Wall clock time and date at job start Sat Mar 6 2021 13:16:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 O 1.42901 * 109.47516 * 2 1 4 4 C 1.42897 * 113.99998 * 180.02562 * 3 2 1 5 5 H 1.08994 * 112.85202 * 20.32633 * 4 3 2 6 6 C 1.53785 * 113.61490 * 151.52890 * 4 3 2 7 7 C 1.53779 * 87.08502 * 139.97680 * 6 4 3 8 8 H 1.09001 * 113.61461 * 89.11076 * 7 6 4 9 9 N 1.46500 * 113.61704 * 219.93600 * 7 6 4 10 10 C 1.34775 * 120.00208 * 205.00039 * 9 7 6 11 11 O 1.21700 * 119.99443 * 354.74016 * 10 9 7 12 12 C 1.46670 * 120.00202 * 174.73726 * 10 9 7 13 13 C 1.37880 * 126.23083 * 4.90483 * 12 10 9 14 14 C 1.39836 * 107.08319 * 179.97438 * 13 12 10 15 15 C 1.35454 * 107.86487 * 359.97438 * 14 13 12 16 16 C 1.50696 * 125.56348 * 180.02562 * 15 14 13 17 17 O 1.42905 * 109.47500 * 209.97623 * 16 15 14 18 18 Si 1.86303 * 109.47404 * 329.97542 * 16 15 14 19 19 N 1.35536 * 108.87529 * 359.76627 * 15 14 13 20 20 C 1.46497 * 125.68287 * 180.26273 * 19 15 14 21 21 C 1.53784 * 113.61116 * 249.12945 * 4 3 2 22 22 H 1.08999 * 109.47190 * 180.02562 * 1 2 3 23 23 H 1.09001 * 109.47037 * 300.00667 * 1 2 3 24 24 H 1.08995 * 109.46925 * 60.00074 * 1 2 3 25 25 H 1.09001 * 109.47037 * 239.99333 * 2 1 3 26 26 H 1.09006 * 109.47283 * 119.99605 * 2 1 3 27 27 H 1.09004 * 113.61007 * 254.52722 * 6 4 3 28 28 H 1.08997 * 113.61285 * 25.42592 * 6 4 3 29 29 H 0.96998 * 119.99518 * 24.99477 * 9 7 6 30 30 H 1.08000 * 126.45483 * 359.92376 * 13 12 10 31 31 H 1.07992 * 126.07016 * 180.02562 * 14 13 12 32 32 H 1.09000 * 109.47262 * 89.97754 * 16 15 14 33 33 H 0.96696 * 114.00588 * 180.02562 * 17 16 15 34 34 H 1.48501 * 110.00288 * 178.68032 * 18 16 15 35 35 H 1.48501 * 109.99743 * 300.00116 * 18 16 15 36 36 H 1.08996 * 109.47314 * 274.24555 * 20 19 15 37 37 H 1.08997 * 109.46569 * 34.24179 * 20 19 15 38 38 H 1.08992 * 109.46963 * 154.24489 * 20 19 15 39 39 H 1.09001 * 113.61569 * 334.57150 * 21 4 3 40 40 H 1.09002 * 113.61004 * 105.47190 * 21 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 8 2.0064 1.3472 0.0000 4 6 3.4309 1.4600 -0.0006 5 1 3.9270 0.5545 -0.3498 6 6 3.9470 2.7435 -0.6723 7 6 4.9910 2.8196 0.4542 8 1 5.9146 2.2858 0.2303 9 7 5.2247 4.1793 0.9469 10 6 6.3993 4.4926 1.5288 11 8 7.2284 3.6251 1.7316 12 6 6.6784 5.8791 1.9175 13 6 5.8020 6.9404 1.8362 14 6 6.4786 8.0690 2.3094 15 6 7.7284 7.6858 2.6642 16 6 8.7955 8.5891 3.2267 17 8 10.0831 8.1002 2.8454 18 14 8.5640 10.3135 2.5608 19 7 7.8608 6.3563 2.4362 20 6 9.0631 5.5605 2.6953 21 6 4.0059 2.0088 1.3159 22 1 -0.3633 -1.0277 0.0005 23 1 -0.3633 0.5139 0.8899 24 1 -0.3633 0.5138 -0.8900 25 1 1.8933 -0.5139 -0.8899 26 1 1.8933 -0.5138 0.8901 27 1 4.3802 2.5762 -1.6585 28 1 3.2286 3.5630 -0.6579 29 1 4.5341 4.8541 0.8543 30 1 4.7850 6.9065 1.4744 31 1 6.0759 9.0685 2.3804 32 1 8.7209 8.6064 4.3140 33 1 10.8196 8.6338 3.1739 34 1 9.5909 11.2211 3.1327 35 1 8.6636 10.3034 1.0791 36 1 9.7312 5.6213 1.8362 37 1 9.5712 5.9470 3.5787 38 1 8.7815 4.5211 2.8636 39 1 3.3036 2.6272 1.8749 40 1 4.4865 1.2493 1.9326 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10905468_10803936.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:16:54 Heat of formation + Delta-G solvation = -35.464758 kcal Electronic energy + Delta-G solvation = -21935.485706 eV Core-core repulsion = 18525.873445 eV Total energy + Delta-G solvation = -3409.612261 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 281.146 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -42.47135 -40.95329 -39.48580 -37.89922 -37.42218 -34.59529 -33.47736 -31.89199 -31.26863 -27.40696 -27.12156 -26.79910 -24.89996 -23.72651 -22.88738 -21.32685 -21.15542 -20.06244 -18.68797 -18.49789 -18.20503 -17.04334 -16.74089 -16.67856 -16.49712 -16.21345 -15.86881 -15.26660 -15.11916 -14.53895 -14.39494 -14.33876 -13.96287 -13.90162 -13.62753 -13.51394 -13.49736 -13.20319 -12.91865 -12.77343 -12.65994 -12.48407 -12.12023 -12.05585 -11.96671 -11.77924 -10.96542 -10.72787 -10.42193 -10.04947 -9.64972 -8.98473 -4.98452 0.48735 1.12343 1.55341 1.70466 1.77525 1.98139 2.38257 2.45391 2.82640 3.01112 3.41707 3.51965 3.67751 3.78165 3.81027 3.88023 4.06358 4.13419 4.22648 4.25965 4.36607 4.43352 4.44217 4.52884 4.59905 4.65057 4.70653 4.76770 4.87230 4.91683 4.95595 4.98772 5.05502 5.08358 5.20188 5.22801 5.50239 5.79978 6.08172 6.21990 6.27102 6.28017 6.53444 7.23871 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C 0.055 3.945 3 O -0.373 6.373 4 C 0.066 3.934 5 H 0.092 0.908 6 C -0.142 4.142 7 C 0.128 3.872 8 H 0.118 0.882 9 N -0.706 5.706 10 C 0.593 3.407 11 O -0.547 6.547 12 C -0.056 4.056 13 C -0.133 4.133 14 C -0.202 4.202 15 C 0.059 3.941 16 C -0.058 4.058 17 O -0.541 6.541 18 Si 0.714 3.286 19 N -0.389 5.389 20 C 0.072 3.928 21 C -0.168 4.168 22 H 0.071 0.929 23 H 0.063 0.937 24 H 0.063 0.937 25 H 0.049 0.951 26 H 0.049 0.951 27 H 0.082 0.918 28 H 0.098 0.902 29 H 0.405 0.595 30 H 0.148 0.852 31 H 0.154 0.846 32 H 0.082 0.918 33 H 0.384 0.616 34 H -0.259 1.259 35 H -0.253 1.253 36 H 0.075 0.925 37 H 0.085 0.915 38 H 0.101 0.899 39 H 0.095 0.905 40 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.459 1.921 0.874 3.240 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.210 4.210 2 C -0.021 4.021 3 O -0.292 6.292 4 C 0.007 3.993 5 H 0.109 0.891 6 C -0.180 4.180 7 C 0.023 3.977 8 H 0.136 0.864 9 N -0.357 5.357 10 C 0.382 3.618 11 O -0.426 6.426 12 C -0.170 4.170 13 C -0.159 4.159 14 C -0.225 4.225 15 C -0.059 4.059 16 C -0.166 4.166 17 O -0.349 6.349 18 Si 0.613 3.387 19 N -0.061 5.061 20 C -0.068 4.068 21 C -0.208 4.208 22 H 0.090 0.910 23 H 0.082 0.918 24 H 0.082 0.918 25 H 0.068 0.932 26 H 0.067 0.933 27 H 0.101 0.899 28 H 0.117 0.883 29 H 0.241 0.759 30 H 0.166 0.834 31 H 0.172 0.828 32 H 0.099 0.901 33 H 0.233 0.767 34 H -0.184 1.184 35 H -0.177 1.177 36 H 0.094 0.906 37 H 0.104 0.896 38 H 0.119 0.881 39 H 0.114 0.886 40 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges -1.653 1.394 0.313 2.185 hybrid contribution 1.055 -0.305 0.266 1.130 sum -0.598 1.089 0.579 1.371 Atomic orbital electron populations 1.21757 0.93571 1.02475 1.03219 1.22545 0.95782 0.83645 1.00161 1.87949 1.20026 1.26638 1.94567 1.23385 0.81676 0.97756 0.96455 0.89058 1.23617 0.97449 0.98487 0.98488 1.22234 0.98104 0.82705 0.94652 0.86375 1.45513 1.16588 1.12766 1.60827 1.17008 0.81861 0.86059 0.76885 1.90782 1.46848 1.49855 1.55156 1.19995 0.88684 0.94445 1.13895 1.21267 0.99122 0.91325 1.04225 1.20466 0.93193 0.99884 1.08982 1.19989 0.96154 0.83301 1.06492 1.24590 0.82582 1.07268 1.02200 1.86564 1.14772 1.54619 1.78966 0.94468 0.89736 0.73131 0.81372 1.43727 1.10874 1.06959 1.44491 1.22292 0.84735 0.96878 1.02926 1.24064 0.98560 1.00319 0.97811 0.90975 0.91788 0.91776 0.93231 0.93255 0.89896 0.88327 0.75888 0.83420 0.82832 0.90068 0.76698 1.18416 1.17671 0.90640 0.89616 0.88059 0.88624 0.90578 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.10 10.28 37.16 0.38 0.48 16 2 C 0.06 0.00 6.50 37.16 0.24 0.24 16 3 O -0.37 -0.58 10.35 -35.23 -0.36 -0.95 16 4 C 0.07 -0.01 4.30 -25.92 -0.11 -0.12 16 5 H 0.09 -0.12 7.88 -51.93 -0.41 -0.53 16 6 C -0.14 0.14 7.66 -25.92 -0.20 -0.06 16 7 C 0.13 0.03 4.20 -67.03 -0.28 -0.25 16 8 H 0.12 0.16 7.53 -51.93 -0.39 -0.23 16 9 N -0.71 -0.42 5.35 -54.23 -0.29 -0.71 16 10 C 0.59 2.19 7.77 -12.86 -0.10 2.09 16 11 O -0.55 -3.63 14.21 5.19 0.07 -3.56 16 12 C -0.06 -0.18 6.89 -81.98 -0.56 -0.75 16 13 C -0.13 -0.13 10.36 -39.12 -0.41 -0.54 16 14 C -0.20 -0.13 9.37 -39.98 -0.37 -0.51 16 15 C 0.06 0.12 6.17 -81.95 -0.51 -0.39 16 16 C -0.06 0.02 2.89 36.00 0.10 0.13 16 17 O -0.54 -0.12 10.48 -35.23 -0.37 -0.49 16 18 Si 0.71 -1.06 31.10 -169.99 -5.29 -6.34 16 19 N -0.39 -1.41 3.16 -115.63 -0.37 -1.78 16 20 C 0.07 0.21 9.38 59.85 0.56 0.77 16 21 C -0.17 -0.03 7.73 -25.82 -0.20 -0.23 16 22 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 23 H 0.06 -0.01 8.14 -51.93 -0.42 -0.43 16 24 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 25 H 0.05 -0.04 8.14 -51.93 -0.42 -0.47 16 26 H 0.05 -0.03 8.14 -51.93 -0.42 -0.45 16 27 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 28 H 0.10 -0.12 8.12 -51.93 -0.42 -0.54 16 29 H 0.41 -0.71 7.63 -40.82 -0.31 -1.03 16 30 H 0.15 -0.31 7.45 -52.49 -0.39 -0.70 16 31 H 0.15 -0.39 6.85 -52.49 -0.36 -0.75 16 32 H 0.08 -0.17 7.96 -51.93 -0.41 -0.58 16 33 H 0.38 -1.47 8.74 45.56 0.40 -1.07 16 34 H -0.26 -0.05 7.11 56.52 0.40 0.35 16 35 H -0.25 -0.61 7.11 56.52 0.40 -0.21 16 36 H 0.08 0.24 8.14 -51.93 -0.42 -0.19 16 37 H 0.09 0.14 7.09 -51.93 -0.37 -0.23 16 38 H 0.10 0.40 6.01 -51.93 -0.31 0.09 16 39 H 0.10 0.06 8.14 -51.93 -0.42 -0.37 16 40 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 LS Contribution 330.91 15.07 4.99 4.99 Total: 0.00 -8.19 330.91 -9.05 -17.24 By element: Atomic # 1 Polarization: -3.28 SS G_CDS: -5.98 Total: -9.26 kcal Atomic # 6 Polarization: 2.31 SS G_CDS: -1.45 Total: 0.86 kcal Atomic # 7 Polarization: -1.83 SS G_CDS: -0.66 Total: -2.49 kcal Atomic # 8 Polarization: -4.34 SS G_CDS: -0.66 Total: -5.00 kcal Atomic # 14 Polarization: -1.06 SS G_CDS: -5.29 Total: -6.34 kcal Total LS contribution 4.99 Total: 4.99 kcal Total: -8.19 -9.05 -17.24 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10905468_10803936.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -18.222 kcal (2) G-P(sol) polarization free energy of solvation -8.193 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -26.414 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.051 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.243 kcal (6) G-S(sol) free energy of system = (1) + (5) -35.465 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds