Wall clock time and date at job start Sat Mar 6 2021 13:12:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 C 1.52994 * 109.47033 * 2 1 4 4 O 1.42897 * 109.47103 * 119.99826 * 2 1 3 5 5 C 1.42896 * 114.00189 * 150.00086 * 4 2 1 6 6 H 1.09005 * 112.84565 * 341.19502 * 5 4 2 7 7 C 1.53777 * 113.61849 * 112.50238 * 5 4 2 8 8 C 1.53781 * 87.08290 * 139.98331 * 7 5 4 9 9 H 1.09003 * 113.68862 * 89.12891 * 8 7 5 10 10 N 1.46503 * 113.61526 * 220.01946 * 8 7 5 11 11 C 1.34765 * 119.99921 * 252.50055 * 10 8 7 12 12 O 1.21693 * 120.00465 * 5.20603 * 11 10 8 13 13 C 1.46684 * 119.99960 * 185.20864 * 11 10 8 14 14 C 1.37870 * 126.23298 * 5.63499 * 13 11 10 15 15 C 1.39833 * 107.08873 * 180.14100 * 14 13 11 16 16 C 1.50692 * 126.07257 * 179.87553 * 15 14 13 17 17 O 1.42903 * 109.47077 * 299.71578 * 16 15 14 18 18 Si 1.86295 * 109.47526 * 179.71507 * 16 15 14 19 19 C 1.35456 * 107.85980 * 359.61498 * 15 14 13 20 20 N 1.35526 * 108.87396 * 0.23865 * 19 15 14 21 21 C 1.46506 * 125.67769 * 180.02562 * 20 19 15 22 22 C 1.53778 * 113.61578 * 210.00552 * 5 4 2 23 23 H 1.09001 * 109.47281 * 300.00119 * 1 2 3 24 24 H 1.08998 * 109.47044 * 59.99961 * 1 2 3 25 25 H 1.08999 * 109.47288 * 180.02562 * 1 2 3 26 26 H 1.08993 * 109.46968 * 240.00055 * 2 1 3 27 27 H 1.09001 * 109.47184 * 59.99821 * 3 2 1 28 28 H 1.08996 * 109.47116 * 179.97438 * 3 2 1 29 29 H 1.09001 * 109.47307 * 300.00449 * 3 2 1 30 30 H 1.09006 * 113.61144 * 25.43321 * 7 5 4 31 31 H 1.09003 * 113.61455 * 254.53548 * 7 5 4 32 32 H 0.96998 * 119.99499 * 72.49132 * 10 8 7 33 33 H 1.08000 * 126.45511 * 0.02562 * 14 13 11 34 34 H 1.09006 * 109.46985 * 59.71209 * 16 15 14 35 35 H 0.96696 * 113.99831 * 299.99739 * 17 16 15 36 36 H 1.48498 * 110.00361 * 179.97438 * 18 16 15 37 37 H 1.48505 * 110.00171 * 301.31886 * 18 16 15 38 38 H 1.08002 * 125.56071 * 180.28049 * 19 15 14 39 39 H 1.08998 * 109.47456 * 85.93070 * 21 20 19 40 40 H 1.09001 * 109.47059 * 205.92609 * 21 20 19 41 41 H 1.08994 * 109.47043 * 325.92334 * 21 20 19 42 42 H 1.08999 * 113.62125 * 105.47365 * 22 5 4 43 43 H 1.08998 * 113.69031 * 334.56785 * 22 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 8 2.0064 -0.6736 1.1668 5 6 3.2660 -1.3244 0.9887 6 1 3.5127 -1.4892 -0.0602 7 6 4.4078 -0.6892 1.7995 8 6 4.8960 -2.1194 2.0841 9 1 5.5900 -2.5022 1.3358 10 7 5.3734 -2.3146 3.4553 11 6 6.6921 -2.4524 3.6966 12 8 7.4935 -2.3204 2.7904 13 6 7.1614 -2.7617 5.0514 14 6 6.3690 -3.0442 6.1437 15 6 7.2259 -3.2738 7.2246 16 6 6.8077 -3.6166 8.6312 17 8 6.0014 -2.5613 9.1590 18 14 8.3222 -3.8321 9.6944 19 6 8.4988 -3.1391 6.7816 20 7 8.4734 -2.8280 5.4627 21 6 9.6469 -2.6007 4.6157 22 6 3.4432 -2.5743 1.8668 23 1 -0.3634 0.5138 0.8900 24 1 -0.3633 0.5138 -0.8900 25 1 -0.3634 -1.0276 0.0005 26 1 1.8933 -0.5138 -0.8899 27 1 1.6766 1.9563 0.8900 28 1 3.1300 1.4425 0.0005 29 1 1.6766 1.9563 -0.8899 30 1 4.0687 -0.1584 2.6892 31 1 5.1000 -0.1037 1.1943 32 1 4.7402 -2.3446 4.1896 33 1 5.2897 -3.0795 6.1616 34 1 6.2339 -4.5434 8.6240 35 1 6.4489 -1.7049 9.1951 36 1 7.9232 -4.1698 11.0843 37 1 9.1848 -4.9053 9.1381 38 1 9.3888 -3.2605 7.3813 39 1 10.0046 -3.5541 4.2269 40 1 9.3749 -1.9489 3.7854 41 1 10.4342 -2.1298 5.2043 42 1 3.3568 -3.5109 1.3159 43 1 2.8409 -2.5604 2.7752 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10905398_10803934.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:12:41 Heat of formation + Delta-G solvation = -38.882910 kcal Electronic energy + Delta-G solvation = -23757.454652 eV Core-core repulsion = 20192.156551 eV Total energy + Delta-G solvation = -3565.298102 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.162 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -42.54149 -41.02600 -39.62071 -37.87682 -37.59432 -34.78203 -33.74046 -32.92215 -30.78516 -28.35642 -28.19706 -26.76295 -26.01143 -25.36358 -23.30272 -22.33411 -21.28419 -21.13100 -20.25901 -18.78734 -18.25460 -17.66220 -16.83484 -16.81210 -16.66809 -16.34057 -15.98764 -15.68580 -15.44585 -15.25681 -15.17174 -14.93985 -14.38831 -14.05727 -13.94679 -13.66816 -13.52693 -13.50691 -13.40203 -13.29041 -13.18415 -13.12830 -12.65870 -12.26313 -12.19624 -11.99739 -11.91322 -11.90022 -11.63201 -10.98235 -10.44853 -10.32461 -10.08836 -9.67723 -9.24399 -5.01981 0.45065 1.35858 1.51690 1.56756 1.69357 2.01965 2.26116 2.36126 2.77888 3.39563 3.50807 3.58814 3.71390 3.78501 3.79529 3.84286 3.92044 3.94348 4.11226 4.18907 4.22062 4.26102 4.31287 4.38834 4.60873 4.65520 4.66406 4.67342 4.69372 4.76066 4.78450 4.83943 4.87486 4.92480 4.95851 5.06647 5.18947 5.24804 5.26370 5.45466 5.68413 5.90734 6.12454 6.32900 6.47323 6.70537 7.17202 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.152 4.152 2 C 0.080 3.920 3 C -0.176 4.176 4 O -0.365 6.365 5 C 0.067 3.933 6 H 0.092 0.908 7 C -0.167 4.167 8 C 0.127 3.873 9 H 0.119 0.881 10 N -0.706 5.706 11 C 0.593 3.407 12 O -0.548 6.548 13 C -0.055 4.055 14 C -0.112 4.112 15 C -0.208 4.208 16 C -0.030 4.030 17 O -0.543 6.543 18 Si 0.684 3.316 19 C 0.026 3.974 20 N -0.404 5.404 21 C 0.062 3.938 22 C -0.144 4.144 23 H 0.064 0.936 24 H 0.070 0.930 25 H 0.061 0.939 26 H 0.061 0.939 27 H 0.064 0.936 28 H 0.057 0.943 29 H 0.065 0.935 30 H 0.095 0.905 31 H 0.075 0.925 32 H 0.406 0.594 33 H 0.146 0.854 34 H 0.110 0.890 35 H 0.377 0.623 36 H -0.256 1.256 37 H -0.258 1.258 38 H 0.173 0.827 39 H 0.078 0.922 40 H 0.106 0.894 41 H 0.086 0.914 42 H 0.082 0.918 43 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.919 1.869 -0.730 2.207 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.209 4.209 2 C 0.022 3.978 3 C -0.233 4.233 4 O -0.284 6.284 5 C 0.009 3.991 6 H 0.109 0.891 7 C -0.206 4.206 8 C 0.022 3.978 9 H 0.136 0.864 10 N -0.356 5.356 11 C 0.381 3.619 12 O -0.427 6.427 13 C -0.168 4.168 14 C -0.138 4.138 15 C -0.214 4.214 16 C -0.142 4.142 17 O -0.348 6.348 18 Si 0.586 3.414 19 C -0.110 4.110 20 N -0.076 5.076 21 C -0.079 4.079 22 C -0.183 4.183 23 H 0.083 0.917 24 H 0.089 0.911 25 H 0.081 0.919 26 H 0.079 0.921 27 H 0.083 0.917 28 H 0.076 0.924 29 H 0.084 0.916 30 H 0.114 0.886 31 H 0.094 0.906 32 H 0.241 0.759 33 H 0.163 0.837 34 H 0.128 0.872 35 H 0.225 0.775 36 H -0.180 1.180 37 H -0.183 1.183 38 H 0.190 0.810 39 H 0.097 0.903 40 H 0.124 0.876 41 H 0.104 0.896 42 H 0.100 0.900 43 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges 1.731 0.982 -0.928 2.196 hybrid contribution -0.492 -0.274 -0.259 0.620 sum 1.239 0.707 -1.187 1.856 Atomic orbital electron populations 1.21887 0.93493 1.02805 1.02727 1.22210 0.95118 0.92668 0.87784 1.22330 1.01574 0.96694 1.02727 1.87980 1.35629 1.69152 1.35606 1.23456 0.84099 0.93120 0.98473 0.89054 1.24030 0.97645 0.97264 1.01646 1.22232 0.94849 0.96639 0.84045 0.86353 1.45547 1.06832 1.73756 1.09497 1.16996 0.82662 0.76047 0.86177 1.90792 1.54042 1.51780 1.46068 1.20022 0.84110 1.17540 0.95110 1.21190 0.98905 1.03132 0.90587 1.19788 0.92487 1.12226 0.96933 1.24314 1.03882 0.92904 0.93142 1.86480 1.42857 1.20467 1.85009 0.95056 0.79157 0.88171 0.78990 1.21862 0.98952 1.06029 0.84206 1.43813 1.05767 1.49574 1.08420 1.22376 0.85621 1.03989 0.95886 1.23646 0.95054 0.98101 1.01451 0.91705 0.91147 0.91945 0.92113 0.91729 0.92419 0.91619 0.88638 0.90633 0.75853 0.83679 0.87227 0.77545 1.18037 1.18265 0.81010 0.90304 0.87561 0.89571 0.89951 0.88362 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.09 9.56 37.16 0.36 0.44 16 2 C 0.08 -0.01 3.33 -26.73 -0.09 -0.10 16 3 C -0.18 0.08 9.53 37.15 0.35 0.43 16 4 O -0.36 -0.47 10.00 -35.23 -0.35 -0.82 16 5 C 0.07 -0.03 4.27 -25.92 -0.11 -0.14 16 6 H 0.09 -0.14 7.45 -51.93 -0.39 -0.53 16 7 C -0.17 0.03 7.71 -25.92 -0.20 -0.17 16 8 C 0.13 -0.02 4.21 -67.11 -0.28 -0.30 16 9 H 0.12 0.10 7.53 -51.93 -0.39 -0.29 16 10 N -0.71 -0.13 5.33 -54.32 -0.29 -0.42 16 11 C 0.59 1.62 7.77 -12.86 -0.10 1.52 16 12 O -0.55 -2.95 14.29 5.19 0.07 -2.87 16 13 C -0.05 -0.11 6.89 -81.98 -0.56 -0.68 16 14 C -0.11 -0.11 10.28 -39.12 -0.40 -0.52 16 15 C -0.21 -0.10 5.44 -105.02 -0.57 -0.67 16 16 C -0.03 0.00 3.02 36.00 0.11 0.11 16 17 O -0.54 -0.23 12.88 -35.23 -0.45 -0.69 16 18 Si 0.68 -0.85 30.59 -169.99 -5.20 -6.05 16 19 C 0.03 0.00 9.94 -16.91 -0.17 -0.17 16 20 N -0.40 -0.45 3.16 -120.23 -0.38 -0.83 16 21 C 0.06 -0.04 10.64 59.85 0.64 0.60 16 22 C -0.14 0.17 7.66 -25.92 -0.20 -0.03 16 23 H 0.06 0.00 8.14 -51.93 -0.42 -0.42 16 24 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 25 H 0.06 -0.02 8.14 -51.93 -0.42 -0.45 16 26 H 0.06 -0.06 7.42 -51.93 -0.39 -0.45 16 27 H 0.06 0.01 8.14 -51.93 -0.42 -0.41 16 28 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 29 H 0.06 -0.09 8.14 -51.93 -0.42 -0.51 16 30 H 0.10 0.04 8.14 -51.93 -0.42 -0.38 16 31 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 32 H 0.41 -0.68 7.68 -40.82 -0.31 -0.99 16 33 H 0.15 -0.07 7.49 -52.49 -0.39 -0.46 16 34 H 0.11 0.06 7.96 -51.93 -0.41 -0.35 16 35 H 0.38 -1.24 8.70 45.56 0.40 -0.85 16 36 H -0.26 -0.57 7.11 56.52 0.40 -0.16 16 37 H -0.26 -0.25 7.11 56.52 0.40 0.15 16 38 H 0.17 -0.51 6.19 -52.49 -0.32 -0.83 16 39 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 40 H 0.11 0.11 6.21 -51.93 -0.32 -0.21 16 41 H 0.09 -0.28 8.14 -51.93 -0.42 -0.70 16 42 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 43 H 0.10 -0.12 8.12 -51.93 -0.42 -0.54 16 LS Contribution 355.02 15.07 5.35 5.35 Total: 0.00 -7.58 355.02 -9.29 -16.87 By element: Atomic # 1 Polarization: -4.05 SS G_CDS: -6.80 Total: -10.85 kcal Atomic # 6 Polarization: 1.55 SS G_CDS: -1.23 Total: 0.32 kcal Atomic # 7 Polarization: -0.59 SS G_CDS: -0.67 Total: -1.26 kcal Atomic # 8 Polarization: -3.65 SS G_CDS: -0.73 Total: -4.38 kcal Atomic # 14 Polarization: -0.85 SS G_CDS: -5.20 Total: -6.05 kcal Total LS contribution 5.35 Total: 5.35 kcal Total: -7.58 -9.29 -16.87 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10905398_10803934.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -22.016 kcal (2) G-P(sol) polarization free energy of solvation -7.581 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -29.597 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.286 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.867 kcal (6) G-S(sol) free energy of system = (1) + (5) -38.883 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds