Wall clock time and date at job start Sat Mar 6 2021 13:12:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.53000 * 109.47149 * 2 1 4 4 O 1.42905 * 109.47157 * 119.99809 * 2 1 3 5 5 C 1.42905 * 113.99659 * 89.99901 * 4 2 1 6 6 H 1.09003 * 112.84858 * 18.80518 * 5 4 2 7 7 C 1.53780 * 113.61107 * 149.99920 * 5 4 2 8 8 C 1.53783 * 87.08122 * 139.98190 * 7 5 4 9 9 H 1.08996 * 113.61238 * 89.19447 * 8 7 5 10 10 N 1.46497 * 113.61480 * 220.01981 * 8 7 5 11 11 C 1.34778 * 119.99951 * 204.99926 * 10 8 7 12 12 O 1.21289 * 119.99646 * 359.97438 * 11 10 8 13 13 C 1.50694 * 120.00019 * 180.02562 * 11 10 8 14 14 C 1.52996 * 109.47471 * 64.99874 * 13 11 10 15 15 O 1.42904 * 109.46964 * 185.00004 * 13 11 10 16 16 C 1.35906 * 116.99606 * 155.32254 * 15 13 11 17 17 C 1.38728 * 120.05890 * 5.08131 * 16 15 13 18 18 C 1.38146 * 119.94480 * 179.74090 * 17 16 15 19 19 C 1.38269 * 120.05128 * 0.51570 * 18 17 16 20 20 C 1.50700 * 119.94151 * 179.74678 * 19 18 17 21 21 O 1.42908 * 109.46631 * 245.01906 * 20 19 18 22 22 Si 1.86299 * 109.47475 * 5.01369 * 20 19 18 23 23 C 1.38268 * 120.11615 * 359.75751 * 19 18 17 24 24 C 1.38139 * 120.04972 * 359.97438 * 23 19 18 25 25 C 1.53774 * 113.61375 * 247.49842 * 5 4 2 26 26 H 1.08997 * 109.47260 * 180.02562 * 1 2 3 27 27 H 1.09006 * 109.47280 * 300.00094 * 1 2 3 28 28 H 1.08998 * 109.46989 * 59.99892 * 1 2 3 29 29 H 1.08996 * 109.47154 * 240.00003 * 2 1 3 30 30 H 1.08998 * 109.47030 * 180.02562 * 3 2 1 31 31 H 1.08998 * 109.47263 * 299.99940 * 3 2 1 32 32 H 1.08996 * 109.47090 * 59.99963 * 3 2 1 33 33 H 1.08996 * 113.61607 * 25.43345 * 7 5 4 34 34 H 1.08999 * 113.61697 * 254.53237 * 7 5 4 35 35 H 0.96994 * 119.99786 * 24.99761 * 10 8 7 36 36 H 1.09002 * 109.46835 * 304.99631 * 13 11 10 37 37 H 1.09004 * 109.46944 * 300.00128 * 14 13 11 38 38 H 1.09002 * 109.47289 * 60.00035 * 14 13 11 39 39 H 1.09002 * 109.47388 * 179.97438 * 14 13 11 40 40 H 1.08002 * 120.02877 * 0.02562 * 17 16 15 41 41 H 1.08000 * 119.97538 * 180.23294 * 18 17 16 42 42 H 1.08995 * 109.47866 * 125.02188 * 20 19 18 43 43 H 0.96701 * 113.99713 * 180.02562 * 21 20 19 44 44 H 1.48495 * 110.00421 * 178.68562 * 22 20 19 45 45 H 1.48500 * 110.00017 * 300.00656 * 22 20 19 46 46 H 1.07994 * 119.97458 * 179.97438 * 23 19 18 47 47 H 1.08011 * 120.02696 * 179.97438 * 24 23 19 48 48 H 1.08995 * 113.61926 * 105.47743 * 25 5 4 49 49 H 1.08998 * 113.61524 * 334.56474 * 25 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 8 2.0064 -0.6736 1.1668 5 6 2.2001 -2.0782 0.9886 6 1 2.2731 -2.3657 -0.0603 7 6 3.3194 -2.6619 1.8668 8 6 2.4062 -3.8800 2.0841 9 1 2.5358 -4.6618 1.3358 10 7 2.4312 -4.3950 3.4553 11 6 2.1216 -5.6844 3.6966 12 8 1.8218 -6.4181 2.7785 13 6 2.1468 -6.2141 5.1072 14 6 1.0662 -5.5146 5.9340 15 8 1.8987 -7.6213 5.0920 16 6 2.3749 -8.3431 6.1405 17 6 2.9736 -7.6983 7.2131 18 6 3.4520 -8.4338 8.2801 19 6 3.3441 -9.8123 8.2747 20 6 3.8721 -10.6127 9.4374 21 8 4.9598 -11.4291 8.9987 22 14 4.4636 -9.4543 10.7712 23 6 2.7529 -10.4577 7.2043 24 6 2.2680 -9.7263 6.1375 25 6 1.2205 -2.9429 1.7995 26 1 -0.3633 -1.0276 0.0005 27 1 -0.3634 0.5139 0.8900 28 1 -0.3633 0.5138 -0.8900 29 1 1.8933 -0.5138 -0.8899 30 1 3.1300 1.4425 -0.0005 31 1 1.6767 1.9563 -0.8900 32 1 1.6767 1.9563 0.8899 33 1 3.5059 -2.0885 2.7748 34 1 4.2312 -2.8925 1.3159 35 1 2.6706 -3.8081 4.1895 36 1 3.1242 -6.0222 5.5499 37 1 1.2555 -4.4411 5.9456 38 1 0.0888 -5.7064 5.4913 39 1 1.0841 -5.8980 6.9542 40 1 3.0614 -6.6219 7.2160 41 1 3.9148 -7.9321 9.1170 42 1 3.0783 -11.2466 9.8324 43 1 5.3495 -11.9733 9.6967 44 1 4.9574 -10.2312 11.9364 45 1 5.5461 -8.5845 10.2451 46 1 2.6703 -11.5345 7.2023 47 1 1.8066 -10.2309 5.3014 48 1 0.4379 -3.4004 1.1944 49 1 0.8332 -2.4463 2.6892 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10905398_10157680.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:12:34 Heat of formation + Delta-G solvation = -93.212049 kcal Electronic energy + Delta-G solvation = -28536.283933 eV Core-core repulsion = 24431.609902 eV Total energy + Delta-G solvation = -4104.674031 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.182 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -41.86985 -41.05591 -40.06040 -38.99138 -37.85238 -37.32863 -34.86639 -33.36623 -32.67294 -31.88252 -31.53615 -28.15469 -26.79711 -26.73444 -26.09896 -24.73054 -23.90121 -22.42905 -22.21749 -21.49751 -20.96148 -19.53151 -18.59286 -18.43488 -18.22976 -17.24957 -16.87781 -16.80880 -16.67500 -16.38333 -15.90370 -15.73190 -15.65686 -15.38956 -15.26902 -14.98752 -14.60981 -14.27381 -14.02097 -13.95368 -13.79017 -13.66786 -13.53844 -13.48660 -13.37085 -13.30041 -13.09373 -12.90111 -12.65156 -12.37315 -12.25138 -12.21340 -11.99941 -11.89882 -11.87959 -11.67864 -11.60236 -10.92562 -10.46373 -10.44648 -10.16780 -10.04765 -9.23028 -4.91548 0.25194 0.29384 1.32233 1.36215 1.46788 1.61660 1.95884 2.42448 2.60256 2.79735 3.37785 3.43100 3.48267 3.53016 3.66241 3.77343 3.79396 3.82766 3.85660 3.87933 3.97405 3.98321 4.15069 4.26433 4.27442 4.33251 4.36085 4.42753 4.60273 4.63593 4.66852 4.71173 4.72286 4.72683 4.81097 4.88413 4.92163 4.93628 4.95495 4.99110 5.04520 5.10631 5.18127 5.23930 5.28345 5.31118 5.41843 5.49395 5.68056 6.24062 6.34814 6.43054 6.60479 7.05650 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C 0.074 3.926 3 C -0.150 4.150 4 O -0.379 6.379 5 C 0.064 3.936 6 H 0.098 0.902 7 C -0.131 4.131 8 C 0.121 3.879 9 H 0.101 0.899 10 N -0.695 5.695 11 C 0.517 3.483 12 O -0.570 6.570 13 C 0.063 3.937 14 C -0.172 4.172 15 O -0.312 6.312 16 C 0.121 3.879 17 C -0.202 4.202 18 C -0.077 4.077 19 C -0.123 4.123 20 C -0.085 4.085 21 O -0.561 6.561 22 Si 0.768 3.232 23 C -0.060 4.060 24 C -0.166 4.166 25 C -0.163 4.163 26 H 0.053 0.947 27 H 0.056 0.944 28 H 0.074 0.926 29 H 0.069 0.931 30 H 0.060 0.940 31 H 0.081 0.919 32 H 0.057 0.943 33 H 0.107 0.893 34 H 0.089 0.911 35 H 0.420 0.580 36 H 0.127 0.873 37 H 0.109 0.891 38 H 0.058 0.942 39 H 0.091 0.909 40 H 0.163 0.837 41 H 0.150 0.850 42 H 0.092 0.908 43 H 0.394 0.606 44 H -0.289 1.289 45 H -0.294 1.294 46 H 0.137 0.863 47 H 0.129 0.871 48 H 0.066 0.934 49 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.277 5.875 4.239 7.250 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.231 4.231 2 C 0.017 3.983 3 C -0.207 4.207 4 O -0.299 6.299 5 C 0.006 3.994 6 H 0.116 0.884 7 C -0.169 4.169 8 C 0.016 3.984 9 H 0.119 0.881 10 N -0.349 5.349 11 C 0.303 3.697 12 O -0.448 6.448 13 C 0.003 3.997 14 C -0.229 4.229 15 O -0.226 6.226 16 C 0.076 3.924 17 C -0.220 4.220 18 C -0.095 4.095 19 C -0.123 4.123 20 C -0.193 4.193 21 O -0.371 6.371 22 Si 0.674 3.326 23 C -0.078 4.078 24 C -0.184 4.184 25 C -0.203 4.203 26 H 0.072 0.928 27 H 0.076 0.924 28 H 0.093 0.907 29 H 0.087 0.913 30 H 0.079 0.921 31 H 0.100 0.900 32 H 0.076 0.924 33 H 0.125 0.875 34 H 0.107 0.893 35 H 0.259 0.741 36 H 0.145 0.855 37 H 0.127 0.873 38 H 0.077 0.923 39 H 0.110 0.890 40 H 0.180 0.820 41 H 0.167 0.833 42 H 0.110 0.890 43 H 0.244 0.756 44 H -0.216 1.216 45 H -0.222 1.222 46 H 0.154 0.846 47 H 0.147 0.853 48 H 0.085 0.915 49 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges -0.042 5.932 3.505 6.890 hybrid contribution 0.609 -1.195 -0.250 1.364 sum 0.567 4.738 3.255 5.776 Atomic orbital electron populations 1.22312 0.95720 1.02249 1.02826 1.22337 0.93962 0.94238 0.87809 1.21885 1.01699 0.94198 1.02968 1.87950 1.85797 1.19725 1.36383 1.23540 0.96172 0.80641 0.99089 0.88379 1.23572 0.97555 0.94153 1.01648 1.22192 0.97555 0.94602 0.84047 0.88092 1.45645 1.69268 1.09900 1.10054 1.20597 0.76109 0.82574 0.90415 1.90746 1.48428 1.58404 1.47235 1.22448 1.03561 0.80036 0.93624 1.22375 0.97494 1.02413 1.00653 1.86195 1.73604 1.20021 1.42760 1.19224 0.94423 0.91512 0.87275 1.21458 1.04444 1.01918 0.94198 1.21041 0.97397 0.92876 0.98168 1.19436 1.02097 0.93814 0.97003 1.25028 0.92278 1.00107 1.01926 1.86559 1.50186 1.59656 1.40680 0.94174 0.85021 0.79532 0.73921 1.20943 0.94820 1.00369 0.91660 1.20630 1.05578 0.91283 1.00958 1.23987 0.97670 0.96943 1.01652 0.92776 0.92443 0.90695 0.91292 0.92122 0.90034 0.92358 0.87464 0.89266 0.74123 0.85543 0.87277 0.92266 0.89014 0.81985 0.83319 0.88965 0.75600 1.21628 1.22199 0.84563 0.85334 0.91524 0.88516 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 0.26 9.53 71.98 0.69 0.94 16 2 C 0.07 -0.08 3.33 30.59 0.10 0.02 16 3 C -0.15 0.33 9.56 71.98 0.69 1.01 16 4 O -0.38 -0.47 10.00 -148.98 -1.49 -1.96 16 5 C 0.06 -0.12 4.27 31.12 0.13 0.01 16 6 H 0.10 -0.33 7.45 -2.39 -0.02 -0.35 16 7 C -0.13 0.55 7.66 31.12 0.24 0.79 16 8 C 0.12 -0.11 4.24 45.52 0.19 0.08 16 9 H 0.10 0.34 7.46 -2.39 -0.02 0.32 16 10 N -0.70 1.79 5.32 -440.03 -2.34 -0.55 16 11 C 0.52 2.42 7.18 87.66 0.63 3.05 16 12 O -0.57 -9.03 16.11 15.93 0.26 -8.77 16 13 C 0.06 -0.01 2.64 29.85 0.08 0.07 16 14 C -0.17 0.95 9.12 71.98 0.66 1.60 16 15 O -0.31 -2.50 9.34 -73.50 -0.69 -3.19 16 16 C 0.12 0.68 6.60 22.51 0.15 0.83 16 17 C -0.20 -0.03 8.23 22.36 0.18 0.15 16 18 C -0.08 -0.03 8.66 22.26 0.19 0.17 16 19 C -0.12 -0.36 5.39 -19.85 -0.11 -0.47 16 20 C -0.09 0.02 2.79 71.24 0.20 0.22 16 21 O -0.56 -1.67 12.81 -148.98 -1.91 -3.58 16 22 Si 0.77 -2.12 29.85 68.60 2.05 -0.07 16 23 C -0.06 -0.29 9.68 22.25 0.22 -0.07 16 24 C -0.17 -1.12 9.99 22.37 0.22 -0.90 16 25 C -0.16 0.17 7.71 31.12 0.24 0.41 16 26 H 0.05 -0.04 8.14 -2.39 -0.02 -0.06 16 27 H 0.06 0.00 8.14 -2.38 -0.02 -0.02 16 28 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16 29 H 0.07 -0.20 7.42 -2.39 -0.02 -0.22 16 30 H 0.06 -0.11 8.14 -2.39 -0.02 -0.13 16 31 H 0.08 -0.37 8.14 -2.39 -0.02 -0.39 16 32 H 0.06 -0.05 8.14 -2.39 -0.02 -0.07 16 33 H 0.11 -0.63 8.12 -2.39 -0.02 -0.65 16 34 H 0.09 -0.45 8.14 -2.39 -0.02 -0.47 16 35 H 0.42 -4.09 8.51 -92.71 -0.79 -4.88 16 36 H 0.13 -0.76 6.31 -2.39 -0.02 -0.78 16 37 H 0.11 -1.26 7.93 -2.39 -0.02 -1.28 16 38 H 0.06 -0.07 8.14 -2.39 -0.02 -0.09 16 39 H 0.09 -0.67 6.91 -2.39 -0.02 -0.68 16 40 H 0.16 -1.09 5.43 -2.91 -0.02 -1.10 16 41 H 0.15 -0.64 4.86 -2.91 -0.01 -0.65 16 42 H 0.09 -0.36 7.96 -2.39 -0.02 -0.38 16 43 H 0.39 -2.02 8.74 -74.06 -0.65 -2.67 16 44 H -0.29 -0.49 7.11 99.48 0.71 0.22 16 45 H -0.29 -1.08 7.05 99.48 0.70 -0.38 16 46 H 0.14 0.38 8.06 -2.91 -0.02 0.36 16 47 H 0.13 0.87 8.06 -2.91 -0.02 0.85 16 48 H 0.07 0.06 8.14 -2.39 -0.02 0.04 16 49 H 0.10 -0.12 8.14 -2.39 -0.02 -0.14 16 Total: 0.00 -24.21 398.78 0.14 -24.07 By element: Atomic # 1 Polarization: -13.44 SS G_CDS: -0.44 Total: -13.88 kcal Atomic # 6 Polarization: 3.22 SS G_CDS: 4.70 Total: 7.92 kcal Atomic # 7 Polarization: 1.79 SS G_CDS: -2.34 Total: -0.55 kcal Atomic # 8 Polarization: -13.67 SS G_CDS: -3.83 Total: -17.50 kcal Atomic # 14 Polarization: -2.12 SS G_CDS: 2.05 Total: -0.07 kcal Total: -24.21 0.14 -24.07 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10905398_10157680.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -69.144 kcal (2) G-P(sol) polarization free energy of solvation -24.207 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -93.351 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.139 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.068 kcal (6) G-S(sol) free energy of system = (1) + (5) -93.212 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds