Wall clock time and date at job start Sat Mar 6 2021 13:15:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 C 1.53000 * 109.47132 * 2 1 4 4 O 1.42903 * 109.46840 * 119.99631 * 2 1 3 5 5 C 1.42903 * 114.00084 * 149.99842 * 4 2 1 6 6 H 1.09011 * 112.84420 * 341.19976 * 5 4 2 7 7 C 1.53958 * 113.66518 * 112.43585 * 5 4 2 8 8 C 1.53782 * 87.01631 * 139.93743 * 7 5 4 9 9 H 1.08999 * 113.61369 * 89.22884 * 8 7 5 10 10 N 1.46504 * 113.61473 * 220.05331 * 8 7 5 11 11 C 1.34772 * 119.99606 * 254.13450 * 10 8 7 12 12 O 1.21631 * 120.00215 * 0.02562 * 11 10 8 13 13 C 1.47264 * 120.00035 * 179.97438 * 11 10 8 14 14 C 1.36332 * 126.97000 * 179.71215 * 13 11 10 15 15 C 1.50995 * 126.79417 * 0.30401 * 14 13 11 16 16 C 1.53388 * 108.25262 * 164.28665 * 15 14 13 17 17 C 1.53159 * 109.04029 * 48.48123 * 16 15 14 18 18 C 1.53135 * 109.53095 * 290.42814 * 17 16 15 19 19 N 1.35214 * 108.66327 * 180.28514 * 14 13 11 20 20 C 1.36429 * 109.89570 * 359.97438 * 19 14 13 21 21 C 1.50696 * 125.49493 * 180.02562 * 20 19 14 22 22 O 1.42905 * 109.47304 * 29.96653 * 21 20 19 23 23 Si 1.86300 * 109.47435 * 149.96817 * 21 20 19 24 24 C 1.34492 * 109.01503 * 0.02562 * 20 19 14 25 25 C 1.53773 * 113.61729 * 210.00225 * 5 4 2 26 26 H 1.08998 * 109.47367 * 300.00419 * 1 2 3 27 27 H 1.09001 * 109.46887 * 60.00297 * 1 2 3 28 28 H 1.08996 * 109.47139 * 180.02562 * 1 2 3 29 29 H 1.08998 * 109.47367 * 239.99581 * 2 1 3 30 30 H 1.09005 * 109.46868 * 180.02562 * 3 2 1 31 31 H 1.09001 * 109.46992 * 299.99639 * 3 2 1 32 32 H 1.08998 * 109.47336 * 59.99562 * 3 2 1 33 33 H 1.09000 * 113.61022 * 25.42375 * 7 5 4 34 34 H 1.08992 * 113.66645 * 254.46437 * 7 5 4 35 35 H 0.96998 * 119.99757 * 74.13761 * 10 8 7 36 36 H 1.09004 * 109.70610 * 283.97562 * 15 14 13 37 37 H 1.09005 * 109.70756 * 44.59370 * 15 14 13 38 38 H 1.08995 * 109.54582 * 168.35057 * 16 15 14 39 39 H 1.08999 * 109.53928 * 288.52922 * 16 15 14 40 40 H 1.09001 * 109.46475 * 50.44763 * 17 16 15 41 41 H 1.09002 * 109.45950 * 170.41241 * 17 16 15 42 42 H 1.09006 * 109.56249 * 291.14692 * 18 17 16 43 43 H 1.09002 * 109.56346 * 170.80891 * 18 17 16 44 44 H 1.08999 * 109.47072 * 269.97281 * 21 20 19 45 45 H 0.96695 * 114.00319 * 179.97438 * 22 21 20 46 46 H 1.48503 * 109.99830 * 178.67919 * 23 21 20 47 47 H 1.48493 * 110.00070 * 299.99999 * 23 21 20 48 48 H 1.08000 * 126.81929 * 179.97438 * 24 20 19 49 49 H 1.09002 * 113.61629 * 105.46842 * 25 5 4 50 50 H 1.08997 * 113.61229 * 334.56646 * 25 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 8 2.0063 -0.6736 1.1669 5 6 3.2660 -1.3245 0.9888 6 1 3.5127 -1.4893 -0.0602 7 6 4.4103 -0.6884 1.7989 8 6 4.8960 -2.1193 2.0843 9 1 5.5899 -2.5022 1.3360 10 7 5.3732 -2.3146 3.4556 11 6 6.6942 -2.4216 3.7005 12 8 7.4901 -2.3556 2.7831 13 6 7.1740 -2.6173 5.0789 14 6 8.4686 -2.7480 5.4856 15 6 9.6991 -2.7145 4.6111 16 6 10.9229 -2.5042 5.5115 17 6 10.8561 -3.4883 6.6832 18 6 9.7113 -3.0921 7.6200 19 7 8.4859 -2.9164 6.8271 20 6 7.2115 -2.8978 7.3138 21 6 6.8255 -3.0539 8.7621 22 8 7.8709 -2.5425 9.5915 23 14 5.2536 -2.1098 9.0913 24 6 6.3550 -2.7177 6.2926 25 6 3.4431 -2.5743 1.8670 26 1 -0.3634 0.5139 0.8899 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3633 -1.0276 0.0005 29 1 1.8934 -0.5139 -0.8899 30 1 3.1301 1.4424 -0.0005 31 1 1.6767 1.9563 -0.8900 32 1 1.6767 1.9564 0.8899 33 1 4.0723 -0.1566 2.6883 34 1 5.1033 -0.1047 1.1931 35 1 4.7384 -2.3668 4.1871 36 1 9.7949 -3.6588 4.0752 37 1 9.6214 -1.8931 3.8986 38 1 11.8325 -2.6816 4.9378 39 1 10.9248 -1.4826 5.8914 40 1 10.6822 -4.4948 6.3027 41 1 11.7982 -3.4651 7.2311 42 1 9.9581 -2.1568 8.1226 43 1 9.5576 -3.8768 8.3607 44 1 6.6689 -4.1094 8.9846 45 1 7.6901 -2.6102 10.5389 46 1 4.8451 -2.2818 10.5086 47 1 5.4541 -0.6693 8.7917 48 1 5.2783 -2.6589 6.3535 49 1 3.3566 -3.5109 1.3161 50 1 2.8404 -2.5589 2.7750 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10905398_16915396.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:15:06 Heat of formation + Delta-G solvation = -53.341937 kcal Electronic energy + Delta-G solvation = -29548.144841 eV Core-core repulsion = 25542.918370 eV Total energy + Delta-G solvation = -4005.226471 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 335.193 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -42.65071 -40.88896 -39.46857 -38.09227 -37.63429 -36.86527 -34.19357 -33.43386 -32.74614 -31.18150 -29.43085 -28.14198 -26.72492 -26.62478 -25.37207 -24.50651 -23.30098 -22.26992 -21.59286 -21.02225 -20.82555 -19.30273 -18.62884 -18.16660 -18.06069 -16.88644 -16.65386 -16.53918 -16.10522 -15.95316 -15.83849 -15.39524 -15.28462 -15.17309 -15.08616 -14.88207 -14.55415 -14.26367 -14.17689 -13.88065 -13.71679 -13.52385 -13.38807 -13.32774 -13.15152 -13.08042 -12.88196 -12.55395 -12.40720 -12.15861 -12.10612 -12.00924 -11.86781 -11.84761 -11.78896 -11.77851 -11.54699 -10.82287 -10.55904 -10.34119 -9.81147 -9.44516 -8.88858 -5.01938 0.93340 1.02456 1.50813 1.55451 1.83976 2.01331 2.44828 2.76840 2.92924 2.99706 3.52731 3.55899 3.61262 3.66004 3.71945 3.84537 3.85684 3.93526 3.95419 4.01841 4.17940 4.19382 4.28507 4.31521 4.35806 4.39530 4.46219 4.48442 4.62625 4.71518 4.72573 4.75965 4.80909 4.82682 4.85113 4.87681 4.91674 4.93465 4.95835 5.05711 5.07167 5.12116 5.21046 5.22323 5.28872 5.31960 5.34651 5.74626 5.84731 6.16514 6.25108 6.32671 6.42137 6.83925 7.59892 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.152 4.152 2 C 0.080 3.920 3 C -0.176 4.176 4 O -0.365 6.365 5 C 0.066 3.934 6 H 0.090 0.910 7 C -0.168 4.168 8 C 0.128 3.872 9 H 0.117 0.883 10 N -0.715 5.715 11 C 0.597 3.403 12 O -0.550 6.550 13 C -0.234 4.234 14 C 0.119 3.881 15 C -0.055 4.055 16 C -0.129 4.129 17 C -0.140 4.140 18 C 0.114 3.886 19 N -0.424 5.424 20 C 0.034 3.966 21 C -0.051 4.051 22 O -0.542 6.542 23 Si 0.706 3.294 24 C -0.166 4.166 25 C -0.143 4.143 26 H 0.063 0.937 27 H 0.069 0.931 28 H 0.061 0.939 29 H 0.060 0.940 30 H 0.057 0.943 31 H 0.064 0.936 32 H 0.063 0.937 33 H 0.094 0.906 34 H 0.073 0.927 35 H 0.402 0.598 36 H 0.088 0.912 37 H 0.100 0.900 38 H 0.079 0.921 39 H 0.068 0.932 40 H 0.074 0.926 41 H 0.087 0.913 42 H 0.086 0.914 43 H 0.091 0.909 44 H 0.078 0.922 45 H 0.384 0.616 46 H -0.259 1.259 47 H -0.252 1.252 48 H 0.153 0.847 49 H 0.080 0.920 50 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.789 -2.101 1.996 3.406 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.209 4.209 2 C 0.022 3.978 3 C -0.233 4.233 4 O -0.284 6.284 5 C 0.007 3.993 6 H 0.108 0.892 7 C -0.207 4.207 8 C 0.022 3.978 9 H 0.134 0.866 10 N -0.366 5.366 11 C 0.386 3.614 12 O -0.429 6.429 13 C -0.243 4.243 14 C 0.001 3.999 15 C -0.093 4.093 16 C -0.167 4.167 17 C -0.177 4.177 18 C -0.007 4.007 19 N -0.100 5.100 20 C -0.075 4.075 21 C -0.160 4.160 22 O -0.350 6.350 23 Si 0.605 3.395 24 C -0.190 4.190 25 C -0.182 4.182 26 H 0.083 0.917 27 H 0.088 0.912 28 H 0.080 0.920 29 H 0.078 0.922 30 H 0.076 0.924 31 H 0.083 0.917 32 H 0.082 0.918 33 H 0.112 0.888 34 H 0.092 0.908 35 H 0.237 0.763 36 H 0.107 0.893 37 H 0.118 0.882 38 H 0.098 0.902 39 H 0.087 0.913 40 H 0.093 0.907 41 H 0.106 0.894 42 H 0.104 0.896 43 H 0.109 0.891 44 H 0.096 0.904 45 H 0.232 0.768 46 H -0.184 1.184 47 H -0.176 1.176 48 H 0.171 0.829 49 H 0.099 0.901 50 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges -1.146 -1.348 1.651 2.420 hybrid contribution 0.573 -0.057 1.262 1.387 sum -0.573 -1.406 2.912 3.284 Atomic orbital electron populations 1.21883 0.93576 1.02763 1.02655 1.22197 0.95041 0.92655 0.87877 1.22331 1.01622 0.96735 1.02634 1.87974 1.35763 1.69170 1.35510 1.23521 0.83995 0.93281 0.98466 0.89213 1.24061 0.97537 0.97606 1.01487 1.22136 0.94574 0.96104 0.84947 0.86560 1.45643 1.07238 1.74782 1.08894 1.17318 0.81918 0.74994 0.87141 1.90756 1.54829 1.51594 1.45767 1.19774 0.92307 1.19577 0.92661 1.20377 0.95727 1.00702 0.83130 1.20508 0.88306 1.04616 0.95823 1.21722 0.98765 0.99635 0.96562 1.21959 0.98168 1.00487 0.97136 1.22034 0.81851 1.03370 0.93409 1.43817 1.06229 1.54038 1.05893 1.19514 0.83840 1.10896 0.93249 1.24491 1.00808 1.03546 0.87172 1.86531 1.42134 1.85242 1.21077 0.94602 0.80029 0.81256 0.83606 1.21550 0.98130 1.09051 0.90288 1.23620 0.95434 0.97842 1.01270 0.91747 0.91224 0.91954 0.92151 0.92390 0.91705 0.91770 0.88797 0.90838 0.76326 0.89342 0.88182 0.90216 0.91326 0.90726 0.89421 0.89602 0.89104 0.90374 0.76775 1.18384 1.17610 0.82928 0.90129 0.88472 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.05 9.56 37.16 0.36 0.41 16 2 C 0.08 0.02 3.33 -26.73 -0.09 -0.07 16 3 C -0.18 0.00 9.53 37.16 0.35 0.35 16 4 O -0.37 -0.61 10.00 -35.23 -0.35 -0.96 16 5 C 0.07 0.01 4.27 -25.83 -0.11 -0.10 16 6 H 0.09 -0.08 7.45 -51.92 -0.39 -0.46 16 7 C -0.17 -0.12 7.73 -25.82 -0.20 -0.32 16 8 C 0.13 0.10 4.21 -67.11 -0.28 -0.19 16 9 H 0.12 0.22 7.50 -51.93 -0.39 -0.17 16 10 N -0.72 -0.82 5.36 -54.14 -0.29 -1.11 16 11 C 0.60 2.45 7.81 -12.59 -0.10 2.35 16 12 O -0.55 -3.86 14.96 5.25 0.08 -3.79 16 13 C -0.23 -0.80 6.28 -103.48 -0.65 -1.45 16 14 C 0.12 0.40 6.57 -81.64 -0.54 -0.14 16 15 C -0.05 -0.12 5.32 -27.54 -0.15 -0.26 16 16 C -0.13 0.00 5.98 -26.45 -0.16 -0.15 16 17 C -0.14 0.12 5.92 -26.58 -0.16 -0.04 16 18 C 0.11 0.04 5.32 -3.69 -0.02 0.02 16 19 N -0.42 -0.99 3.11 -107.37 -0.33 -1.32 16 20 C 0.03 0.06 6.18 -81.87 -0.51 -0.45 16 21 C -0.05 0.04 2.98 36.00 0.11 0.15 16 22 O -0.54 0.27 10.65 -35.23 -0.38 -0.11 16 23 Si 0.71 -1.05 31.11 -169.99 -5.29 -6.34 16 24 C -0.17 -0.19 9.09 -37.47 -0.34 -0.53 16 25 C -0.14 0.10 7.66 -25.92 -0.20 -0.10 16 26 H 0.06 0.01 8.14 -51.93 -0.42 -0.41 16 27 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 28 H 0.06 -0.01 8.14 -51.93 -0.42 -0.44 16 29 H 0.06 -0.04 7.42 -51.93 -0.39 -0.42 16 30 H 0.06 0.02 8.14 -51.93 -0.42 -0.41 16 31 H 0.06 -0.06 8.14 -51.93 -0.42 -0.48 16 32 H 0.06 0.04 8.14 -51.93 -0.42 -0.38 16 33 H 0.09 0.12 8.14 -51.93 -0.42 -0.30 16 34 H 0.07 0.09 8.14 -51.93 -0.42 -0.34 16 35 H 0.40 -0.47 7.84 -40.82 -0.32 -0.79 16 36 H 0.09 0.18 8.14 -51.93 -0.42 -0.24 16 37 H 0.10 0.33 7.41 -51.93 -0.38 -0.05 16 38 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 39 H 0.07 0.03 8.12 -51.93 -0.42 -0.39 16 40 H 0.07 -0.04 8.11 -51.93 -0.42 -0.46 16 41 H 0.09 -0.21 8.14 -51.93 -0.42 -0.63 16 42 H 0.09 0.06 8.00 -51.93 -0.42 -0.36 16 43 H 0.09 -0.03 7.69 -51.93 -0.40 -0.43 16 44 H 0.08 -0.18 7.96 -51.93 -0.41 -0.60 16 45 H 0.38 -1.66 8.74 45.56 0.40 -1.26 16 46 H -0.26 -0.05 7.11 56.52 0.40 0.35 16 47 H -0.25 -0.64 7.11 56.52 0.40 -0.23 16 48 H 0.15 -0.35 6.52 -52.49 -0.34 -0.70 16 49 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 50 H 0.10 -0.09 8.11 -51.93 -0.42 -0.52 16 LS Contribution 395.72 15.07 5.96 5.96 Total: 0.00 -8.01 395.72 -11.85 -19.86 By element: Atomic # 1 Polarization: -3.10 SS G_CDS: -8.57 Total: -11.67 kcal Atomic # 6 Polarization: 2.15 SS G_CDS: -2.68 Total: -0.53 kcal Atomic # 7 Polarization: -1.81 SS G_CDS: -0.62 Total: -2.43 kcal Atomic # 8 Polarization: -4.20 SS G_CDS: -0.65 Total: -4.85 kcal Atomic # 14 Polarization: -1.05 SS G_CDS: -5.29 Total: -6.34 kcal Total LS contribution 5.96 Total: 5.96 kcal Total: -8.01 -11.85 -19.86 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10905398_16915396.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -33.480 kcal (2) G-P(sol) polarization free energy of solvation -8.014 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -41.494 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.848 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.862 kcal (6) G-S(sol) free energy of system = (1) + (5) -53.342 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds