Wall clock time and date at job start Sat Mar 6 2021 13:12:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.53000 * 109.47149 * 2 1 4 4 O 1.42905 * 109.47157 * 119.99809 * 2 1 3 5 5 C 1.42905 * 113.99659 * 89.99901 * 4 2 1 6 6 H 1.09003 * 112.84858 * 18.80518 * 5 4 2 7 7 C 1.53780 * 113.61107 * 149.99920 * 5 4 2 8 8 C 1.53783 * 87.08122 * 139.98190 * 7 5 4 9 9 H 1.08996 * 113.61238 * 89.19447 * 8 7 5 10 10 N 1.46497 * 113.61480 * 220.01981 * 8 7 5 11 11 C 1.34778 * 119.99951 * 204.99926 * 10 8 7 12 12 O 1.21289 * 119.99646 * 359.97438 * 11 10 8 13 13 C 1.50694 * 120.00019 * 180.02562 * 11 10 8 14 14 C 1.52996 * 109.47471 * 64.99874 * 13 11 10 15 15 O 1.42904 * 109.46964 * 185.00004 * 13 11 10 16 16 C 1.35906 * 116.99606 * 155.32254 * 15 13 11 17 17 C 1.38728 * 120.05890 * 5.08131 * 16 15 13 18 18 C 1.38146 * 119.94480 * 179.74090 * 17 16 15 19 19 C 1.38269 * 120.05128 * 0.51570 * 18 17 16 20 20 C 1.50700 * 119.94151 * 179.74678 * 19 18 17 21 21 O 1.42908 * 109.46631 * 245.01906 * 20 19 18 22 22 Si 1.86299 * 109.47475 * 5.01369 * 20 19 18 23 23 C 1.38268 * 120.11615 * 359.75751 * 19 18 17 24 24 C 1.38139 * 120.04972 * 359.97438 * 23 19 18 25 25 C 1.53774 * 113.61375 * 247.49842 * 5 4 2 26 26 H 1.08997 * 109.47260 * 180.02562 * 1 2 3 27 27 H 1.09006 * 109.47280 * 300.00094 * 1 2 3 28 28 H 1.08998 * 109.46989 * 59.99892 * 1 2 3 29 29 H 1.08996 * 109.47154 * 240.00003 * 2 1 3 30 30 H 1.08998 * 109.47030 * 180.02562 * 3 2 1 31 31 H 1.08998 * 109.47263 * 299.99940 * 3 2 1 32 32 H 1.08996 * 109.47090 * 59.99963 * 3 2 1 33 33 H 1.08996 * 113.61607 * 25.43345 * 7 5 4 34 34 H 1.08999 * 113.61697 * 254.53237 * 7 5 4 35 35 H 0.96994 * 119.99786 * 24.99761 * 10 8 7 36 36 H 1.09002 * 109.46835 * 304.99631 * 13 11 10 37 37 H 1.09004 * 109.46944 * 300.00128 * 14 13 11 38 38 H 1.09002 * 109.47289 * 60.00035 * 14 13 11 39 39 H 1.09002 * 109.47388 * 179.97438 * 14 13 11 40 40 H 1.08002 * 120.02877 * 0.02562 * 17 16 15 41 41 H 1.08000 * 119.97538 * 180.23294 * 18 17 16 42 42 H 1.08995 * 109.47866 * 125.02188 * 20 19 18 43 43 H 0.96701 * 113.99713 * 180.02562 * 21 20 19 44 44 H 1.48495 * 110.00421 * 178.68562 * 22 20 19 45 45 H 1.48500 * 110.00017 * 300.00656 * 22 20 19 46 46 H 1.07994 * 119.97458 * 179.97438 * 23 19 18 47 47 H 1.08011 * 120.02696 * 179.97438 * 24 23 19 48 48 H 1.08995 * 113.61926 * 105.47743 * 25 5 4 49 49 H 1.08998 * 113.61524 * 334.56474 * 25 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 8 2.0064 -0.6736 1.1668 5 6 2.2001 -2.0782 0.9886 6 1 2.2731 -2.3657 -0.0603 7 6 3.3194 -2.6619 1.8668 8 6 2.4062 -3.8800 2.0841 9 1 2.5358 -4.6618 1.3358 10 7 2.4312 -4.3950 3.4553 11 6 2.1216 -5.6844 3.6966 12 8 1.8218 -6.4181 2.7785 13 6 2.1468 -6.2141 5.1072 14 6 1.0662 -5.5146 5.9340 15 8 1.8987 -7.6213 5.0920 16 6 2.3749 -8.3431 6.1405 17 6 2.9736 -7.6983 7.2131 18 6 3.4520 -8.4338 8.2801 19 6 3.3441 -9.8123 8.2747 20 6 3.8721 -10.6127 9.4374 21 8 4.9598 -11.4291 8.9987 22 14 4.4636 -9.4543 10.7712 23 6 2.7529 -10.4577 7.2043 24 6 2.2680 -9.7263 6.1375 25 6 1.2205 -2.9429 1.7995 26 1 -0.3633 -1.0276 0.0005 27 1 -0.3634 0.5139 0.8900 28 1 -0.3633 0.5138 -0.8900 29 1 1.8933 -0.5138 -0.8899 30 1 3.1300 1.4425 -0.0005 31 1 1.6767 1.9563 -0.8900 32 1 1.6767 1.9563 0.8899 33 1 3.5059 -2.0885 2.7748 34 1 4.2312 -2.8925 1.3159 35 1 2.6706 -3.8081 4.1895 36 1 3.1242 -6.0222 5.5499 37 1 1.2555 -4.4411 5.9456 38 1 0.0888 -5.7064 5.4913 39 1 1.0841 -5.8980 6.9542 40 1 3.0614 -6.6219 7.2160 41 1 3.9148 -7.9321 9.1170 42 1 3.0783 -11.2466 9.8324 43 1 5.3495 -11.9733 9.6967 44 1 4.9574 -10.2312 11.9364 45 1 5.5461 -8.5845 10.2451 46 1 2.6703 -11.5345 7.2023 47 1 1.8066 -10.2309 5.3014 48 1 0.4379 -3.4004 1.1944 49 1 0.8332 -2.4463 2.6892 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10905398_10157680.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:12:35 Heat of formation + Delta-G solvation = -94.001955 kcal Electronic energy + Delta-G solvation = -28536.318186 eV Core-core repulsion = 24431.609902 eV Total energy + Delta-G solvation = -4104.708283 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.182 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -41.79767 -41.03395 -40.01090 -38.92642 -37.83962 -37.27139 -34.78569 -33.40154 -32.68387 -31.83834 -31.51740 -28.22942 -26.82034 -26.80405 -26.09181 -24.75778 -23.85627 -22.44440 -22.19841 -21.44542 -20.98921 -19.48788 -18.56554 -18.42741 -18.21148 -17.17800 -16.85559 -16.76345 -16.69699 -16.38817 -15.90193 -15.71472 -15.59563 -15.33875 -15.28319 -14.93420 -14.57428 -14.26749 -14.01514 -13.94405 -13.82380 -13.65542 -13.57925 -13.53750 -13.44720 -13.40336 -13.16585 -12.89872 -12.69275 -12.35708 -12.29240 -12.18796 -12.04387 -11.94719 -11.85226 -11.66363 -11.63418 -10.77774 -10.48633 -10.47200 -10.12683 -9.97793 -9.14661 -4.99028 0.33567 0.35958 1.27340 1.47616 1.48484 1.57119 1.93267 2.41711 2.66233 2.74788 3.31201 3.37494 3.43529 3.47708 3.59314 3.70564 3.77494 3.79288 3.81092 3.83777 3.91457 3.94393 4.08395 4.19094 4.24544 4.28502 4.31222 4.38381 4.47656 4.55345 4.59081 4.63424 4.63981 4.69933 4.72310 4.80717 4.84635 4.88788 4.91925 4.92201 5.00340 5.01837 5.21706 5.22314 5.23694 5.30805 5.39514 5.56753 5.72933 6.25237 6.29952 6.41001 6.45198 7.09284 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.176 4.176 2 C 0.079 3.921 3 C -0.152 4.152 4 O -0.365 6.365 5 C 0.067 3.933 6 H 0.092 0.908 7 C -0.144 4.144 8 C 0.125 3.875 9 H 0.120 0.880 10 N -0.714 5.714 11 C 0.520 3.480 12 O -0.512 6.512 13 C 0.066 3.934 14 C -0.177 4.177 15 O -0.283 6.283 16 C 0.135 3.865 17 C -0.208 4.208 18 C -0.073 4.073 19 C -0.111 4.111 20 C -0.071 4.071 21 O -0.536 6.536 22 Si 0.681 3.319 23 C -0.050 4.050 24 C -0.146 4.146 25 C -0.167 4.167 26 H 0.057 0.943 27 H 0.063 0.937 28 H 0.065 0.935 29 H 0.061 0.939 30 H 0.061 0.939 31 H 0.070 0.930 32 H 0.064 0.936 33 H 0.097 0.903 34 H 0.082 0.918 35 H 0.403 0.597 36 H 0.100 0.900 37 H 0.079 0.921 38 H 0.077 0.923 39 H 0.080 0.920 40 H 0.134 0.866 41 H 0.130 0.870 42 H 0.075 0.925 43 H 0.379 0.621 44 H -0.262 1.262 45 H -0.256 1.256 46 H 0.133 0.867 47 H 0.136 0.864 48 H 0.076 0.924 49 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.809 4.386 2.884 5.311 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.233 4.233 2 C 0.022 3.978 3 C -0.209 4.209 4 O -0.284 6.284 5 C 0.008 3.992 6 H 0.110 0.890 7 C -0.182 4.182 8 C 0.020 3.980 9 H 0.138 0.862 10 N -0.367 5.367 11 C 0.305 3.695 12 O -0.385 6.385 13 C 0.005 3.995 14 C -0.235 4.235 15 O -0.196 6.196 16 C 0.090 3.910 17 C -0.226 4.226 18 C -0.091 4.091 19 C -0.111 4.111 20 C -0.181 4.181 21 O -0.344 6.344 22 Si 0.583 3.417 23 C -0.068 4.068 24 C -0.165 4.165 25 C -0.206 4.206 26 H 0.076 0.924 27 H 0.083 0.917 28 H 0.084 0.916 29 H 0.079 0.921 30 H 0.080 0.920 31 H 0.089 0.911 32 H 0.083 0.917 33 H 0.116 0.884 34 H 0.101 0.899 35 H 0.238 0.762 36 H 0.118 0.882 37 H 0.098 0.902 38 H 0.096 0.904 39 H 0.099 0.901 40 H 0.151 0.849 41 H 0.147 0.853 42 H 0.093 0.907 43 H 0.227 0.773 44 H -0.187 1.187 45 H -0.181 1.181 46 H 0.150 0.850 47 H 0.154 0.846 48 H 0.094 0.906 49 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -0.568 4.417 2.127 4.935 hybrid contribution 0.750 -0.734 0.193 1.067 sum 0.182 3.683 2.320 4.357 Atomic orbital electron populations 1.22331 0.95782 1.02475 1.02734 1.22217 0.93850 0.93948 0.87781 1.21884 1.01833 0.94443 1.02733 1.87975 1.85673 1.19099 1.35649 1.23455 0.95962 0.81207 0.98544 0.89010 1.23639 0.97858 0.95300 1.01411 1.22254 0.96789 0.94753 0.84202 0.86234 1.45763 1.70774 1.10605 1.09545 1.20131 0.77099 0.82219 0.90074 1.90773 1.45492 1.56802 1.45465 1.22199 1.01392 0.81275 0.94586 1.22357 0.99341 1.00862 1.00916 1.86231 1.73105 1.18265 1.41974 1.19072 0.93707 0.91514 0.86726 1.21174 1.05759 1.00474 0.95216 1.20759 0.97741 0.93072 0.97538 1.19146 1.02218 0.93027 0.96721 1.24735 0.91858 0.99443 1.02060 1.86606 1.49649 1.59006 1.39112 0.95137 0.87495 0.82250 0.76847 1.20832 0.94479 1.00044 0.91455 1.20513 1.04722 0.90580 1.00640 1.24032 0.97911 0.97028 1.01658 0.92403 0.91749 0.91591 0.92078 0.91951 0.91129 0.91722 0.88421 0.89930 0.76170 0.88196 0.90182 0.90422 0.90102 0.84857 0.85287 0.90664 0.77333 1.18690 1.18082 0.84954 0.84639 0.90571 0.88654 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.13 9.53 37.16 0.35 0.49 16 2 C 0.08 -0.04 3.33 -26.73 -0.09 -0.12 16 3 C -0.15 0.14 9.56 37.16 0.36 0.50 16 4 O -0.37 -0.28 10.00 -35.23 -0.35 -0.63 16 5 C 0.07 -0.06 4.27 -25.92 -0.11 -0.17 16 6 H 0.09 -0.16 7.45 -51.93 -0.39 -0.55 16 7 C -0.14 0.26 7.66 -25.92 -0.20 0.06 16 8 C 0.12 -0.09 4.24 -67.12 -0.28 -0.37 16 9 H 0.12 0.10 7.46 -51.93 -0.39 -0.29 16 10 N -0.71 0.84 5.32 -53.02 -0.28 0.55 16 11 C 0.52 1.02 7.18 -10.99 -0.08 0.94 16 12 O -0.51 -3.45 16.11 -14.31 -0.23 -3.68 16 13 C 0.07 0.00 2.64 -27.89 -0.07 -0.07 16 14 C -0.18 0.39 9.12 37.16 0.34 0.73 16 15 O -0.28 -0.96 9.34 -39.30 -0.37 -1.33 16 16 C 0.14 0.33 6.60 -39.22 -0.26 0.07 16 17 C -0.21 -0.11 8.23 -39.43 -0.32 -0.44 16 18 C -0.07 -0.05 8.66 -39.60 -0.34 -0.39 16 19 C -0.11 -0.17 5.39 -104.60 -0.56 -0.73 16 20 C -0.07 -0.01 2.79 36.01 0.10 0.09 16 21 O -0.54 -0.81 12.81 -35.23 -0.45 -1.26 16 22 Si 0.68 -0.62 29.85 -169.99 -5.07 -5.69 16 23 C -0.05 -0.09 9.68 -39.61 -0.38 -0.48 16 24 C -0.15 -0.37 9.99 -39.43 -0.39 -0.76 16 25 C -0.17 0.12 7.71 -25.92 -0.20 -0.08 16 26 H 0.06 -0.03 8.14 -51.93 -0.42 -0.46 16 27 H 0.06 -0.01 8.14 -51.93 -0.42 -0.43 16 28 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 29 H 0.06 -0.08 7.42 -51.93 -0.39 -0.46 16 30 H 0.06 -0.05 8.14 -51.93 -0.42 -0.47 16 31 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 32 H 0.06 -0.03 8.14 -51.93 -0.42 -0.45 16 33 H 0.10 -0.21 8.12 -51.93 -0.42 -0.63 16 34 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 35 H 0.40 -1.65 8.51 -40.82 -0.35 -1.99 16 36 H 0.10 -0.22 6.31 -51.93 -0.33 -0.55 16 37 H 0.08 -0.36 7.93 -51.93 -0.41 -0.78 16 38 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 39 H 0.08 -0.22 6.91 -51.93 -0.36 -0.58 16 40 H 0.13 -0.28 5.43 -52.49 -0.29 -0.57 16 41 H 0.13 -0.16 4.86 -52.49 -0.26 -0.42 16 42 H 0.08 -0.12 7.96 -51.93 -0.41 -0.53 16 43 H 0.38 -0.95 8.74 45.56 0.40 -0.55 16 44 H -0.26 -0.30 7.11 56.52 0.40 0.10 16 45 H -0.26 -0.53 7.05 56.52 0.40 -0.14 16 46 H 0.13 0.09 8.06 -52.49 -0.42 -0.33 16 47 H 0.14 0.26 8.06 -52.48 -0.42 -0.17 16 48 H 0.08 -0.01 8.14 -51.93 -0.42 -0.44 16 49 H 0.09 -0.05 8.14 -51.93 -0.42 -0.48 16 LS Contribution 398.78 15.07 6.01 6.01 Total: 0.00 -9.30 398.78 -10.76 -20.06 By element: Atomic # 1 Polarization: -5.46 SS G_CDS: -7.86 Total: -13.31 kcal Atomic # 6 Polarization: 1.43 SS G_CDS: -2.15 Total: -0.72 kcal Atomic # 7 Polarization: 0.84 SS G_CDS: -0.28 Total: 0.55 kcal Atomic # 8 Polarization: -5.50 SS G_CDS: -1.40 Total: -6.90 kcal Atomic # 14 Polarization: -0.62 SS G_CDS: -5.07 Total: -5.69 kcal Total LS contribution 6.01 Total: 6.01 kcal Total: -9.30 -10.76 -20.06 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10905398_10157680.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -73.944 kcal (2) G-P(sol) polarization free energy of solvation -9.301 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -83.245 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.757 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.058 kcal (6) G-S(sol) free energy of system = (1) + (5) -94.002 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds