Wall clock time and date at job start Sat Mar 6 2021 13:13:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 C 1.52992 * 109.47488 * 2 1 4 4 O 1.42900 * 109.46968 * 120.00422 * 2 1 3 5 5 C 1.42893 * 114.00730 * 90.00026 * 4 2 1 6 6 H 1.09009 * 112.84542 * 341.19280 * 5 4 2 7 7 C 1.53779 * 113.61865 * 112.49717 * 5 4 2 8 8 C 1.53783 * 87.07897 * 139.98334 * 7 5 4 9 9 H 1.09007 * 113.68859 * 89.13186 * 8 7 5 10 10 N 1.46497 * 113.61394 * 220.01731 * 8 7 5 11 11 C 1.34776 * 120.00249 * 252.50007 * 10 8 7 12 12 O 1.21566 * 120.00099 * 0.02562 * 11 10 8 13 13 C 1.47727 * 120.00117 * 179.97438 * 11 10 8 14 14 C 1.39708 * 120.02310 * 179.97438 * 13 11 10 15 15 C 1.37667 * 119.97073 * 180.02562 * 14 13 11 16 16 C 1.39502 * 120.02851 * 0.02867 * 15 14 13 17 17 C 1.48276 * 119.97660 * 179.97438 * 16 15 14 18 18 C 1.39399 * 120.12762 * 179.97438 * 17 16 15 19 19 C 1.37998 * 119.87391 * 179.97438 * 18 17 16 20 20 C 1.38337 * 120.12291 * 359.97326 * 19 18 17 21 21 C 1.50706 * 119.86668 * 180.02562 * 20 19 18 22 22 O 1.42903 * 109.47186 * 65.00384 * 21 20 19 23 23 Si 1.86302 * 109.46768 * 185.00064 * 21 20 19 24 24 C 1.38327 * 120.25768 * 0.28033 * 20 19 18 25 25 C 1.37998 * 120.13031 * 359.48861 * 24 20 19 26 26 C 1.39510 * 120.04579 * 0.22762 * 16 15 14 27 27 C 1.37662 * 120.02183 * 359.48952 * 26 16 15 28 28 C 1.53776 * 87.08581 * 334.56935 * 8 7 5 29 29 H 1.09000 * 109.47138 * 59.99771 * 1 2 3 30 30 H 1.09000 * 109.46825 * 180.02562 * 1 2 3 31 31 H 1.08999 * 109.46929 * 299.99962 * 1 2 3 32 32 H 1.09008 * 109.46935 * 239.99804 * 2 1 3 33 33 H 1.08999 * 109.47744 * 180.02562 * 3 2 1 34 34 H 1.09010 * 109.46968 * 300.00350 * 3 2 1 35 35 H 1.08996 * 109.47083 * 59.99557 * 3 2 1 36 36 H 1.08996 * 113.61115 * 25.43528 * 7 5 4 37 37 H 1.09004 * 113.61436 * 254.52979 * 7 5 4 38 38 H 0.96999 * 119.99764 * 72.50279 * 10 8 7 39 39 H 1.07997 * 120.01344 * 0.02562 * 14 13 11 40 40 H 1.08004 * 119.97969 * 180.02562 * 15 14 13 41 41 H 1.08002 * 120.06246 * 359.95311 * 18 17 16 42 42 H 1.07999 * 119.94051 * 180.02562 * 19 18 17 43 43 H 1.08992 * 109.47155 * 304.99981 * 21 20 19 44 44 H 0.96698 * 113.99763 * 59.99746 * 22 21 20 45 45 H 1.48503 * 109.99841 * 58.68268 * 23 21 20 46 46 H 1.48504 * 109.99775 * 180.02562 * 23 21 20 47 47 H 1.08008 * 119.93523 * 179.72420 * 24 20 19 48 48 H 1.07997 * 120.07055 * 180.25556 * 25 24 20 49 49 H 1.07995 * 119.98113 * 179.74495 * 26 16 15 50 50 H 1.08000 * 120.01075 * 180.27586 * 27 26 16 51 51 H 1.09000 * 113.61926 * 139.97866 * 28 8 7 52 52 H 1.09000 * 113.61268 * 270.89086 * 28 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4424 0.0000 4 8 2.0063 -0.6737 1.1667 5 6 2.2001 -2.0782 0.9887 6 1 1.6626 -2.4737 0.1267 7 6 3.6751 -2.5091 1.0479 8 6 3.2022 -3.7393 1.8403 9 1 2.9398 -4.5905 1.2120 10 7 4.0911 -4.1017 2.9470 11 6 4.8684 -5.1989 2.8554 12 8 4.8323 -5.8876 1.8543 13 6 5.7651 -5.5640 3.9712 14 6 6.5707 -6.7016 3.8770 15 6 7.4056 -7.0411 4.9177 16 6 7.4470 -6.2502 6.0661 17 6 8.3462 -6.6173 7.1864 18 6 8.3904 -5.8290 8.3352 19 6 9.2289 -6.1758 9.3750 20 6 10.0240 -7.3037 9.2790 21 6 10.9371 -7.6774 10.4183 22 8 10.1543 -8.0124 11.5659 23 14 11.9762 -9.1433 9.9260 24 6 9.9882 -8.0869 8.1394 25 6 9.1501 -7.7525 7.0952 26 6 6.6390 -5.1171 6.1633 27 6 5.8077 -4.7724 5.1215 28 6 1.9909 -2.8968 2.2736 29 1 -0.3633 0.5139 -0.8900 30 1 -0.3633 -1.0277 0.0005 31 1 -0.3633 0.5138 0.8900 32 1 1.8934 -0.5139 -0.8900 33 1 3.1301 1.4424 -0.0005 34 1 1.6767 1.9563 -0.8900 35 1 1.6767 1.9562 0.8899 36 1 4.3046 -1.8327 1.6262 37 1 4.0981 -2.7535 0.0735 38 1 4.1201 -3.5520 3.7456 39 1 6.5385 -7.3143 2.9883 40 1 8.0287 -7.9203 4.8448 41 1 7.7700 -4.9482 8.4112 42 1 9.2637 -5.5660 10.2657 43 1 11.5866 -6.8347 10.6548 44 1 9.5516 -8.7558 11.4276 45 1 12.7713 -8.8183 8.7145 46 1 12.8806 -9.5222 11.0412 47 1 10.6145 -8.9639 8.0682 48 1 9.1199 -8.3670 6.2076 49 1 6.6689 -4.5078 7.0545 50 1 5.1856 -3.8927 5.1952 51 1 1.0543 -3.4542 2.2887 52 1 2.1601 -2.3265 3.1869 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10905398_13158362.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:13:58 Heat of formation + Delta-G solvation = -36.780168 kcal Electronic energy + Delta-G solvation = -31069.548471 eV Core-core repulsion = 26773.099141 eV Total energy + Delta-G solvation = -4296.449330 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.182 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -41.57578 -40.97066 -40.19888 -39.15531 -37.86016 -37.52085 -34.73299 -33.92784 -32.95483 -32.57102 -31.63743 -30.79933 -28.21662 -27.21744 -26.81846 -25.55834 -24.73389 -24.04016 -22.66518 -22.41747 -22.15381 -21.33273 -21.04880 -19.19327 -18.44956 -18.35305 -17.76950 -17.09095 -16.81843 -16.61600 -16.36479 -16.13492 -15.98809 -15.76163 -15.73839 -15.48681 -15.15246 -15.03570 -14.98757 -14.81499 -14.39661 -14.32686 -14.11799 -14.08994 -13.66133 -13.60744 -13.55968 -13.31949 -13.21773 -13.11043 -12.80403 -12.65496 -12.58679 -12.33325 -12.11458 -12.04504 -12.00057 -11.85441 -11.67748 -11.63208 -10.91732 -10.78452 -10.45808 -10.44652 -10.11818 -10.06503 -10.04351 -9.12171 -5.07936 -0.71601 0.28549 0.32005 0.48019 1.24209 1.59420 1.83904 1.93720 2.02403 2.57600 2.74951 2.96600 3.32549 3.38716 3.44547 3.48212 3.52510 3.62519 3.73033 3.76845 3.78559 3.82061 3.89766 3.94611 3.95215 4.07204 4.17558 4.20454 4.21806 4.27472 4.30627 4.43172 4.55913 4.61681 4.62065 4.64272 4.66467 4.73738 4.78732 4.81867 4.84472 4.86362 4.91429 4.94016 4.97642 5.03768 5.09006 5.13440 5.21854 5.22971 5.24537 5.35024 5.41779 5.46977 5.58450 5.74527 5.84062 6.30681 6.44751 6.51354 7.18090 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.176 4.176 2 C 0.079 3.921 3 C -0.151 4.151 4 O -0.366 6.366 5 C 0.067 3.933 6 H 0.092 0.908 7 C -0.168 4.168 8 C 0.124 3.876 9 H 0.120 0.880 10 N -0.714 5.714 11 C 0.561 3.439 12 O -0.534 6.534 13 C -0.137 4.137 14 C -0.054 4.054 15 C -0.118 4.118 16 C -0.017 4.017 17 C -0.049 4.049 18 C -0.105 4.105 19 C -0.090 4.090 20 C -0.114 4.114 21 C -0.069 4.069 22 O -0.539 6.539 23 Si 0.685 3.315 24 C -0.113 4.113 25 C -0.100 4.100 26 C -0.118 4.118 27 C -0.081 4.081 28 C -0.144 4.144 29 H 0.066 0.934 30 H 0.056 0.944 31 H 0.064 0.936 32 H 0.061 0.939 33 H 0.061 0.939 34 H 0.070 0.930 35 H 0.064 0.936 36 H 0.094 0.906 37 H 0.076 0.924 38 H 0.402 0.598 39 H 0.140 0.860 40 H 0.135 0.865 41 H 0.129 0.871 42 H 0.129 0.871 43 H 0.114 0.886 44 H 0.379 0.621 45 H -0.257 1.257 46 H -0.254 1.254 47 H 0.130 0.870 48 H 0.132 0.868 49 H 0.133 0.867 50 H 0.128 0.872 51 H 0.082 0.918 52 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.072 0.366 0.433 2.149 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.234 4.234 2 C 0.022 3.978 3 C -0.208 4.208 4 O -0.285 6.285 5 C 0.008 3.992 6 H 0.110 0.890 7 C -0.207 4.207 8 C 0.019 3.981 9 H 0.138 0.862 10 N -0.365 5.365 11 C 0.349 3.651 12 O -0.412 6.412 13 C -0.140 4.140 14 C -0.073 4.073 15 C -0.136 4.136 16 C -0.018 4.018 17 C -0.049 4.049 18 C -0.122 4.122 19 C -0.108 4.108 20 C -0.114 4.114 21 C -0.180 4.180 22 O -0.345 6.345 23 Si 0.587 3.413 24 C -0.131 4.131 25 C -0.118 4.118 26 C -0.136 4.136 27 C -0.100 4.100 28 C -0.182 4.182 29 H 0.085 0.915 30 H 0.075 0.925 31 H 0.083 0.917 32 H 0.079 0.921 33 H 0.080 0.920 34 H 0.089 0.911 35 H 0.083 0.917 36 H 0.113 0.887 37 H 0.094 0.906 38 H 0.238 0.762 39 H 0.158 0.842 40 H 0.153 0.847 41 H 0.147 0.853 42 H 0.147 0.853 43 H 0.131 0.869 44 H 0.227 0.773 45 H -0.182 1.182 46 H -0.179 1.179 47 H 0.147 0.853 48 H 0.150 0.850 49 H 0.151 0.849 50 H 0.146 0.854 51 H 0.100 0.900 52 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges -0.924 0.162 0.001 0.938 hybrid contribution -0.152 0.916 0.166 0.943 sum -1.077 1.078 0.167 1.532 Atomic orbital electron populations 1.22334 0.95822 1.02404 1.02812 1.22174 0.93698 0.93959 0.88005 1.21871 1.01840 0.94400 1.02709 1.87982 1.85812 1.19091 1.35583 1.23420 0.95864 0.81779 0.98138 0.89022 1.24031 0.97669 0.97396 1.01650 1.22234 0.90030 0.96701 0.89132 0.86205 1.45823 1.42531 1.27750 1.20433 1.18307 0.79760 0.80314 0.86745 1.90793 1.67047 1.51676 1.31639 1.19973 1.00564 0.98340 0.95107 1.21231 0.92664 0.94710 0.98645 1.21247 0.99521 1.00117 0.92707 1.18994 0.94940 0.94630 0.93197 1.18818 0.96763 0.95710 0.93604 1.21317 0.98754 0.99450 0.92729 1.20975 0.95198 0.96155 0.98514 1.20455 0.98877 0.96296 0.95814 1.25076 0.97784 1.08253 0.86917 1.86514 1.57895 1.55754 1.34291 0.94761 0.82191 0.84347 0.79967 1.20940 0.99265 0.99349 0.93522 1.21229 0.95384 0.96301 0.98896 1.21163 0.96379 0.96883 0.99175 1.21203 0.97845 0.98509 0.92451 1.23627 0.98463 0.97034 0.99054 0.91532 0.92480 0.91691 0.92088 0.91969 0.91135 0.91723 0.88733 0.90569 0.76227 0.84213 0.84731 0.85289 0.85305 0.86862 0.77320 1.18194 1.17881 0.85264 0.85006 0.84903 0.85398 0.89954 0.88512 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.14 9.53 37.16 0.35 0.49 16 2 C 0.08 -0.01 3.22 -26.73 -0.09 -0.10 16 3 C -0.15 0.09 9.56 37.15 0.36 0.45 16 4 O -0.37 -0.42 10.00 -35.23 -0.35 -0.77 16 5 C 0.07 -0.03 4.13 -25.92 -0.11 -0.14 16 6 H 0.09 -0.13 7.77 -51.92 -0.40 -0.54 16 7 C -0.17 0.03 7.71 -25.92 -0.20 -0.17 16 8 C 0.12 -0.02 4.24 -67.12 -0.28 -0.30 16 9 H 0.12 0.12 7.46 -51.92 -0.39 -0.26 16 10 N -0.71 0.10 5.30 -54.00 -0.29 -0.19 16 11 C 0.56 1.44 7.77 -12.38 -0.10 1.34 16 12 O -0.53 -3.29 15.93 5.31 0.08 -3.20 16 13 C -0.14 -0.16 5.88 -104.92 -0.62 -0.78 16 14 C -0.05 -0.06 9.58 -39.24 -0.38 -0.44 16 15 C -0.12 0.00 9.41 -39.32 -0.37 -0.37 16 16 C -0.02 0.00 5.88 -104.82 -0.62 -0.62 16 17 C -0.05 0.00 5.88 -104.90 -0.62 -0.62 16 18 C -0.10 0.04 9.43 -39.24 -0.37 -0.33 16 19 C -0.09 0.01 9.67 -39.63 -0.38 -0.38 16 20 C -0.11 0.04 5.36 -104.55 -0.56 -0.52 16 21 C -0.07 0.04 2.80 36.01 0.10 0.14 16 22 O -0.54 0.03 12.83 -35.23 -0.45 -0.42 16 23 Si 0.69 -0.88 29.79 -169.99 -5.06 -5.94 16 24 C -0.11 0.11 8.65 -39.64 -0.34 -0.23 16 25 C -0.10 0.07 9.43 -39.24 -0.37 -0.30 16 26 C -0.12 0.09 9.41 -39.32 -0.37 -0.28 16 27 C -0.08 0.07 9.52 -39.24 -0.37 -0.30 16 28 C -0.14 0.19 7.66 -25.92 -0.20 -0.01 16 29 H 0.07 -0.10 8.14 -51.93 -0.42 -0.53 16 30 H 0.06 -0.05 8.14 -51.93 -0.42 -0.47 16 31 H 0.06 -0.01 8.14 -51.93 -0.42 -0.43 16 32 H 0.06 -0.05 7.73 -51.92 -0.40 -0.45 16 33 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 34 H 0.07 -0.12 8.14 -51.92 -0.42 -0.54 16 35 H 0.06 -0.01 8.14 -51.93 -0.42 -0.43 16 36 H 0.09 0.02 8.14 -51.93 -0.42 -0.40 16 37 H 0.08 0.02 8.14 -51.93 -0.42 -0.41 16 38 H 0.40 -1.03 6.74 -40.82 -0.28 -1.30 16 39 H 0.14 0.18 7.64 -52.49 -0.40 -0.23 16 40 H 0.13 -0.27 6.19 -52.48 -0.32 -0.59 16 41 H 0.13 -0.28 6.19 -52.49 -0.33 -0.60 16 42 H 0.13 -0.09 8.06 -52.49 -0.42 -0.51 16 43 H 0.11 -0.01 7.96 -51.93 -0.41 -0.43 16 44 H 0.38 -1.46 8.70 45.56 0.40 -1.07 16 45 H -0.26 -0.29 7.11 56.52 0.40 0.11 16 46 H -0.25 -0.52 7.11 56.52 0.40 -0.12 16 47 H 0.13 -0.37 4.89 -52.48 -0.26 -0.63 16 48 H 0.13 -0.34 6.19 -52.49 -0.33 -0.66 16 49 H 0.13 -0.36 6.19 -52.49 -0.32 -0.69 16 50 H 0.13 -0.45 6.39 -52.49 -0.34 -0.79 16 51 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 52 H 0.10 -0.15 8.12 -51.93 -0.42 -0.57 16 LS Contribution 422.26 15.07 6.36 6.36 Total: 0.00 -8.34 422.26 -12.86 -21.19 By element: Atomic # 1 Polarization: -5.93 SS G_CDS: -7.62 Total: -13.55 kcal Atomic # 6 Polarization: 2.05 SS G_CDS: -5.53 Total: -3.48 kcal Atomic # 7 Polarization: 0.10 SS G_CDS: -0.29 Total: -0.19 kcal Atomic # 8 Polarization: -3.67 SS G_CDS: -0.72 Total: -4.39 kcal Atomic # 14 Polarization: -0.88 SS G_CDS: -5.06 Total: -5.94 kcal Total LS contribution 6.36 Total: 6.36 kcal Total: -8.34 -12.86 -21.19 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10905398_13158362.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -15.587 kcal (2) G-P(sol) polarization free energy of solvation -8.336 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -23.923 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.857 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.193 kcal (6) G-S(sol) free energy of system = (1) + (5) -36.780 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.22 seconds