Wall clock time and date at job start Sat Mar 6 2021 13:16:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50694 * 1 3 3 C 1.33812 * 122.44865 * 2 1 4 4 C 1.50700 * 124.52360 * 0.02562 * 3 2 1 5 5 O 1.42903 * 109.46907 * 30.00301 * 4 3 2 6 6 Si 1.86303 * 109.47172 * 150.00202 * 4 3 2 7 7 S 1.70624 * 110.95362 * 179.77866 * 3 2 1 8 8 C 1.75827 * 91.56125 * 0.30526 * 7 3 2 9 9 C 1.46584 * 125.45635 * 179.97438 * 8 7 3 10 10 O 1.21701 * 120.00004 * 179.69298 * 9 8 7 11 11 N 1.34778 * 119.99949 * 359.69529 * 9 8 7 12 12 C 1.46500 * 119.99919 * 180.02562 * 11 9 8 13 13 H 1.09002 * 112.85132 * 25.33083 * 12 11 9 14 14 C 1.53781 * 113.61711 * 156.52821 * 12 11 9 15 15 C 1.53777 * 87.08336 * 140.06028 * 14 12 11 16 16 H 1.09003 * 113.60961 * 89.20081 * 15 14 12 17 17 O 1.42904 * 113.61633 * 220.01738 * 15 14 12 18 18 C 1.42892 * 113.99889 * 210.00190 * 17 15 14 19 19 C 1.52997 * 109.47144 * 90.00290 * 18 17 15 20 20 C 1.53004 * 109.47169 * 209.99987 * 18 17 15 21 21 C 1.53775 * 87.07992 * 334.56762 * 15 14 12 22 22 C 1.36648 * 109.08674 * 359.69655 * 8 7 3 23 23 H 1.08996 * 109.47985 * 270.00387 * 1 2 3 24 24 H 1.08998 * 109.47245 * 30.00857 * 1 2 3 25 25 H 1.09006 * 109.47064 * 150.00042 * 1 2 3 26 26 H 1.08996 * 109.47003 * 269.99899 * 4 3 2 27 27 H 0.96696 * 114.00073 * 60.00672 * 5 4 3 28 28 H 1.48501 * 110.00133 * 58.67936 * 6 4 3 29 29 H 1.48497 * 110.00047 * 179.97438 * 6 4 3 30 30 H 0.96998 * 120.00229 * 359.97438 * 11 9 8 31 31 H 1.08997 * 113.61673 * 254.61577 * 14 12 11 32 32 H 1.09005 * 113.61396 * 25.51405 * 14 12 11 33 33 H 1.08994 * 109.47574 * 330.00062 * 18 17 15 34 34 H 1.08999 * 109.47522 * 59.99575 * 19 18 17 35 35 H 1.09001 * 109.47266 * 179.97438 * 19 18 17 36 36 H 1.09000 * 109.47450 * 300.00026 * 19 18 17 37 37 H 1.09005 * 109.46697 * 59.99887 * 20 18 17 38 38 H 1.08997 * 109.47530 * 179.97438 * 20 18 17 39 39 H 1.08994 * 109.46934 * 300.00467 * 20 18 17 40 40 H 1.08993 * 113.61636 * 270.87622 * 21 15 14 41 41 H 1.09008 * 113.61006 * 139.97865 * 21 15 14 42 42 H 1.07999 * 123.35559 * 180.24826 * 22 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.2249 1.1292 0.0000 4 6 1.6354 2.5161 0.0006 5 8 0.3755 2.4979 0.6747 6 14 2.7928 3.6825 0.8786 7 16 3.8969 0.7892 0.0062 8 6 3.5936 -0.9427 -0.0006 9 6 4.6231 -1.9862 0.0000 10 8 4.3001 -3.1596 0.0006 11 7 5.9272 -1.6463 0.0000 12 6 6.9561 -2.6892 0.0000 13 1 6.6070 -3.6282 -0.4296 14 6 8.3088 -2.2202 -0.5612 15 6 8.9692 -3.0401 0.5596 16 1 9.1718 -4.0747 0.2824 17 8 10.0969 -2.3937 1.1535 18 6 11.0880 -3.2949 1.6508 19 6 12.1042 -3.5950 0.5471 20 6 11.8039 -2.6580 2.8437 21 6 7.6653 -2.8573 1.3541 22 6 2.2445 -1.1601 -0.0003 23 1 -0.3635 0.0001 1.0276 24 1 -0.3633 0.8899 -0.5140 25 1 -0.3633 -0.8900 -0.5139 26 1 1.4929 2.8507 -1.0269 27 1 0.4267 2.2093 1.5962 28 1 4.1167 3.6864 0.2060 29 1 2.2231 5.0538 0.8854 30 1 6.1847 -0.7111 -0.0009 31 1 8.5210 -2.5976 -1.5615 32 1 8.4707 -1.1461 -0.4699 33 1 10.6103 -4.2223 1.9667 34 1 12.5820 -2.6676 0.2312 35 1 12.8606 -4.2821 0.9266 36 1 11.5943 -4.0487 -0.3028 37 1 11.0799 -2.4442 3.6300 38 1 12.5597 -3.3456 3.2233 39 1 12.2816 -1.7307 2.5278 40 1 7.6513 -1.9576 1.9691 41 1 7.3581 -3.7493 1.9002 42 1 1.8018 -2.1452 0.0000 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10905398_6739946.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:16:27 Heat of formation + Delta-G solvation = -61.872695 kcal Electronic energy + Delta-G solvation = -23303.372615 eV Core-core repulsion = 19763.429618 eV Total energy + Delta-G solvation = -3539.942997 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 312.123 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -41.30458 -40.29645 -39.60134 -37.91571 -37.28862 -34.55306 -32.98960 -31.97953 -30.26071 -28.21771 -27.04829 -26.82091 -25.15982 -23.99957 -22.32174 -21.72379 -21.15270 -20.11945 -19.30981 -18.41674 -17.61442 -17.30050 -16.78609 -16.60614 -16.42818 -16.04612 -15.78430 -15.74030 -15.18266 -14.96458 -14.58585 -14.50538 -14.21753 -13.98836 -13.65978 -13.56288 -13.52127 -13.28161 -13.15441 -13.10474 -12.99645 -12.64549 -12.46892 -12.35892 -12.28003 -12.09336 -11.85887 -11.77237 -11.63461 -11.03764 -10.74398 -10.45357 -10.13857 -9.68460 -9.45449 -5.20529 -0.62772 0.27436 0.69557 1.06275 1.32259 1.44345 1.81060 1.97421 2.17175 2.74354 3.21850 3.36157 3.46766 3.53606 3.71128 3.76859 3.82356 3.94873 4.06975 4.09748 4.21924 4.23775 4.30017 4.41063 4.57235 4.60493 4.64375 4.66193 4.72921 4.78929 4.81342 4.84277 4.87178 4.91024 4.94718 5.03160 5.03894 5.22058 5.24634 5.38180 5.42404 5.45113 6.29974 6.35791 6.37013 7.09832 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.095 4.095 2 C -0.091 4.091 3 C -0.236 4.236 4 C -0.027 4.027 5 O -0.529 6.529 6 Si 0.658 3.342 7 S 0.194 5.806 8 C -0.263 4.263 9 C 0.594 3.406 10 O -0.525 6.525 11 N -0.714 5.714 12 C 0.125 3.875 13 H 0.121 0.879 14 C -0.144 4.144 15 C 0.067 3.933 16 H 0.092 0.908 17 O -0.365 6.365 18 C 0.079 3.921 19 C -0.176 4.176 20 C -0.151 4.151 21 C -0.168 4.168 22 C -0.046 4.046 23 H 0.072 0.928 24 H 0.084 0.916 25 H 0.062 0.938 26 H 0.124 0.876 27 H 0.381 0.619 28 H -0.237 1.237 29 H -0.234 1.234 30 H 0.400 0.600 31 H 0.083 0.917 32 H 0.097 0.903 33 H 0.061 0.939 34 H 0.064 0.936 35 H 0.066 0.934 36 H 0.056 0.944 37 H 0.061 0.939 38 H 0.070 0.930 39 H 0.064 0.936 40 H 0.095 0.905 41 H 0.077 0.923 42 H 0.155 0.845 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.074 1.352 2.118 3.258 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C -0.104 4.104 3 C -0.356 4.356 4 C -0.140 4.140 5 O -0.335 6.335 6 Si 0.558 3.442 7 S 0.462 5.538 8 C -0.383 4.383 9 C 0.381 3.619 10 O -0.403 6.403 11 N -0.365 5.365 12 C 0.020 3.980 13 H 0.139 0.861 14 C -0.182 4.182 15 C 0.009 3.991 16 H 0.110 0.890 17 O -0.284 6.284 18 C 0.022 3.978 19 C -0.234 4.234 20 C -0.208 4.208 21 C -0.207 4.207 22 C -0.079 4.079 23 H 0.091 0.909 24 H 0.103 0.897 25 H 0.081 0.919 26 H 0.141 0.859 27 H 0.229 0.771 28 H -0.161 1.161 29 H -0.157 1.157 30 H 0.235 0.765 31 H 0.101 0.899 32 H 0.115 0.885 33 H 0.079 0.921 34 H 0.083 0.917 35 H 0.085 0.915 36 H 0.075 0.925 37 H 0.081 0.919 38 H 0.089 0.911 39 H 0.083 0.917 40 H 0.114 0.886 41 H 0.095 0.905 42 H 0.173 0.827 Dipole moment (debyes) X Y Z Total from point charges 3.504 2.552 1.493 4.585 hybrid contribution -1.324 -1.005 -0.573 1.758 sum 2.180 1.547 0.920 2.827 Atomic orbital electron populations 1.20642 0.88506 1.03377 1.02883 1.18722 0.98473 0.90474 1.02698 1.24474 0.98380 1.00955 1.11755 1.24464 0.92238 0.95294 1.02014 1.86531 1.27696 1.90040 1.29250 0.94799 0.78216 0.80763 0.90451 1.83051 1.03311 0.98323 1.69110 1.24568 0.98000 0.97028 1.18685 1.16973 0.81646 0.87438 0.75891 1.90853 1.81595 1.18185 1.49644 1.45771 1.05182 1.09941 1.75638 1.22253 0.85683 0.92666 0.97379 0.86125 1.23632 0.93451 1.02181 0.98958 1.23405 0.85200 0.96640 0.93887 0.88975 1.87985 1.30048 1.33325 1.77075 1.22173 0.89019 0.92708 0.93942 1.22334 0.99584 1.02436 0.99033 1.21872 1.00419 1.01737 0.96795 1.24033 0.95360 1.03727 0.97592 1.20746 0.90899 1.00171 0.96076 0.90892 0.89689 0.91920 0.85879 0.77092 1.16109 1.15715 0.76535 0.89880 0.88461 0.92064 0.91693 0.91531 0.92487 0.91943 0.91134 0.91721 0.88645 0.90453 0.82705 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.07 8.67 36.00 0.31 0.38 16 2 C -0.09 -0.03 5.75 -106.46 -0.61 -0.65 16 3 C -0.24 0.08 5.54 -35.86 -0.20 -0.12 16 4 C -0.03 0.03 2.76 36.01 0.10 0.13 16 5 O -0.53 0.75 9.85 -35.23 -0.35 0.40 16 6 Si 0.66 -1.25 31.31 -169.99 -5.32 -6.57 16 7 S 0.19 -0.11 19.78 -107.50 -2.13 -2.23 16 8 C -0.26 -0.43 6.45 -36.79 -0.24 -0.67 16 9 C 0.59 1.80 7.78 -12.89 -0.10 1.70 16 10 O -0.53 -3.40 16.46 5.19 0.09 -3.31 16 11 N -0.71 -0.32 5.36 -54.35 -0.29 -0.61 16 12 C 0.13 0.00 4.22 -67.12 -0.28 -0.28 16 13 H 0.12 0.12 7.50 -51.93 -0.39 -0.27 16 14 C -0.14 0.16 7.66 -25.92 -0.20 -0.04 16 15 C 0.07 -0.03 4.13 -25.92 -0.11 -0.14 16 16 H 0.09 -0.14 7.77 -51.93 -0.40 -0.54 16 17 O -0.37 -0.41 10.00 -35.23 -0.35 -0.76 16 18 C 0.08 -0.02 3.22 -26.73 -0.09 -0.10 16 19 C -0.18 0.14 9.53 37.16 0.35 0.49 16 20 C -0.15 0.10 9.56 37.16 0.36 0.46 16 21 C -0.17 0.03 7.71 -25.92 -0.20 -0.17 16 22 C -0.05 -0.07 9.80 -40.43 -0.40 -0.47 16 23 H 0.07 -0.13 8.14 -51.93 -0.42 -0.56 16 24 H 0.08 0.00 6.42 -51.93 -0.33 -0.34 16 25 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 26 H 0.12 -0.13 7.96 -51.93 -0.41 -0.54 16 27 H 0.38 -1.80 8.66 45.56 0.39 -1.41 16 28 H -0.24 0.06 7.09 56.52 0.40 0.46 16 29 H -0.23 -0.21 7.11 56.52 0.40 0.19 16 30 H 0.40 -0.59 7.83 -40.82 -0.32 -0.90 16 31 H 0.08 -0.14 8.14 -51.93 -0.42 -0.57 16 32 H 0.10 -0.12 8.11 -51.93 -0.42 -0.54 16 33 H 0.06 -0.06 7.72 -51.93 -0.40 -0.46 16 34 H 0.06 -0.01 8.14 -51.93 -0.42 -0.43 16 35 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 36 H 0.06 -0.05 8.14 -51.93 -0.42 -0.47 16 37 H 0.06 -0.03 8.14 -51.93 -0.42 -0.45 16 38 H 0.07 -0.12 8.14 -51.93 -0.42 -0.55 16 39 H 0.06 -0.01 8.14 -51.93 -0.42 -0.44 16 40 H 0.10 0.02 8.14 -51.93 -0.42 -0.40 16 41 H 0.08 0.00 8.14 -51.92 -0.42 -0.42 16 42 H 0.16 0.23 8.06 -52.49 -0.42 -0.19 16 LS Contribution 359.31 15.07 5.41 5.41 Total: 0.00 -6.17 359.31 -10.79 -16.97 By element: Atomic # 1 Polarization: -3.27 SS G_CDS: -6.56 Total: -9.83 kcal Atomic # 6 Polarization: 1.83 SS G_CDS: -1.30 Total: 0.53 kcal Atomic # 7 Polarization: -0.32 SS G_CDS: -0.29 Total: -0.61 kcal Atomic # 8 Polarization: -3.06 SS G_CDS: -0.61 Total: -3.67 kcal Atomic # 14 Polarization: -1.25 SS G_CDS: -5.32 Total: -6.57 kcal Atomic # 16 Polarization: -0.11 SS G_CDS: -2.13 Total: -2.23 kcal Total LS contribution 5.41 Total: 5.41 kcal Total: -6.17 -10.79 -16.97 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10905398_6739946.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -44.905 kcal (2) G-P(sol) polarization free energy of solvation -6.173 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -51.078 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.794 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.967 kcal (6) G-S(sol) free energy of system = (1) + (5) -61.873 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds