Wall clock time and date at job start Sat Mar 6 2021 13:16:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35988 * 117.00225 * 2 1 4 4 C 1.39153 * 120.08009 * 179.97438 * 3 2 1 5 5 O 1.35997 * 120.06536 * 359.97438 * 4 3 2 6 6 C 1.42908 * 116.99676 * 179.72104 * 5 4 3 7 7 C 1.50698 * 109.46887 * 179.97438 * 6 5 4 8 8 O 1.21283 * 120.00472 * 0.02562 * 7 6 5 9 9 N 1.34777 * 119.99538 * 180.02562 * 7 6 5 10 10 C 1.46499 * 119.99665 * 179.72653 * 9 7 6 11 11 H 1.09002 * 112.85201 * 24.08188 * 10 9 7 12 12 C 1.53784 * 113.61491 * 155.28109 * 10 9 7 13 13 C 1.53783 * 87.08338 * 139.98310 * 12 10 9 14 14 H 1.08994 * 113.61765 * 89.19652 * 13 12 10 15 15 O 1.42905 * 113.61010 * 220.02199 * 13 12 10 16 16 C 1.42904 * 113.99504 * 209.99644 * 15 13 12 17 17 C 1.53000 * 109.46636 * 149.99919 * 16 15 13 18 18 C 1.52992 * 109.47148 * 269.99906 * 16 15 13 19 19 C 1.53780 * 87.07825 * 334.56565 * 13 12 10 20 20 C 1.38563 * 119.86003 * 179.72383 * 4 3 2 21 21 C 1.38244 * 119.99423 * 0.27334 * 20 4 3 22 22 C 1.38250 * 120.15285 * 0.02562 * 21 20 4 23 23 C 1.50700 * 119.92990 * 179.97438 * 22 21 20 24 24 O 1.42898 * 109.47157 * 244.99785 * 23 22 21 25 25 Si 1.86296 * 109.47105 * 5.00232 * 23 22 21 26 26 C 1.38249 * 120.14199 * 359.97438 * 22 21 20 27 27 H 1.09002 * 109.46984 * 60.00574 * 1 2 3 28 28 H 1.09004 * 109.47103 * 180.02562 * 1 2 3 29 29 H 1.09003 * 109.47402 * 300.00249 * 1 2 3 30 30 H 1.09003 * 109.46467 * 60.00362 * 6 5 4 31 31 H 1.08993 * 109.47113 * 300.00627 * 6 5 4 32 32 H 0.97001 * 120.00485 * 0.02562 * 9 7 6 33 33 H 1.09000 * 113.61044 * 254.52540 * 12 10 9 34 34 H 1.08999 * 113.61555 * 25.34324 * 12 10 9 35 35 H 1.09000 * 109.47076 * 30.00223 * 16 15 13 36 36 H 1.08995 * 109.47279 * 59.99895 * 17 16 15 37 37 H 1.09006 * 109.46674 * 180.02562 * 17 16 15 38 38 H 1.09002 * 109.47061 * 299.99343 * 17 16 15 39 39 H 1.08997 * 109.47479 * 180.02562 * 18 16 15 40 40 H 1.09008 * 109.47099 * 300.00051 * 18 16 15 41 41 H 1.08999 * 109.47354 * 60.00217 * 18 16 15 42 42 H 1.08998 * 113.61772 * 270.88604 * 19 13 12 43 43 H 1.09001 * 113.61751 * 139.98662 * 19 13 12 44 44 H 1.08001 * 120.00293 * 180.25762 * 20 4 3 45 45 H 1.08001 * 119.92494 * 179.97438 * 21 20 4 46 46 H 1.08999 * 109.46708 * 125.00163 * 23 22 21 47 47 H 0.96697 * 113.99683 * 179.97438 * 24 23 22 48 48 H 1.48500 * 110.00180 * 178.67647 * 25 23 22 49 49 H 1.48504 * 110.00035 * 299.99822 * 25 23 22 50 50 H 1.07997 * 119.99594 * 180.02562 * 26 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2116 0.0000 4 6 3.4359 1.2864 0.0005 5 8 4.1795 0.1476 0.0016 6 6 5.6003 0.3006 -0.0041 7 6 6.2518 -1.0582 -0.0014 8 8 5.5670 -2.0592 0.0044 9 7 7.5957 -1.1612 -0.0053 10 6 8.2291 -2.4821 0.0034 11 1 7.5837 -3.2637 -0.3976 12 6 9.6474 -2.4891 -0.5908 13 6 10.0316 -3.4579 0.5400 14 1 9.8808 -4.5071 0.2862 15 8 11.3215 -3.2021 1.0994 16 6 11.9776 -4.3670 1.6039 17 6 13.4925 -4.1942 1.4771 18 6 11.6081 -4.5634 3.0755 19 6 8.8765 -2.8460 1.3501 20 6 4.0603 2.5233 -0.0053 21 6 3.3028 3.6798 -0.0058 22 6 1.9223 3.6058 -0.0001 23 6 1.1016 4.8696 -0.0002 24 8 0.3695 4.9623 1.2235 25 14 2.2302 6.3430 -0.1618 26 6 1.2932 2.3747 0.0057 27 1 -0.3633 0.5138 -0.8901 28 1 -0.3633 -1.0277 0.0005 29 1 -0.3634 0.5139 0.8900 30 1 5.9097 0.8533 0.8830 31 1 5.9033 0.8475 -0.8969 32 1 8.1435 -0.3607 -0.0095 33 1 9.7023 -2.9341 -1.5843 34 1 10.1508 -1.5242 -0.5308 35 1 11.6621 -5.2387 1.0306 36 1 13.8080 -3.3225 2.0503 37 1 13.9930 -5.0830 1.8615 38 1 13.7557 -4.0543 0.4286 39 1 12.1089 -5.4517 3.4605 40 1 11.9237 -3.6916 3.6488 41 1 10.5289 -4.6865 3.1659 42 1 9.1696 -1.9790 1.9420 43 1 8.3090 -3.5790 1.9235 44 1 5.1386 2.5840 -0.0091 45 1 3.7907 4.6433 -0.0099 46 1 0.4060 4.8510 -0.8392 47 1 -0.1820 5.7535 1.2929 48 1 1.4307 7.5940 -0.1953 49 1 3.1836 6.3797 0.9762 50 1 0.2146 2.3197 0.0097 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10905398_60476.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:16:10 Heat of formation + Delta-G solvation = -123.641904 kcal Electronic energy + Delta-G solvation = -30590.836095 eV Core-core repulsion = 26166.160335 eV Total energy + Delta-G solvation = -4424.675760 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.181 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -41.74654 -41.19855 -40.10712 -39.12132 -38.75600 -37.79733 -37.06552 -34.54751 -32.97377 -32.07832 -31.40395 -29.60754 -28.39965 -28.20506 -26.78287 -26.20801 -25.16345 -23.43708 -22.44545 -22.30877 -21.58367 -21.03454 -19.67016 -18.61183 -18.39587 -18.19156 -18.04192 -17.45964 -17.38371 -16.77055 -16.53272 -16.45902 -16.08017 -15.87954 -15.80957 -15.68927 -15.33009 -15.20927 -15.06091 -14.37965 -14.04971 -13.99871 -13.91830 -13.76013 -13.55514 -13.46348 -13.44391 -13.40152 -13.14997 -12.77938 -12.66581 -12.54902 -12.27162 -12.18318 -12.11375 -12.01808 -11.92310 -11.88512 -11.65610 -11.64349 -10.80805 -10.52533 -10.46349 -10.09263 -9.72030 -8.79487 -4.99423 0.23487 0.35759 1.24792 1.47985 1.53247 1.56598 1.92227 2.36484 2.48798 2.58143 2.79913 3.31475 3.36167 3.47790 3.55071 3.71343 3.75518 3.80606 3.83614 3.87122 3.93157 3.97505 3.99649 4.10163 4.18226 4.21081 4.25923 4.30669 4.32218 4.34861 4.46220 4.61144 4.62301 4.65451 4.66119 4.67849 4.74419 4.82700 4.86277 4.91651 4.94214 5.04267 5.04482 5.15346 5.23307 5.25343 5.42511 5.45168 5.60424 6.01629 6.30622 6.38095 6.40559 6.59899 7.14647 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.301 6.301 3 C 0.107 3.893 4 C 0.104 3.896 5 O -0.277 6.277 6 C 0.038 3.962 7 C 0.517 3.483 8 O -0.509 6.509 9 N -0.716 5.716 10 C 0.126 3.874 11 H 0.120 0.880 12 C -0.143 4.143 13 C 0.067 3.933 14 H 0.092 0.908 15 O -0.365 6.365 16 C 0.080 3.920 17 C -0.152 4.152 18 C -0.176 4.176 19 C -0.168 4.168 20 C -0.169 4.169 21 C -0.111 4.111 22 C -0.069 4.069 23 C -0.074 4.074 24 O -0.536 6.536 25 Si 0.685 3.315 26 C -0.145 4.145 27 H 0.056 0.944 28 H 0.103 0.897 29 H 0.056 0.944 30 H 0.094 0.906 31 H 0.096 0.904 32 H 0.404 0.596 33 H 0.082 0.918 34 H 0.097 0.903 35 H 0.061 0.939 36 H 0.064 0.936 37 H 0.070 0.930 38 H 0.061 0.939 39 H 0.065 0.935 40 H 0.063 0.937 41 H 0.057 0.943 42 H 0.095 0.905 43 H 0.075 0.925 44 H 0.140 0.860 45 H 0.133 0.867 46 H 0.076 0.924 47 H 0.380 0.620 48 H -0.261 1.261 49 H -0.254 1.254 50 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.987 2.802 -2.772 4.945 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.214 6.214 3 C 0.061 3.939 4 C 0.059 3.941 5 O -0.189 6.189 6 C -0.041 4.041 7 C 0.302 3.698 8 O -0.383 6.383 9 N -0.369 5.369 10 C 0.021 3.979 11 H 0.138 0.862 12 C -0.182 4.182 13 C 0.008 3.992 14 H 0.110 0.890 15 O -0.284 6.284 16 C 0.022 3.978 17 C -0.209 4.209 18 C -0.233 4.233 19 C -0.207 4.207 20 C -0.188 4.188 21 C -0.129 4.129 22 C -0.069 4.069 23 C -0.184 4.184 24 O -0.343 6.343 25 Si 0.586 3.414 26 C -0.164 4.164 27 H 0.074 0.926 28 H 0.121 0.879 29 H 0.074 0.926 30 H 0.112 0.888 31 H 0.114 0.886 32 H 0.239 0.761 33 H 0.101 0.899 34 H 0.116 0.884 35 H 0.079 0.921 36 H 0.083 0.917 37 H 0.089 0.911 38 H 0.081 0.919 39 H 0.084 0.916 40 H 0.082 0.918 41 H 0.076 0.924 42 H 0.113 0.887 43 H 0.094 0.906 44 H 0.158 0.842 45 H 0.150 0.850 46 H 0.094 0.906 47 H 0.227 0.773 48 H -0.187 1.187 49 H -0.179 1.179 50 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 3.140 2.020 -2.289 4.379 hybrid contribution -0.982 0.710 0.787 1.445 sum 2.158 2.730 -1.502 3.790 Atomic orbital electron populations 1.23125 0.78216 1.04359 1.01315 1.86243 1.21266 1.25336 1.88598 1.18238 0.89007 0.85484 1.01190 1.18266 0.88284 0.85764 1.01829 1.86277 1.16028 1.27727 1.88875 1.22490 0.81311 0.96255 1.04049 1.20067 0.82518 0.90579 0.76641 1.90791 1.62631 1.38037 1.46815 1.45723 1.05838 1.09241 1.76127 1.22240 0.92734 0.85761 0.97162 0.86209 1.23634 0.94362 1.01392 0.98762 1.23459 0.83085 0.98538 0.94100 0.89005 1.87975 1.30095 1.32434 1.77904 1.22215 0.93476 0.87834 0.94268 1.21885 0.93458 1.02735 1.02810 1.22331 1.01963 1.02491 0.96553 1.24042 0.96823 1.02257 0.97613 1.20965 1.00451 0.90584 1.06762 1.20667 0.92686 0.98062 1.01493 1.18924 0.92925 0.93131 1.01923 1.24780 1.00488 1.04044 0.89043 1.86600 1.62569 1.47342 1.37834 0.95011 0.81622 0.75327 0.89419 1.20911 1.00283 0.90449 1.04741 0.92565 0.87893 0.92556 0.88791 0.88628 0.76136 0.89925 0.88415 0.92071 0.91730 0.91138 0.91944 0.91601 0.91760 0.92396 0.88687 0.90585 0.84203 0.84996 0.90604 0.77260 1.18679 1.17912 0.84342 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.02 9.81 101.05 0.99 1.01 16 2 O -0.30 -1.48 10.28 -34.21 -0.35 -1.83 16 3 C 0.11 0.44 6.70 -39.12 -0.26 0.18 16 4 C 0.10 0.36 6.70 -39.12 -0.26 0.10 16 5 O -0.28 -1.24 9.46 -47.36 -0.45 -1.69 16 6 C 0.04 0.00 5.22 36.00 0.19 0.18 16 7 C 0.52 1.09 7.91 -10.99 -0.09 1.00 16 8 O -0.51 -3.69 16.10 -14.35 -0.23 -3.92 16 9 N -0.72 0.80 5.35 -53.01 -0.28 0.52 16 10 C 0.13 -0.06 4.24 -67.12 -0.28 -0.35 16 11 H 0.12 0.12 7.47 -51.93 -0.39 -0.27 16 12 C -0.14 0.25 7.66 -25.92 -0.20 0.05 16 13 C 0.07 -0.05 4.27 -25.92 -0.11 -0.16 16 14 H 0.09 -0.15 7.45 -51.93 -0.39 -0.53 16 15 O -0.37 -0.35 10.00 -35.23 -0.35 -0.70 16 16 C 0.08 -0.02 3.33 -26.74 -0.09 -0.11 16 17 C -0.15 0.12 9.56 37.16 0.36 0.47 16 18 C -0.18 0.09 9.53 37.15 0.35 0.44 16 19 C -0.17 0.07 7.71 -25.92 -0.20 -0.13 16 20 C -0.17 -0.10 9.04 -39.46 -0.36 -0.46 16 21 C -0.11 -0.07 8.66 -39.57 -0.34 -0.41 16 22 C -0.07 -0.11 5.38 -104.61 -0.56 -0.68 16 23 C -0.07 0.00 2.79 36.01 0.10 0.10 16 24 O -0.54 -0.66 12.81 -35.23 -0.45 -1.12 16 25 Si 0.68 -0.78 29.84 -169.99 -5.07 -5.85 16 26 C -0.14 -0.36 8.67 -39.45 -0.34 -0.70 16 27 H 0.06 -0.04 7.68 -51.93 -0.40 -0.44 16 28 H 0.10 -0.07 8.14 -51.93 -0.42 -0.49 16 29 H 0.06 0.00 7.65 -51.93 -0.40 -0.40 16 30 H 0.09 -0.25 7.66 -51.93 -0.40 -0.65 16 31 H 0.10 -0.30 7.66 -51.93 -0.40 -0.70 16 32 H 0.40 -1.72 8.73 -40.82 -0.36 -2.07 16 33 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 34 H 0.10 -0.21 8.12 -51.93 -0.42 -0.63 16 35 H 0.06 -0.07 7.42 -51.93 -0.39 -0.45 16 36 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 37 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 38 H 0.06 -0.04 8.14 -51.93 -0.42 -0.46 16 39 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 40 H 0.06 0.01 8.14 -51.92 -0.42 -0.42 16 41 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 42 H 0.09 -0.01 8.14 -51.93 -0.42 -0.44 16 43 H 0.08 0.02 8.14 -51.93 -0.42 -0.41 16 44 H 0.14 -0.38 6.30 -52.49 -0.33 -0.71 16 45 H 0.13 -0.19 4.85 -52.49 -0.25 -0.45 16 46 H 0.08 -0.13 7.96 -51.93 -0.41 -0.55 16 47 H 0.38 -1.06 8.74 45.56 0.40 -0.67 16 48 H -0.26 -0.23 7.11 56.52 0.40 0.17 16 49 H -0.25 -0.46 7.05 56.52 0.40 -0.06 16 50 H 0.14 0.15 6.30 -52.49 -0.33 -0.18 16 LS Contribution 410.60 15.07 6.19 6.19 Total: 0.00 -11.20 410.60 -10.00 -21.21 By element: Atomic # 1 Polarization: -5.45 SS G_CDS: -7.89 Total: -13.34 kcal Atomic # 6 Polarization: 1.65 SS G_CDS: -1.11 Total: 0.54 kcal Atomic # 7 Polarization: 0.80 SS G_CDS: -0.28 Total: 0.52 kcal Atomic # 8 Polarization: -7.42 SS G_CDS: -1.83 Total: -9.26 kcal Atomic # 14 Polarization: -0.78 SS G_CDS: -5.07 Total: -5.85 kcal Total LS contribution 6.19 Total: 6.19 kcal Total: -11.20 -10.00 -21.21 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10905398_60476.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -102.436 kcal (2) G-P(sol) polarization free energy of solvation -11.205 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -113.640 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.002 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.206 kcal (6) G-S(sol) free energy of system = (1) + (5) -123.642 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.11 seconds