Wall clock time and date at job start Sat Mar 6 2021 15:03:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35900 * 116.99842 * 2 1 4 4 C 1.38714 * 120.05670 * 359.97438 * 3 2 1 5 5 C 1.38166 * 119.94255 * 179.97438 * 4 3 2 6 6 C 1.38244 * 120.05571 * 359.97367 * 5 4 3 7 7 C 1.38290 * 120.11202 * 0.04870 * 6 5 4 8 8 C 1.50702 * 119.97051 * 179.97438 * 7 6 5 9 9 H 1.09000 * 112.84582 * 168.80115 * 8 7 6 10 10 C 1.53784 * 113.61596 * 300.00234 * 8 7 6 11 11 C 1.53782 * 87.07872 * 139.97830 * 10 8 7 12 12 H 1.09001 * 113.61281 * 219.93064 * 11 10 8 13 13 N 1.46505 * 113.61216 * 89.11891 * 11 10 8 14 14 C 1.46499 * 119.99577 * 293.49567 * 13 11 10 15 15 C 1.34775 * 120.00166 * 113.49215 * 13 11 10 16 16 O 1.21636 * 119.99995 * 6.22194 * 15 13 11 17 17 C 1.47191 * 120.00060 * 186.21449 * 15 13 11 18 18 C 1.36001 * 123.46099 * 201.45157 * 17 15 13 19 19 S 1.70448 * 110.81770 * 180.02562 * 18 17 15 20 20 C 1.75504 * 92.44364 * 359.97438 * 19 18 17 21 21 C 1.50706 * 124.71232 * 179.97438 * 20 19 18 22 22 O 1.42900 * 109.47193 * 245.02606 * 21 20 19 23 23 Si 1.86294 * 109.47098 * 5.02810 * 21 20 19 24 24 C 1.32763 * 110.57792 * 0.24748 * 20 19 18 25 25 C 1.53778 * 113.61175 * 37.50014 * 8 7 6 26 26 C 1.38120 * 120.05428 * 0.22831 * 7 6 5 27 27 H 1.09002 * 109.47395 * 179.97438 * 1 2 3 28 28 H 1.08999 * 109.47386 * 300.00285 * 1 2 3 29 29 H 1.09004 * 109.47316 * 60.00230 * 1 2 3 30 30 H 1.07998 * 120.02804 * 359.95647 * 4 3 2 31 31 H 1.07999 * 119.96701 * 180.02562 * 5 4 3 32 32 H 1.07993 * 119.94239 * 180.02562 * 6 5 4 33 33 H 1.08995 * 113.61404 * 25.43147 * 10 8 7 34 34 H 1.09003 * 113.68701 * 254.54088 * 10 8 7 35 35 H 1.09008 * 109.47220 * 208.98573 * 14 13 11 36 36 H 1.08999 * 109.47681 * 328.98484 * 14 13 11 37 37 H 1.09003 * 109.47274 * 88.98786 * 14 13 11 38 38 H 1.08001 * 124.59671 * 0.02924 * 18 17 15 39 39 H 1.08999 * 109.46985 * 125.02529 * 21 20 19 40 40 H 0.96704 * 113.99646 * 180.02562 * 22 21 20 41 41 H 1.48502 * 110.00217 * 178.67904 * 23 21 20 42 42 H 1.48498 * 110.00244 * 299.99826 * 23 21 20 43 43 H 1.07998 * 123.46497 * 179.75359 * 24 20 19 44 44 H 1.09004 * 113.61752 * 105.47047 * 25 8 7 45 45 H 1.09004 * 113.61554 * 334.56263 * 25 8 7 46 46 H 1.08001 * 120.02589 * 179.71683 * 26 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 1.2916 2.3750 -0.0005 5 6 1.9213 3.6048 0.0000 6 6 3.3019 3.6758 0.0016 7 6 4.0562 2.5167 0.0017 8 6 5.5610 2.5978 0.0029 9 1 6.0365 1.6366 0.1979 10 6 6.1392 3.3351 -1.2166 11 6 7.1518 3.9739 -0.2515 12 1 7.3487 5.0258 -0.4587 13 7 8.3768 3.1885 -0.0818 14 6 8.3222 1.8784 0.5716 15 6 9.5538 3.6711 -0.5268 16 8 9.6198 4.8034 -0.9661 17 6 10.7595 2.8280 -0.4810 18 6 12.0246 3.3270 -0.4991 19 16 13.1729 2.0691 -0.4345 20 6 11.9276 0.8336 -0.3807 21 6 12.1915 -0.6484 -0.3096 22 8 11.7195 -1.2742 -1.5045 23 14 14.0223 -0.9454 -0.1346 24 6 10.7207 1.3856 -0.4173 25 6 6.1152 3.7468 0.8616 26 6 3.4315 1.2849 -0.0046 27 1 -0.3634 -1.0277 -0.0005 28 1 -0.3634 0.5139 0.8899 29 1 -0.3634 0.5138 -0.8900 30 1 0.2130 2.3200 -0.0017 31 1 1.3343 4.5114 0.0000 32 1 3.7921 4.6380 0.0025 33 1 5.4485 4.0512 -1.6617 34 1 6.5953 2.6731 -1.9528 35 1 9.2739 1.6779 1.0639 36 1 7.5223 1.8745 1.3120 37 1 8.1300 1.1077 -0.1750 38 1 12.2686 4.3780 -0.5477 39 1 11.6713 -1.0692 0.5508 40 1 11.8565 -2.2312 -1.5278 41 1 14.2930 -2.4019 -0.0314 42 1 14.7430 -0.3764 -1.3016 43 1 9.8040 0.8150 -0.3988 44 1 6.5519 3.4163 1.8040 45 1 5.4180 4.5757 0.9846 46 1 4.0210 0.3800 -0.0092 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10860584_6894386.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:03:18 Heat of formation + Delta-G solvation = 11.057032 kcal Electronic energy + Delta-G solvation = -29217.984988 eV Core-core repulsion = 25168.299899 eV Total energy + Delta-G solvation = -4049.685088 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.123 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -41.98647 -40.99435 -39.89932 -38.71171 -37.95496 -37.24834 -35.23032 -32.22256 -31.86358 -31.01227 -28.76609 -28.25431 -27.05412 -26.65504 -26.45485 -24.84122 -23.54586 -22.27783 -21.22903 -20.71146 -19.68963 -19.03473 -18.70722 -18.43941 -17.48461 -17.17526 -17.17171 -16.87109 -16.67092 -16.55447 -16.12807 -15.97515 -15.77530 -15.37331 -14.74027 -14.59824 -14.45182 -14.25455 -14.09066 -14.02608 -13.88717 -13.66982 -13.63829 -13.45158 -13.29394 -13.12059 -12.93931 -12.71318 -12.64724 -12.32727 -12.23845 -12.08010 -11.83629 -11.64257 -11.55573 -11.27642 -10.85597 -10.62906 -9.96873 -9.74551 -9.62473 -9.43593 -9.10862 -5.15424 -0.24328 0.35662 0.36607 0.52573 0.70311 0.90297 1.15035 1.49000 1.82643 1.96792 2.27336 2.32195 2.76820 3.14694 3.38081 3.52304 3.64973 3.68751 3.83161 3.86874 3.91097 3.95838 4.02779 4.08747 4.15038 4.18822 4.20719 4.22001 4.32031 4.35689 4.44318 4.51386 4.55723 4.60689 4.61435 4.66684 4.71238 4.79377 4.87398 4.90554 4.97398 4.99629 5.10298 5.15051 5.18301 5.36678 5.50591 5.59524 5.72820 5.81852 6.27934 6.34747 6.45668 7.19832 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.319 6.319 3 C 0.129 3.871 4 C -0.213 4.213 5 C -0.076 4.076 6 C -0.154 4.154 7 C -0.031 4.031 8 C -0.079 4.079 9 H 0.103 0.897 10 C -0.139 4.139 11 C 0.120 3.880 12 H 0.111 0.889 13 N -0.593 5.593 14 C 0.060 3.940 15 C 0.585 3.415 16 O -0.533 6.533 17 C -0.165 4.165 18 C -0.173 4.173 19 S 0.204 5.796 20 C -0.197 4.197 21 C -0.033 4.033 22 O -0.532 6.532 23 Si 0.643 3.357 24 C -0.091 4.091 25 C -0.139 4.139 26 C -0.149 4.149 27 H 0.101 0.899 28 H 0.056 0.944 29 H 0.056 0.944 30 H 0.127 0.873 31 H 0.125 0.875 32 H 0.125 0.875 33 H 0.096 0.904 34 H 0.075 0.925 35 H 0.085 0.915 36 H 0.080 0.920 37 H 0.062 0.938 38 H 0.178 0.822 39 H 0.087 0.913 40 H 0.383 0.617 41 H -0.238 1.238 42 H -0.234 1.234 43 H 0.162 0.838 44 H 0.079 0.921 45 H 0.101 0.899 46 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.806 -3.413 4.447 5.664 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.232 6.232 3 C 0.084 3.916 4 C -0.232 4.232 5 C -0.094 4.094 6 C -0.173 4.173 7 C -0.032 4.032 8 C -0.097 4.097 9 H 0.121 0.879 10 C -0.177 4.177 11 C 0.016 3.984 12 H 0.129 0.871 13 N -0.325 5.325 14 C -0.083 4.083 15 C 0.373 3.627 16 O -0.411 6.411 17 C -0.182 4.182 18 C -0.311 4.311 19 S 0.470 5.530 20 C -0.314 4.314 21 C -0.145 4.145 22 O -0.340 6.340 23 Si 0.542 3.458 24 C -0.120 4.120 25 C -0.177 4.177 26 C -0.168 4.168 27 H 0.119 0.881 28 H 0.075 0.925 29 H 0.074 0.926 30 H 0.145 0.855 31 H 0.143 0.857 32 H 0.143 0.857 33 H 0.115 0.885 34 H 0.093 0.907 35 H 0.103 0.897 36 H 0.099 0.901 37 H 0.080 0.920 38 H 0.195 0.805 39 H 0.105 0.895 40 H 0.231 0.769 41 H -0.161 1.161 42 H -0.158 1.158 43 H 0.179 0.821 44 H 0.097 0.903 45 H 0.120 0.880 46 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges 1.458 -2.817 3.732 4.898 hybrid contribution -2.653 -0.778 -0.654 2.841 sum -1.195 -3.595 3.079 4.882 Atomic orbital electron populations 1.23082 0.78112 1.04172 1.01437 1.86077 1.21599 1.26918 1.88598 1.19035 0.92319 0.84247 0.96001 1.21266 1.00141 0.92469 1.09307 1.20945 0.94588 0.97049 0.96856 1.20924 0.93631 0.98153 1.04545 1.19467 0.94735 0.92158 0.96794 1.21801 0.90795 0.99363 0.97736 0.87858 1.23482 0.97862 0.99985 0.96396 1.21930 0.83060 0.96783 0.96646 0.87135 1.47280 1.06611 1.19529 1.59067 1.22484 1.04057 0.83980 0.97755 1.17637 0.82145 0.85785 0.77155 1.90812 1.85271 1.18695 1.46283 1.20096 0.93370 0.93126 1.11641 1.25731 0.96530 1.05695 1.03157 1.83164 1.08047 0.93354 1.68426 1.23554 0.96851 0.97882 1.13086 1.23996 1.10984 0.89415 0.90105 1.86618 1.82674 1.25675 1.39048 0.95283 0.75218 0.85989 0.89311 1.21686 0.98736 0.92233 0.99352 1.23488 0.97600 0.98847 0.97762 1.20289 0.91293 0.98186 1.06987 0.88063 0.92545 0.92563 0.85521 0.85674 0.85708 0.88533 0.90675 0.89654 0.90115 0.92007 0.80459 0.89541 0.76853 1.16123 1.15765 0.82052 0.90258 0.88049 0.85352 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 9.81 101.05 0.99 0.96 16 2 O -0.32 -0.77 10.50 -19.43 -0.20 -0.98 16 3 C 0.13 0.31 6.69 -39.22 -0.26 0.05 16 4 C -0.21 -0.27 9.04 -39.43 -0.36 -0.62 16 5 C -0.08 -0.05 10.04 -39.61 -0.40 -0.45 16 6 C -0.15 -0.07 8.61 -39.56 -0.34 -0.41 16 7 C -0.03 -0.02 5.29 -104.65 -0.55 -0.57 16 8 C -0.08 0.07 3.34 -90.96 -0.30 -0.23 16 9 H 0.10 -0.18 5.78 -51.93 -0.30 -0.48 16 10 C -0.14 0.01 7.29 -25.92 -0.19 -0.18 16 11 C 0.12 0.06 4.43 -67.12 -0.30 -0.23 16 12 H 0.11 0.23 7.29 -51.93 -0.38 -0.15 16 13 N -0.59 -0.57 3.08 -174.35 -0.54 -1.11 16 14 C 0.06 -0.12 7.03 59.85 0.42 0.30 16 15 C 0.58 2.19 7.57 -12.63 -0.10 2.09 16 16 O -0.53 -3.87 16.37 5.25 0.09 -3.78 16 17 C -0.17 -0.36 5.54 -104.63 -0.58 -0.94 16 18 C -0.17 -0.25 10.58 29.93 0.32 0.07 16 19 S 0.20 -0.02 20.20 -107.50 -2.17 -2.19 16 20 C -0.20 -0.04 5.69 -36.18 -0.21 -0.25 16 21 C -0.03 0.04 2.93 36.01 0.11 0.15 16 22 O -0.53 0.03 12.85 -35.23 -0.45 -0.42 16 23 Si 0.64 -1.09 30.92 -169.99 -5.26 -6.34 16 24 C -0.09 -0.05 7.90 -39.02 -0.31 -0.36 16 25 C -0.14 0.17 6.65 -25.92 -0.17 0.00 16 26 C -0.15 -0.26 9.65 -39.43 -0.38 -0.64 16 27 H 0.10 -0.26 8.14 -51.93 -0.42 -0.69 16 28 H 0.06 -0.10 7.66 -51.93 -0.40 -0.50 16 29 H 0.06 -0.10 7.66 -51.93 -0.40 -0.50 16 30 H 0.13 -0.06 6.30 -52.49 -0.33 -0.39 16 31 H 0.13 -0.16 8.06 -52.49 -0.42 -0.58 16 32 H 0.13 -0.14 6.65 -52.49 -0.35 -0.49 16 33 H 0.10 -0.03 7.72 -51.93 -0.40 -0.43 16 34 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 35 H 0.09 -0.21 5.50 -51.92 -0.29 -0.49 16 36 H 0.08 -0.25 5.06 -51.93 -0.26 -0.51 16 37 H 0.06 -0.17 6.85 -51.93 -0.36 -0.52 16 38 H 0.18 0.16 8.06 -52.49 -0.42 -0.26 16 39 H 0.09 -0.31 7.96 -51.93 -0.41 -0.72 16 40 H 0.38 -1.58 8.74 45.56 0.40 -1.18 16 41 H -0.24 0.04 7.11 56.52 0.40 0.45 16 42 H -0.23 -0.32 7.11 56.52 0.40 0.08 16 43 H 0.16 -0.16 4.89 -52.49 -0.26 -0.42 16 44 H 0.08 -0.12 6.93 -51.93 -0.36 -0.48 16 45 H 0.10 -0.17 6.31 -51.93 -0.33 -0.50 16 46 H 0.13 0.11 8.05 -52.49 -0.42 -0.32 16 LS Contribution 377.97 15.07 5.70 5.70 Total: 0.00 -8.66 377.97 -11.18 -19.84 By element: Atomic # 1 Polarization: -3.72 SS G_CDS: -5.73 Total: -9.45 kcal Atomic # 6 Polarization: 1.35 SS G_CDS: -2.61 Total: -1.26 kcal Atomic # 7 Polarization: -0.57 SS G_CDS: -0.54 Total: -1.11 kcal Atomic # 8 Polarization: -4.61 SS G_CDS: -0.57 Total: -5.18 kcal Atomic # 14 Polarization: -1.09 SS G_CDS: -5.26 Total: -6.34 kcal Atomic # 16 Polarization: -0.02 SS G_CDS: -2.17 Total: -2.19 kcal Total LS contribution 5.70 Total: 5.70 kcal Total: -8.66 -11.18 -19.84 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10860584_6894386.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 30.894 kcal (2) G-P(sol) polarization free energy of solvation -8.660 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 22.233 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.176 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.837 kcal (6) G-S(sol) free energy of system = (1) + (5) 11.057 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds