O -0.239 6.239 24 C 0.517 3.483 25 F -0.147 7.147 26 F -0.114 7.114 27 F -0.149 7.149 28 C -0.227 4.227 29 C -0.098 4.098 30 C -0.151 4.151 31 C -0.182 4.182 32 H 0.087 0.913 33 H 0.090 0.910 34 H 0.100 0.900 35 H 0.160 0.840 36 H 0.097 0.903 37 H 0.099 0.901 38 H 0.096 0.904 39 H 0.126 0.874 40 H 0.246 0.754 41 H -0.225 1.225 42 H -0.208 1.208 43 H 0.171 0.829 44 H 0.251 0.749 45 H 0.124 0.876 46 H 0.114 0.886 47 H 0.169 0.831 48 H 0.147 0.853 49 H 0.168 0.832 50 H 0.168 0.832 51 H 0.085 0.915 52 H 0.120 0.880 Dipole moment (debyes) X Y Z Total from point charges 0.134 0.274 -1.914 1.938 hybrid contribution 0.386 0.037 0.597 0.712 sum 0.519 0.310 -1.317 1.450 Atomic orbital electron populations 1.21029 0.90123 1.03302 1.03030 1.20221 0.96977 0.92003 0.93461 1.21181 0.93680 0.98061 1.02668 1.20223 0.93488 0.95929 0.93672 1.21004 1.01008 0.93221 1.03134 1.20189 0.96533 0.92831 1.04452 1.25110 0.91090 1.12325 0.89386 1.86478 1.75981 1.56795 1.16518 0.94247 0.77608 0.78234 0.82952 1.21175 0.92368 0.97835 0.96732 1.19675 0.93755 0.92848 1.09750 1.18366 0.86749 0.84282 0.75643 1.90741 1.15100 1.87486 1.50763 1.45503 1.11320 1.04573 1.73623 1.21877 0.97298 0.82300 0.97489 0.88983 1.23404 0.99639 0.96982 0.96001 1.21710 0.99695 0.89946 0.97511 0.86391 1.19686 0.91331 0.96038 0.96229 1.20551 0.99556 0.90640 1.03808 1.18979 0.81023 0.94053 1.01814 1.86398 1.31307 1.19414 1.86798 1.19280 0.74804 0.79399 0.74841 1.93305 1.85055 1.80476 1.55879 1.93318 1.33388 1.89426 1.95309 1.93303 1.78253 1.93229 1.50066 1.21675 0.93367 1.00387 1.07300 1.21241 0.96681 0.95805 0.96109 1.21378 0.99762 0.93226 1.00713 1.23595 0.98265 0.98966 0.97383 0.91349 0.90972 0.90040 0.83957 0.90291 0.90103 0.90403 0.87417 0.75438 1.22468 1.20805 0.82924 0.74876 0.87611 0.88649 0.83136 0.85259 0.83217 0.83166 0.91473 0.87975 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.44 8.74 71.24 0.62 0.19 16 2 C -0.03 -0.07 5.91 -19.61 -0.12 -0.19 16 3 C -0.14 -0.09 9.31 22.23 0.21 0.11 16 4 C -0.03 0.01 5.89 -19.81 -0.12 -0.11 16 5 C -0.13 0.29 9.31 71.24 0.66 0.95 16 6 C -0.14 0.31 5.26 -19.90 -0.10 0.20 16 7 C -0.07 0.25 1.88 71.24 0.13 0.38 16 8 O -0.55 1.89 11.92 -148.98 -1.78 0.11 16 9 Si 0.76 -4.23 29.91 68.60 2.05 -2.18 16 10 C -0.06 0.24 8.13 22.53 0.18 0.42 16 11 C -0.16 -0.18 5.87 -20.09 -0.12 -0.29 16 12 C 0.56 1.35 7.70 86.79 0.67 2.02 16 13 O -0.56 -5.28 12.94 -3.89 -0.05 -5.33 16 14 N -0.70 3.31 5.21 -442.91 -2.31 1.01 16 15 C 0.12 -0.61 4.33 45.52 0.20 -0.41 16 16 H 0.09 -0.10 7.46 -2.38 -0.02 -0.12 16 17 C -0.12 1.17 7.29 31.12 0.23 1.40 16 18 C -0.07 0.60 3.85 -11.01 -0.04 0.56 16 19 H 0.12 -1.35 8.09 -2.39 -0.02 -1.37 16 20 C -0.03 0.15 5.29 -19.88 -0.11 0.05 16 21 C -0.13 0.22 9.65 22.37 0.22 0.44 16 22 C 0.08 0.17 6.48 22.51 0.15 0.32 16 23 O -0.32 -1.14 10.37 -92.37 -0.96 -2.10 16 24 C 0.61 1.64 3.42 113.37 0.39 2.03 16 25 F -0.17 -0.44 15.56 44.97 0.70 0.26 16 26 F -0.13 -0.42 17.53 44.97 0.79 0.37 16 27 F -0.17 -0.50 15.56 44.97 0.70 0.20 16 28 C -0.21 -0.21 8.26 22.37 0.18 -0.02 16 29 C -0.08 0.20 10.04 22.26 0.22 0.43 16 30 C -0.13 0.61 8.61 22.28 0.19 0.81 16 31 C -0.14 0.86 7.25 31.12 0.23 1.09 16 32 H 0.07 0.34 8.14 -2.39 -0.02 0.32 16 33 H 0.07 0.03 8.04 -2.39 -0.02 0.01 16 34 H 0.08 0.58 5.85 -2.39 -0.01 0.56 16 35 H 0.14 -0.32 8.06 -2.91 -0.02 -0.34 16 36 H 0.08 -0.26 8.14 -2.39 -0.02 -0.28 16 37 H 0.08 -0.08 6.18 -2.39 -0.01 -0.10 16 38 H 0.08 -0.28 8.08 -2.39 -0.02 -0.30 16 39 H 0.11 -0.24 7.37 -2.38 -0.02 -0.25 16 40 H 0.40 -4.49 8.70 -74.05 -0.64 -5.13 16 41 H -0.30 -0.75 7.11 99.48 0.71 -0.04 16 42 H -0.28 0.16 7.11 99.48 0.71 0.87 16 43 H 0.15 -1.62 3.51 -2.91 -0.01 -1.63 16 44 H 0.41 -4.51 6.78 -92.71 -0.63 -5.14 16 45 H 0.11 -1.04 7.72 -2.38 -0.02 -1.06 16 46 H 0.09 -1.12 8.14 -2.39 -0.02 -1.14 16 47 H 0.15 -0.77 8.05 -2.91 -0.02 -0.80 16 48 H 0.13 0.11 5.10 -2.91 -0.01 0.09 16 49 H 0.15 -0.97 8.06 -2.91 -0.02 -0.99 16 50 H 0.15 -1.29 6.66 -2.91 -0.02 -1.31 16 51 H 0.07 -0.23 8.14 -2.39 -0.02 -0.25 16 52 H 0.10 -0.70 6.32 -2.39 -0.02 -0.71 16 Total: 0.00 -19.20 428.30 2.82 -16.39 By element: Atomic # 1 Polarization: -18.88 SS G_CDS: -0.21 Total: -19.08 kcal Atomic # 6 Polarization: 6.48 SS G_CDS: 3.88 Total: 10.36 kcal Atomic # 7 Polarization: 3.31 SS G_CDS: -2.31 Total: 1.01 kcal Atomic # 8 Polarization: -4.53 SS G_CDS: -2.78 Total: -7.32 kcal Atomic # 9 Polarization: -1.36 SS G_CDS: 2.19 Total: 0.83 kcal Atomic # 14 Polarization: -4.23 SS G_CDS: 2.05 Total: -2.18 kcal Total: -19.20 2.82 -16.39 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10860230_9599494.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -158.758 kcal (2) G-P(sol) polarization free energy of solvation -19.205 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -177.963 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.816 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.389 kcal (6) G-S(sol) free energy of system = (1) + (5) -175.147 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.48 seconds