Wall clock time and date at job start Sat Mar 6 2021 15:03:03
AMSOL-version 7.1
by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers,
I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget,
B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar
Copyright 2004 by Regents of the University of Minnesota.
All rights reserved.
Notice: recipients of this code are asked to comply
with the user agreement in Section 1 of the documentation file.
*******************************************************************************
* 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION
* - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT)
* GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK
* TLIMIT= - A TIME OF 15. SECONDS REQUESTED
* CHARGE - CHARGE ON SYSTEM= 0
* AM1 - THE AM1 HAMILTONIAN TO BE USED
* SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED
* - CHARGE MODEL 2 WILL BE USED (CM2A)
* - THE SOLVENT IS WATER
*******************************************************************************
Atom NO. Chemical Bond length Bond angle Dihedral angle
number (k) symbol (angstroms) (degrees) (degrees)
(I) NA:I NB:NA:I NC:NB:NA:I NA NB NC
1 1 C
2 2 O 1.42901 * 1
3 3 C 1.35897 * 117.00367 * 2 1
4 4 C 1.38709 * 120.05289 * 359.97438 * 3 2 1
5 5 C 1.38170 * 119.93822 * 180.27546 * 4 3 2
6 6 C 1.38241 * 120.05864 * 359.49150 * 5 4 3
7 7 C 1.38289 * 120.10888 * 0.50712 * 6 5 4
8 8 C 1.50700 * 119.96845 * 179.72906 * 7 6 5
9 9 H 1.09004 * 112.85062 * 168.82936 * 8 7 6
10 10 C 1.53780 * 113.61611 * 300.01652 * 8 7 6
11 11 C 1.53778 * 87.08252 * 139.98171 * 10 8 7
12 12 H 1.08998 * 113.61892 * 220.01598 * 11 10 8
13 13 N 1.46507 * 113.61012 * 89.20217 * 11 10 8
14 14 C 1.46493 * 120.00030 * 300.00102 * 13 11 10
15 15 C 1.34776 * 119.99756 * 119.99689 * 13 11 10
16 16 O 1.21692 * 120.00278 * 0.04032 * 15 13 11
17 17 C 1.46675 * 119.99891 * 180.02562 * 15 13 11
18 18 C 1.37869 * 126.23460 * 189.67250 * 17 15 13
19 19 C 1.39840 * 107.08656 * 179.85073 * 18 17 15
20 20 C 1.35453 * 107.86361 * 0.41774 * 19 18 17
21 21 C 1.50696 * 125.56317 * 179.76076 * 20 19 18
22 22 O 1.42901 * 109.47104 * 119.97878 * 21 20 19
23 23 Si 1.86296 * 109.47425 * 359.97438 * 21 20 19
24 24 N 1.35539 * 108.86830 * 359.74261 * 20 19 18
25 25 C 1.53779 * 87.08149 * 334.56996 * 11 10 8
26 26 C 1.38117 * 120.05729 * 359.74390 * 7 6 5
27 27 H 1.09003 * 109.47445 * 179.97438 * 1 2 3
28 28 H 1.09002 * 109.47122 * 300.00621 * 1 2 3
29 29 H 1.09004 * 109.46384 * 60.00212 * 1 2 3
30 30 H 1.07991 * 120.03319 * 359.97438 * 4 3 2
31 31 H 1.08006 * 119.96667 * 179.74341 * 5 4 3
32 32 H 1.08001 * 119.94652 * 180.25589 * 6 5 4
33 33 H 1.09004 * 113.61927 * 254.53553 * 10 8 7
34 34 H 1.09005 * 113.61103 * 25.43925 * 10 8 7
35 35 H 1.09001 * 109.47048 * 95.99504 * 14 13 11
36 36 H 1.09005 * 109.47075 * 215.99700 * 14 13 11
37 37 H 1.08998 * 109.47620 * 335.99408 * 14 13 11
38 38 H 1.08004 * 126.45837 * 0.02562 * 18 17 15
39 39 H 1.08001 * 126.06882 * 180.15569 * 19 18 17
40 40 H 1.09001 * 109.47145 * 239.97579 * 21 20 19
41 41 H 0.96703 * 113.99965 * 299.99836 * 22 21 20
42 42 H 1.48492 * 110.00211 * 179.97438 * 23 21 20
43 43 H 1.48510 * 109.99973 * 301.32140 * 23 21 20
44 44 H 0.96997 * 125.67012 * 180.02562 * 24 20 19
45 45 H 1.08993 * 113.61373 * 270.87899 * 25 11 10
46 46 H 1.09007 * 113.61071 * 139.97574 * 25 11 10
47 47 H 1.08004 * 120.02567 * 179.97438 * 26 7 6
Note: An asterisk (*) indicates this parameter was or will be optimized.
Cartesian coordinates (angstroms)
NO. Atom X Y Z
1 6 0.0000 0.0000 0.0000
2 8 1.4290 0.0000 0.0000
3 6 2.0460 1.2108 0.0000
4 6 1.2917 2.3749 -0.0005
5 6 1.9215 3.6047 -0.0063
6 6 3.3021 3.6756 -0.0009
7 6 4.0563 2.5165 -0.0003
8 6 5.5612 2.5975 -0.0006
9 1 6.0369 1.6364 0.1945
10 6 6.1382 3.3338 -1.2212
11 6 7.1518 3.9733 -0.2576
12 1 7.3476 5.0253 -0.4648
13 7 8.3777 3.1888 -0.0900
14 6 8.3070 1.8219 0.4321
15 6 9.5705 3.7247 -0.4163
16 8 9.6293 4.8604 -0.8495
17 6 10.7978 2.9392 -0.2491
18 6 12.0886 3.4105 -0.3608
19 6 12.9429 2.3293 -0.1224
20 6 12.1760 1.2386 0.1161
21 6 12.6902 -0.1460 0.4154
22 8 12.2226 -0.5603 1.7006
23 14 14.5531 -0.1318 0.4073
24 7 10.8706 1.5958 0.0419
25 6 6.1164 3.7472 0.8567
26 6 3.4316 1.2847 0.0002
27 1 -0.3634 -1.0277 -0.0005
28 1 -0.3633 0.5139 0.8899
29 1 -0.3632 0.5138 -0.8901
30 1 0.2132 2.3200 -0.0014
31 1 1.3346 4.5113 -0.0109
32 1 3.7925 4.6379 -0.0012
33 1 6.5934 2.6702 -1.9565
34 1 5.4471 4.0497 -1.6661
35 1 8.2969 1.1159 -0.3983
36 1 9.1747 1.6286 1.0629
37 1 7.3969 1.7042 1.0202
38 1 12.3844 4.4244 -0.5868
39 1 14.0225 2.3579 -0.1314
40 1 12.3289 -0.8398 -0.3437
41 1 12.5067 0.0126 2.4260
42 1 15.0727 -1.4913 0.7018
43 1 15.0518 0.3280 -0.9139
44 1 10.1138 1.0034 0.1727
45 1 5.4194 4.5760 0.9798
46 1 6.5540 3.4172 1.7989
47 1 4.0212 0.3797 0.0003
There are 63 doubly filled levels
RHF calculation, no. of doubly occupied orbitals= 63
No. of singly occupied orbitals= 1
REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN:
H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987).
REFERENCE FOR CHARGE MODEL 2:
J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885.
REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL:
J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and
D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63
P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted.
CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R
& SOLVNT=WATER
s_22_10860584_6580494.mol2 47
1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED
SCF FIELD WAS ACHIEVED
Wall clock time and date at job start Sat Mar 6 2021 15:03:03
Heat of formation + Delta-G solvation = 34.613142 kcal
Electronic energy + Delta-G solvation = -29488.009926 eV
Core-core repulsion = 25412.994291 eV
Total energy + Delta-G solvation = -4075.015636 eV
No. of doubly occupied orbitals = 63
and no. of open levels = 1
Molecular weight
(most abundant/longest-lived isotopes) = 343.162 amu
Computer time = 0.83 seconds
Orbital eigenvalues (eV)
-42.82012 -41.73154 -40.83022 -39.56664 -38.03623 -37.66470 -35.67499 -32.54165
-32.05545 -31.41810 -30.88277 -28.76271 -28.21506 -27.22557 -26.75620 -25.52367
-23.70491 -23.39437 -21.98195 -21.83328 -20.92161 -20.16640 -19.10670 -18.83364
-18.02502 -17.45965 -17.21128 -16.98355 -16.85706 -16.69288 -16.44448 -16.17891
-15.92307 -15.56464 -15.29883 -14.84934 -14.72728 -14.51208 -14.41530 -14.29681
-14.15688 -13.99564 -13.91114 -13.71851 -13.50771 -13.27501 -13.17225 -13.10507
-12.64036 -12.27299 -12.19238 -12.11115 -12.03937 -11.68795 -11.61539 -11.35999
-11.20818 -10.65148 -10.12123 -9.90397 -9.76609 -9.26853 -9.17586 -4.90244
0.26763 0.30528 0.45311 1.23890 1.51065 1.64808 1.75692 1.95789
2.17122 2.27914 2.32661 2.70567 3.29254 3.47348 3.50311 3.59720
3.61877 3.66753 3.81114 3.85866 3.89998 4.00548 4.14220 4.22266
4.25031 4.27694 4.31199 4.32618 4.33738 4.43678 4.49850 4.53395
4.54420 4.60456 4.68551 4.72311 4.79135 4.88284 4.93918 4.95977
5.04511 5.09840 5.11519 5.31532 5.41002 5.48806 5.60753 5.66421
5.79571 5.80422 6.12731 6.31561 6.41135 6.68669 6.91102
Net atomic charges, atomic populations, and dipole contributions
calculated with CM2
Atom NO. Type Charge No. of electrons
1 C 0.020 3.980
2 O -0.340 6.340
3 C 0.110 3.890
4 C -0.221 4.221
5 C -0.083 4.083
6 C -0.160 4.160
7 C -0.034 4.034
8 C -0.074 4.074
9 H 0.116 0.884
10 C -0.133 4.133
11 C 0.112 3.888
12 H 0.095 0.905
13 N -0.591 5.591
14 C 0.036 3.964
15 C 0.587 3.413
16 O -0.569 6.569
17 C -0.065 4.065
18 C -0.116 4.116
19 C -0.204 4.204
20 C 0.023 3.977
21 C -0.055 4.055
22 O -0.553 6.553
23 Si 0.805 3.195
24 N -0.520 5.520
25 C -0.129 4.129
26 C -0.165 4.165
27 H 0.115 0.885
28 H 0.063 0.937
29 H 0.062 0.938
30 H 0.139 0.861
31 H 0.143 0.857
32 H 0.140 0.860
33 H 0.068 0.932
34 H 0.100 0.900
35 H 0.076 0.924
36 H 0.084 0.916
37 H 0.114 0.886
38 H 0.146 0.854
39 H 0.169 0.831
40 H 0.115 0.885
41 H 0.399 0.601
42 H -0.295 1.295
43 H -0.287 1.287
44 H 0.430 0.570
45 H 0.110 0.890
46 H 0.084 0.916
47 H 0.132 0.868
For the charges calculated by CM2:
Dipole moment (debyes) X Y Z Total
from point charges -1.751 -2.397 3.942 4.935
Note: The Mulliken population analysis charges presented below were not
used in the solvation calculation but are provided for completeness.
The chosen solvation model uses CM2 partial charges for calculating
solvation energies.
Net atomic charges, atomic populations, and dipole contributions
using Mulliken population analysis
Atom NO. Type Charge No. of electrons
1 C -0.074 4.074
2 O -0.254 6.254
3 C 0.065 3.935
4 C -0.240 4.240
5 C -0.101 4.101
6 C -0.178 4.178
7 C -0.034 4.034
8 C -0.092 4.092
9 H 0.134 0.866
10 C -0.171 4.171
11 C 0.008 3.992
12 H 0.113 0.887
13 N -0.322 5.322
14 C -0.106 4.106
15 C 0.377 3.623
16 O -0.448 6.448
17 C -0.178 4.178
18 C -0.142 4.142
19 C -0.228 4.228
20 C -0.096 4.096
21 C -0.165 4.165
22 O -0.361 6.361
23 Si 0.709 3.291
24 N -0.126 5.126
25 C -0.167 4.167
26 C -0.184 4.184
27 H 0.133 0.867
28 H 0.082 0.918
29 H 0.081 0.919
30 H 0.157 0.843
31 H 0.161 0.839
32 H 0.158 0.842
33 H 0.087 0.913
34 H 0.118 0.882
35 H 0.095 0.905
36 H 0.102 0.898
37 H 0.132 0.868
38 H 0.164 0.836
39 H 0.186 0.814
40 H 0.133 0.867
41 H 0.250 0.750
42 H -0.222 1.222
43 H -0.213 1.213
44 H 0.278 0.722
45 H 0.128 0.872
46 H 0.103 0.897
47 H 0.150 0.850
Dipole moment (debyes) X Y Z Total
from point charges -1.422 -2.891 3.037 4.428
hybrid contribution -1.373 -0.204 -0.540 1.490
sum -2.795 -3.095 2.498 4.861
Atomic orbital electron populations
1.23293 0.76654 1.05376 1.02108 1.86038 1.23271 1.27297 1.88779
1.19288 0.92835 0.84653 0.96768 1.21492 1.00941 0.92431 1.09141
1.21247 0.95004 0.97559 0.96322 1.21180 0.93814 0.98767 1.04012
1.19588 0.95338 0.91921 0.96574 1.21889 0.90106 0.99876 0.97286
0.86587 1.23434 0.97479 0.99898 0.96317 1.22005 0.83039 0.96120
0.98038 0.88705 1.47425 1.05342 1.15621 1.63842 1.22715 1.05753
0.81701 1.00421 1.17360 0.82487 0.85397 0.77018 1.90827 1.86625
1.19673 1.47683 1.20225 0.94901 0.84825 1.17849 1.21488 0.90294
1.00295 1.02173 1.20953 1.00377 0.91345 1.10089 1.21459 0.83972
0.97576 1.06606 1.25052 1.13004 0.90235 0.88164 1.86470 1.78287
1.55759 1.15617 0.92968 0.70953 0.80762 0.84406 1.43136 1.08536
1.07992 1.52927 1.23475 0.96893 0.98963 0.97362 1.20489 0.91475
0.98816 1.07618 0.86691 0.91799 0.91925 0.84286 0.83900 0.84230
0.91289 0.88172 0.90525 0.89767 0.86797 0.83605 0.81420 0.86719
0.75014 1.22217 1.21331 0.72166 0.87222 0.89748 0.85029
Number of geometries 1
Number of calculations of the screened coulomb radii 1
The total number of SCF iterations 14.
Note: The number of geometries may not
correspond to the number of cycles due to rejected geometry changes.
In the following table subtotal= G_P + SS G_CDS.
Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M
number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value
1 C 0.02 -0.05 9.81 113.37 1.11 1.06 16
2 O -0.34 -1.68 10.50 -92.40 -0.97 -2.65 16
3 C 0.11 0.51 6.69 22.51 0.15 0.66 16
4 C -0.22 -0.42 9.04 22.37 0.20 -0.22 16
5 C -0.08 -0.01 10.04 22.25 0.22 0.21 16
6 C -0.16 0.07 8.61 22.28 0.19 0.26 16
7 C -0.03 0.00 5.29 -19.88 -0.11 -0.11 16
8 C -0.07 0.26 3.30 -11.01 -0.04 0.23 16
9 H 0.12 -0.70 5.40 -2.38 -0.01 -0.72 16
10 C -0.13 0.20 7.21 31.12 0.22 0.42 16
11 C 0.11 0.04 4.45 45.51 0.20 0.24 16
12 H 0.09 0.44 7.23 -2.39 -0.02 0.43 16
13 N -0.59 -0.59 3.08 -824.36 -2.54 -3.13 16
14 C 0.04 -0.22 7.51 127.77 0.96 0.74 16
15 C 0.59 4.60 7.64 86.45 0.66 5.26 16
16 O -0.57 -9.03 16.38 -4.32 -0.07 -9.10 16
17 C -0.06 -0.30 6.65 40.35 0.27 -0.03 16
18 C -0.12 -0.56 10.67 22.57 0.24 -0.32 16
19 C -0.20 0.01 9.32 22.01 0.21 0.21 16
20 C 0.02 -0.04 6.47 41.34 0.27 0.23 16
21 C -0.05 0.24 3.08 71.23 0.22 0.46 16
22 O -0.55 2.66 12.88 -148.98 -1.92 0.74 16
23 Si 0.80 -4.06 30.54 68.60 2.10 -1.96 16
24 N -0.52 0.54 5.05 -171.94 -0.87 -0.33 16
25 C -0.13 0.50 6.67 31.12 0.21 0.70 16
26 C -0.17 -0.50 9.65 22.36 0.22 -0.29 16
27 H 0.11 -0.66 8.14 -2.39 -0.02 -0.67 16
28 H 0.06 -0.26 7.66 -2.39 -0.02 -0.28 16
29 H 0.06 -0.24 7.66 -2.39 -0.02 -0.26 16
30 H 0.14 -0.22 6.30 -2.92 -0.02 -0.24 16
31 H 0.14 -0.58 8.06 -2.91 -0.02 -0.60 16
32 H 0.14 -0.55 6.65 -2.91 -0.02 -0.57 16
33 H 0.07 0.00 8.14 -2.39 -0.02 -0.02 16
34 H 0.10 -0.17 7.72 -2.38 -0.02 -0.19 16
35 H 0.08 -0.65 7.73 -2.39 -0.02 -0.66 16
36 H 0.08 -0.60 5.17 -2.38 -0.01 -0.62 16
37 H 0.11 -1.03 4.49 -2.39 -0.01 -1.04 16
38 H 0.15 0.77 8.06 -2.91 -0.02 0.74 16
39 H 0.17 -0.77 6.17 -2.91 -0.02 -0.79 16
40 H 0.12 -0.47 7.96 -2.39 -0.02 -0.49 16
41 H 0.40 -4.82 8.70 -74.06 -0.64 -5.47 16
42 H -0.29 -0.58 7.11 99.48 0.71 0.13 16
43 H -0.29 -0.21 7.11 99.48 0.71 0.49 16
44 H 0.43 -2.25 4.92 -92.71 -0.46 -2.70 16
45 H 0.11 -0.54 6.31 -2.39 -0.02 -0.56 16
46 H 0.08 -0.39 7.47 -2.38 -0.02 -0.41 16
47 H 0.13 0.16 8.05 -2.91 -0.02 0.13 16
Total: 0.00 -22.19 372.75 1.11 -21.09
By element:
Atomic # 1 Polarization: -14.34 SS G_CDS: -0.03 Total: -14.37 kcal
Atomic # 6 Polarization: 4.31 SS G_CDS: 5.41 Total: 9.72 kcal
Atomic # 7 Polarization: -0.05 SS G_CDS: -3.41 Total: -3.46 kcal
Atomic # 8 Polarization: -8.05 SS G_CDS: -2.96 Total: -11.01 kcal
Atomic # 14 Polarization: -4.06 SS G_CDS: 2.10 Total: -1.96 kcal
Total: -22.19 1.11 -21.09 kcal
The number of atoms in the molecule is 47
The average number of expansion shells was 16.00
The maximum number of expansion shells was 16
The minimum number of expansion shells was 16
**** NOTA BENE ****
This is the net solvation energy for this exact molecular structure
(nuclear and electronic)! The standard-state solvation energy should be
obtained as the difference between the heat of formation plus delta-G solvation
for the relaxed solvated system and that for the relaxed gas-phase system.
s_22_10860584_6580494.mol2 47
1SCF run
This is a breakdown of the solvation energy calculated
without geometric relaxation in solution:
(1) E-EN(sol) electronic-nuclear energy of solute 55.699 kcal
(2) G-P(sol) polarization free energy of solvation -22.192 kcal
(3) G-ENP(sol) elect.-nuc.-pol. free energy of system 33.507 kcal
(4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.106 kcal
(5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.086 kcal
(6) G-S(sol) free energy of system = (1) + (5) 34.613 kcal
1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED
Total computer time = 0.83 seconds