Wall clock time and date at job start Sat Mar 6 2021 13:16:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 O 1.42898 * 109.47124 * 2 1 4 4 C 1.42899 * 113.99561 * 179.97438 * 3 2 1 5 5 H 1.08995 * 112.85479 * 341.19836 * 4 3 2 6 6 C 1.53964 * 113.74074 * 112.40465 * 4 3 2 7 7 C 1.53774 * 87.02099 * 139.94003 * 6 4 3 8 8 H 1.09003 * 113.61406 * 89.22620 * 7 6 4 9 9 N 1.46497 * 113.61632 * 220.04727 * 7 6 4 10 10 C 1.34783 * 119.99628 * 254.14048 * 9 7 6 11 11 O 1.21684 * 120.00387 * 5.19576 * 10 9 7 12 12 C 1.46681 * 119.99280 * 185.20265 * 10 9 7 13 13 C 1.37866 * 126.23665 * 5.63459 * 12 10 9 14 14 C 1.39843 * 107.08485 * 180.02562 * 13 12 10 15 15 C 1.50699 * 126.06532 * 180.26511 * 14 13 12 16 16 O 1.42901 * 109.47383 * 299.71786 * 15 14 13 17 17 Si 1.86300 * 109.47016 * 179.71765 * 15 14 13 18 18 C 1.35445 * 107.86486 * 0.02562 * 14 13 12 19 19 N 1.35539 * 108.87538 * 359.97438 * 18 14 13 20 20 C 1.46498 * 125.68121 * 180.02562 * 19 18 14 21 21 C 1.53778 * 87.17321 * 334.63889 * 7 6 4 22 22 H 1.08995 * 109.47410 * 180.02562 * 1 2 3 23 23 H 1.09002 * 109.46906 * 300.00134 * 1 2 3 24 24 H 1.08999 * 109.46857 * 60.00328 * 1 2 3 25 25 H 1.09002 * 109.46906 * 239.99866 * 2 1 3 26 26 H 1.09005 * 109.46716 * 120.00097 * 2 1 3 27 27 H 1.09000 * 113.61277 * 25.41468 * 6 4 3 28 28 H 1.09003 * 113.66227 * 254.46863 * 6 4 3 29 29 H 0.96994 * 120.00030 * 74.13634 * 9 7 6 30 30 H 1.07997 * 126.45987 * 0.02887 * 13 12 10 31 31 H 1.08994 * 109.47440 * 59.71861 * 15 14 13 32 32 H 0.96695 * 114.00141 * 180.02562 * 16 15 14 33 33 H 1.48499 * 109.99846 * 298.67972 * 17 15 14 34 34 H 1.48506 * 109.99974 * 59.99771 * 17 15 14 35 35 H 1.07998 * 125.56530 * 180.02562 * 18 14 13 36 36 H 1.08992 * 109.47204 * 85.90843 * 20 19 18 37 37 H 1.09003 * 109.46707 * 205.90952 * 20 19 18 38 38 H 1.09004 * 109.46400 * 325.90452 * 20 19 18 39 39 H 1.09001 * 113.61445 * 139.93904 * 21 7 6 40 40 H 1.08997 * 113.61327 * 270.75515 * 21 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0064 1.3473 0.0000 4 6 3.4309 1.4600 0.0006 5 1 3.9278 0.5456 0.3246 6 6 4.0070 2.0442 -1.3022 7 6 4.9914 2.8299 -0.4201 8 1 5.9155 2.2912 -0.2103 9 7 5.2242 4.2017 -0.8787 10 6 6.3863 4.5226 -1.4814 11 8 7.2028 3.6552 -1.7298 12 6 6.6667 5.9176 -1.8376 13 6 5.8893 7.0115 -1.5218 14 6 6.5266 8.1362 -2.0551 15 6 6.0445 9.5604 -1.9539 16 8 4.7600 9.6735 -2.5699 17 14 7.2497 10.6869 -2.8194 18 6 7.6567 7.7189 -2.6742 19 7 7.7537 6.3728 -2.5492 20 6 8.8353 5.5409 -3.0822 21 6 3.9484 2.7252 0.7050 22 1 -0.3634 -1.0276 0.0005 23 1 -0.3633 0.5139 0.8900 24 1 -0.3633 0.5138 -0.8900 25 1 1.8933 -0.5139 -0.8900 26 1 1.8933 -0.5139 0.8900 27 1 3.3051 2.6777 -1.8445 28 1 4.4881 1.3020 -1.9393 29 1 4.5421 4.8788 -0.7487 30 1 4.9628 7.0016 -0.9669 31 1 5.9704 9.8452 -0.9044 32 1 4.3877 10.5655 -2.5422 33 1 8.5815 10.6025 -2.1681 34 1 7.3597 10.3090 -4.2514 35 1 8.3653 8.3551 -3.1836 36 1 9.6581 5.5131 -2.3680 37 1 8.4661 4.5292 -3.2508 38 1 9.1862 5.9614 -4.0247 39 1 4.3824 2.5321 1.6861 40 1 3.2314 3.5461 0.7135 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10905468_10803934.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:16:51 Heat of formation + Delta-G solvation = -32.996770 kcal Electronic energy + Delta-G solvation = -21871.158095 eV Core-core repulsion = 18461.652855 eV Total energy + Delta-G solvation = -3409.505241 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 281.146 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -42.54218 -40.97666 -39.50325 -37.67735 -37.41286 -34.68834 -33.73283 -31.86462 -30.80228 -28.39871 -26.82080 -25.98931 -25.31357 -23.80068 -23.17334 -21.28400 -21.01922 -20.19562 -18.59249 -18.28539 -18.24419 -17.13589 -16.76169 -16.70760 -16.48519 -16.21247 -15.51102 -15.31430 -15.22616 -14.94128 -14.54817 -14.33342 -14.07355 -13.96988 -13.62053 -13.52919 -13.51662 -13.27294 -13.13623 -12.78553 -12.49859 -12.40624 -12.14628 -11.97684 -11.90351 -11.79800 -10.97082 -10.43174 -10.25678 -10.09397 -9.64831 -9.24589 -4.98967 0.44134 1.31728 1.47843 1.57236 1.70222 2.01436 2.25470 2.35927 2.80328 3.38416 3.50203 3.54118 3.71780 3.78285 3.82029 3.83787 3.91451 4.09952 4.12845 4.21007 4.24995 4.35199 4.38531 4.42690 4.59272 4.61607 4.64853 4.69400 4.75634 4.78379 4.89979 4.93914 4.97951 5.04069 5.18350 5.21808 5.45229 5.66797 5.90536 6.09534 6.27001 6.47067 6.73895 7.17021 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C 0.055 3.945 3 O -0.372 6.372 4 C 0.066 3.934 5 H 0.092 0.908 6 C -0.168 4.168 7 C 0.128 3.872 8 H 0.119 0.881 9 N -0.705 5.705 10 C 0.594 3.406 11 O -0.547 6.547 12 C -0.053 4.053 13 C -0.108 4.108 14 C -0.162 4.162 15 C -0.033 4.033 16 O -0.547 6.547 17 Si 0.683 3.317 18 C 0.019 3.981 19 N -0.404 5.404 20 C 0.063 3.937 21 C -0.143 4.143 22 H 0.071 0.929 23 H 0.063 0.937 24 H 0.063 0.937 25 H 0.049 0.951 26 H 0.050 0.950 27 H 0.095 0.905 28 H 0.076 0.924 29 H 0.406 0.594 30 H 0.148 0.852 31 H 0.071 0.929 32 H 0.380 0.620 33 H -0.257 1.257 34 H -0.253 1.253 35 H 0.164 0.836 36 H 0.080 0.920 37 H 0.108 0.892 38 H 0.083 0.917 39 H 0.083 0.917 40 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.291 2.493 1.592 3.228 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.210 4.210 2 C -0.021 4.021 3 O -0.291 6.291 4 C 0.008 3.992 5 H 0.110 0.890 6 C -0.207 4.207 7 C 0.023 3.977 8 H 0.136 0.864 9 N -0.356 5.356 10 C 0.383 3.617 11 O -0.426 6.426 12 C -0.167 4.167 13 C -0.134 4.134 14 C -0.168 4.168 15 C -0.145 4.145 16 O -0.353 6.353 17 Si 0.584 3.416 18 C -0.117 4.117 19 N -0.075 5.075 20 C -0.078 4.078 21 C -0.181 4.181 22 H 0.090 0.910 23 H 0.082 0.918 24 H 0.082 0.918 25 H 0.067 0.933 26 H 0.068 0.932 27 H 0.114 0.886 28 H 0.095 0.905 29 H 0.242 0.758 30 H 0.166 0.834 31 H 0.089 0.911 32 H 0.227 0.773 33 H -0.182 1.182 34 H -0.178 1.178 35 H 0.181 0.819 36 H 0.098 0.902 37 H 0.126 0.874 38 H 0.102 0.898 39 H 0.101 0.899 40 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges 0.332 1.168 0.737 1.420 hybrid contribution -0.160 -0.330 0.249 0.443 sum 0.171 0.838 0.986 1.306 Atomic orbital electron populations 1.21759 0.93556 1.02481 1.03233 1.22553 0.95806 0.83625 1.00157 1.87954 1.19987 1.26653 1.94537 1.23409 0.81711 0.97720 0.96391 0.89011 1.24057 0.98525 1.00316 0.97816 1.22218 0.98132 0.82350 0.95002 0.86361 1.45544 1.17747 1.11881 1.60454 1.16952 0.81752 0.85948 0.77087 1.90788 1.47189 1.50125 1.54487 1.20033 0.93409 0.93992 1.09230 1.21176 0.99572 0.90135 1.02530 1.18702 0.97185 0.94300 1.06639 1.23936 0.92347 0.97109 1.01108 1.86502 1.32974 1.34963 1.80873 0.95305 0.78766 0.87566 0.79962 1.21647 1.01124 0.83503 1.05462 1.43760 1.18093 1.06215 1.39478 1.22376 0.88781 0.97043 0.99592 1.23622 0.97436 0.98674 0.98356 0.90963 0.91770 0.91781 0.93253 0.93213 0.88629 0.90550 0.75813 0.83418 0.91148 0.77340 1.18207 1.17778 0.81856 0.90164 0.87395 0.89806 0.89853 0.88316 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.07 10.28 37.16 0.38 0.46 16 2 C 0.06 0.00 6.50 37.16 0.24 0.24 16 3 O -0.37 -0.65 10.36 -35.23 -0.36 -1.02 16 4 C 0.07 0.00 4.31 -25.82 -0.11 -0.12 16 5 H 0.09 -0.12 7.87 -51.93 -0.41 -0.53 16 6 C -0.17 -0.07 7.73 -25.83 -0.20 -0.27 16 7 C 0.13 0.04 4.18 -67.12 -0.28 -0.24 16 8 H 0.12 0.14 7.57 -51.93 -0.39 -0.26 16 9 N -0.71 -0.61 5.33 -54.33 -0.29 -0.90 16 10 C 0.59 2.19 7.77 -12.85 -0.10 2.09 16 11 O -0.55 -3.40 14.32 5.20 0.07 -3.32 16 12 C -0.05 -0.19 6.88 -81.98 -0.56 -0.75 16 13 C -0.11 -0.28 10.28 -39.12 -0.40 -0.68 16 14 C -0.16 -0.46 5.47 -105.02 -0.57 -1.03 16 15 C -0.03 -0.01 3.01 36.01 0.11 0.10 16 16 O -0.55 -0.26 12.86 -35.23 -0.45 -0.72 16 17 Si 0.68 -0.74 30.59 -169.99 -5.20 -5.94 16 18 C 0.02 0.05 9.94 -16.91 -0.17 -0.11 16 19 N -0.40 -1.30 3.16 -120.24 -0.38 -1.68 16 20 C 0.06 0.07 10.64 59.85 0.64 0.70 16 21 C -0.14 0.13 7.66 -25.92 -0.20 -0.07 16 22 H 0.07 -0.12 8.14 -51.93 -0.42 -0.55 16 23 H 0.06 -0.01 8.14 -51.93 -0.42 -0.43 16 24 H 0.06 0.00 8.14 -51.93 -0.42 -0.42 16 25 H 0.05 -0.02 8.14 -51.93 -0.42 -0.45 16 26 H 0.05 -0.04 8.14 -51.93 -0.42 -0.47 16 27 H 0.10 0.11 8.14 -51.93 -0.42 -0.32 16 28 H 0.08 0.05 8.14 -51.93 -0.42 -0.37 16 29 H 0.41 -0.44 7.66 -40.82 -0.31 -0.75 16 30 H 0.15 0.05 7.49 -52.49 -0.39 -0.34 16 31 H 0.07 -0.09 7.96 -51.93 -0.41 -0.50 16 32 H 0.38 -1.75 8.74 45.56 0.40 -1.35 16 33 H -0.26 -0.32 7.11 56.52 0.40 0.08 16 34 H -0.25 -0.54 7.11 56.52 0.40 -0.14 16 35 H 0.16 0.18 6.19 -52.49 -0.32 -0.14 16 36 H 0.08 0.02 8.14 -51.93 -0.42 -0.41 16 37 H 0.11 0.26 6.22 -51.93 -0.32 -0.07 16 38 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 39 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 40 H 0.10 -0.10 8.11 -51.93 -0.42 -0.52 16 LS Contribution 334.71 15.07 5.04 5.04 Total: 0.00 -8.39 334.71 -8.82 -17.21 By element: Atomic # 1 Polarization: -2.97 SS G_CDS: -6.02 Total: -8.99 kcal Atomic # 6 Polarization: 1.54 SS G_CDS: -1.23 Total: 0.31 kcal Atomic # 7 Polarization: -1.92 SS G_CDS: -0.67 Total: -2.59 kcal Atomic # 8 Polarization: -4.31 SS G_CDS: -0.74 Total: -5.05 kcal Atomic # 14 Polarization: -0.74 SS G_CDS: -5.20 Total: -5.94 kcal Total LS contribution 5.04 Total: 5.04 kcal Total: -8.39 -8.82 -17.21 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10905468_10803934.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -15.792 kcal (2) G-P(sol) polarization free energy of solvation -8.390 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -24.181 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.816 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.205 kcal (6) G-S(sol) free energy of system = (1) + (5) -32.997 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds