Wall clock time and date at job start Sat Mar 6 2021 13:16:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 O 1.42898 * 109.47319 * 2 1 4 4 C 1.42902 * 114.00186 * 180.02562 * 3 2 1 5 5 H 1.08994 * 112.84727 * 18.80296 * 4 3 2 6 6 C 1.53776 * 113.61384 * 149.99846 * 4 3 2 7 7 C 1.53775 * 87.08215 * 139.98219 * 6 4 3 8 8 H 1.08997 * 113.61749 * 89.11381 * 7 6 4 9 9 N 1.46497 * 113.61447 * 219.93461 * 7 6 4 10 10 C 1.34780 * 120.00065 * 204.99656 * 9 7 6 11 11 O 1.21724 * 120.00084 * 0.02562 * 10 9 7 12 12 C 1.46570 * 120.00330 * 180.02562 * 10 9 7 13 13 C 1.40848 * 126.58059 * 180.02562 * 12 10 9 14 14 C 1.40088 * 132.86828 * 359.97438 * 13 12 10 15 15 C 1.36452 * 119.25664 * 180.02562 * 14 13 12 16 16 C 1.50699 * 120.29766 * 179.97438 * 15 14 13 17 17 O 1.42892 * 109.47265 * 120.00093 * 16 15 14 18 18 Si 1.86307 * 109.47099 * 240.00365 * 16 15 14 19 19 C 1.40159 * 119.40833 * 359.95996 * 15 14 13 20 20 C 1.35186 * 120.31946 * 0.04033 * 19 15 14 21 21 N 1.36246 * 120.70575 * 359.97438 * 20 19 15 22 22 N 1.40015 * 132.01014 * 180.02562 * 21 20 19 23 23 C 1.30748 * 109.59819 * 179.71621 * 22 21 20 24 24 C 1.53780 * 87.08140 * 334.56626 * 7 6 4 25 25 H 1.09002 * 109.47153 * 300.00307 * 1 2 3 26 26 H 1.08998 * 109.47533 * 59.99936 * 1 2 3 27 27 H 1.08996 * 109.47853 * 180.02562 * 1 2 3 28 28 H 1.09002 * 109.47153 * 239.99693 * 2 1 3 29 29 H 1.09001 * 109.46832 * 119.99884 * 2 1 3 30 30 H 1.09000 * 113.61355 * 254.52980 * 6 4 3 31 31 H 1.09003 * 113.61973 * 25.43073 * 6 4 3 32 32 H 0.97002 * 120.00324 * 24.99926 * 9 7 6 33 33 H 1.07998 * 120.37533 * 359.97438 * 14 13 12 34 34 H 1.08994 * 109.47035 * 359.97438 * 16 15 14 35 35 H 0.96704 * 114.00349 * 60.00048 * 17 16 15 36 36 H 1.48499 * 109.99929 * 180.02562 * 18 16 15 37 37 H 1.48495 * 109.99743 * 301.31585 * 18 16 15 38 38 H 1.07995 * 119.83972 * 180.02562 * 19 15 14 39 39 H 1.07994 * 119.64849 * 180.02562 * 20 19 15 40 40 H 1.08003 * 125.62013 * 180.27075 * 23 22 21 41 41 H 1.08999 * 113.61342 * 270.88677 * 24 7 6 42 42 H 1.08997 * 113.61666 * 139.98128 * 24 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3472 0.0000 4 6 3.4309 1.4601 -0.0006 5 1 3.9277 0.5457 -0.3247 6 6 3.9483 2.7252 -0.7051 7 6 4.9900 2.8313 0.4211 8 1 5.9141 2.2919 0.2134 9 7 5.2227 4.2036 0.8779 10 6 6.3961 4.5323 1.4537 11 8 7.2627 3.6891 1.5938 12 6 6.6288 5.9052 1.9113 13 6 7.7956 6.3984 2.5270 14 6 9.0132 5.8012 2.8780 15 6 9.9778 6.5566 3.4787 16 6 11.2961 5.9380 3.8667 17 8 12.3567 6.6105 3.1851 18 14 11.5399 6.0988 5.7067 19 6 9.7317 7.9130 3.7315 20 6 8.5491 8.4683 3.3842 21 7 7.5797 7.7222 2.7842 22 7 6.2942 8.0446 2.3323 23 6 5.7330 6.9838 1.8134 24 6 4.0030 2.0461 1.3010 25 1 -0.3633 0.5139 0.8900 26 1 -0.3634 0.5138 -0.8899 27 1 -0.3635 -1.0276 0.0005 28 1 1.8933 -0.5139 -0.8900 29 1 1.8933 -0.5138 0.8900 30 1 4.3835 2.5319 -1.6856 31 1 3.2299 3.5449 -0.7141 32 1 4.5323 4.8757 0.7660 33 1 9.1863 4.7544 2.6761 34 1 11.2977 4.8835 3.5912 35 1 12.4154 7.5551 3.3836 36 1 12.8369 5.4931 6.1020 37 1 11.5077 7.5304 6.1001 38 1 10.4903 8.5175 4.2062 39 1 8.3711 9.5146 3.5836 40 1 4.7431 6.9426 1.3833 41 1 3.2994 2.6802 1.8406 42 1 4.4822 1.3046 1.9401 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10905468_11618758.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:16:56 Heat of formation + Delta-G solvation = 21.124146 kcal Electronic energy + Delta-G solvation = -25785.612752 eV Core-core repulsion = 21928.350038 eV Total energy + Delta-G solvation = -3857.262714 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 318.141 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -43.30087 -41.00875 -39.70024 -39.24485 -37.41332 -37.32319 -34.33151 -34.01075 -32.11550 -31.78417 -30.29125 -27.41199 -26.75469 -25.65649 -24.74544 -23.77365 -23.36170 -22.96535 -21.30122 -20.82727 -19.03766 -18.65369 -18.33027 -17.85648 -17.45907 -16.95665 -16.68262 -16.58402 -16.48285 -16.16854 -15.89871 -15.53373 -15.39672 -14.98985 -14.78336 -14.41096 -14.24107 -13.93929 -13.85050 -13.54375 -13.47600 -13.47263 -13.26616 -12.75838 -12.48002 -12.46610 -12.13355 -12.05420 -11.94591 -11.89386 -11.74954 -11.56084 -10.91519 -10.73034 -10.38901 -10.37250 -9.93931 -8.76899 -5.06309 -0.56387 -0.16574 0.98891 1.06835 1.11428 1.47307 1.79959 2.05434 2.21536 2.59412 2.83422 3.06301 3.14168 3.27064 3.41280 3.48707 3.56975 3.62406 3.83964 3.84798 3.86531 3.98618 4.11515 4.14987 4.23333 4.25826 4.34014 4.43924 4.44817 4.49851 4.68257 4.72925 4.73999 4.79606 4.94832 5.00040 5.00574 5.06730 5.11447 5.16269 5.23139 5.27176 5.61291 5.63355 6.20911 6.30211 6.31209 6.64313 7.41249 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C 0.055 3.945 3 O -0.374 6.374 4 C 0.065 3.935 5 H 0.092 0.908 6 C -0.144 4.144 7 C 0.129 3.871 8 H 0.120 0.880 9 N -0.716 5.716 10 C 0.603 3.397 11 O -0.549 6.549 12 C -0.315 4.315 13 C 0.170 3.830 14 C -0.090 4.090 15 C -0.066 4.066 16 C -0.075 4.075 17 O -0.521 6.521 18 Si 0.696 3.304 19 C -0.162 4.162 20 C 0.123 3.877 21 N -0.267 5.267 22 N -0.313 5.313 23 C 0.121 3.879 24 C -0.168 4.168 25 H 0.063 0.937 26 H 0.063 0.937 27 H 0.071 0.929 28 H 0.049 0.951 29 H 0.049 0.951 30 H 0.081 0.919 31 H 0.096 0.904 32 H 0.400 0.600 33 H 0.165 0.835 34 H 0.126 0.874 35 H 0.375 0.625 36 H -0.247 1.247 37 H -0.253 1.253 38 H 0.156 0.844 39 H 0.177 0.823 40 H 0.199 0.801 41 H 0.094 0.906 42 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.630 0.227 1.555 2.264 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.210 4.210 2 C -0.021 4.021 3 O -0.292 6.292 4 C 0.007 3.993 5 H 0.109 0.891 6 C -0.183 4.183 7 C 0.024 3.976 8 H 0.137 0.863 9 N -0.367 5.367 10 C 0.392 3.608 11 O -0.428 6.428 12 C -0.330 4.330 13 C 0.049 3.951 14 C -0.109 4.109 15 C -0.072 4.072 16 C -0.184 4.184 17 O -0.327 6.327 18 Si 0.594 3.406 19 C -0.184 4.184 20 C -0.003 4.003 21 N -0.031 5.031 22 N -0.133 5.133 23 C -0.060 4.060 24 C -0.207 4.207 25 H 0.082 0.918 26 H 0.082 0.918 27 H 0.090 0.910 28 H 0.068 0.932 29 H 0.068 0.932 30 H 0.100 0.900 31 H 0.115 0.885 32 H 0.234 0.766 33 H 0.183 0.817 34 H 0.144 0.856 35 H 0.223 0.777 36 H -0.171 1.171 37 H -0.177 1.177 38 H 0.174 0.826 39 H 0.194 0.806 40 H 0.216 0.784 41 H 0.112 0.888 42 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges -0.817 0.800 2.273 2.545 hybrid contribution 0.136 0.294 -0.938 0.992 sum -0.681 1.095 1.335 1.856 Atomic orbital electron populations 1.21758 0.93624 1.02457 1.03188 1.22541 0.95741 0.83686 1.00154 1.87948 1.20128 1.26597 1.94571 1.23399 0.81587 0.97773 0.96575 0.89057 1.23632 0.97582 0.98528 0.98511 1.22151 0.97986 0.82844 0.94655 0.86261 1.45595 1.17090 1.11605 1.62367 1.16852 0.81613 0.85887 0.76424 1.90779 1.44137 1.50770 1.57116 1.19620 0.96010 0.96031 1.21354 1.19292 0.95253 0.84207 0.96374 1.20698 0.89645 1.02297 0.98283 1.20414 0.97047 0.93697 0.96027 1.25076 0.83627 1.00014 1.09709 1.86706 1.50914 1.26252 1.68877 0.94405 0.87036 0.84027 0.75107 1.20702 0.97094 0.95663 1.04911 1.21515 0.86102 0.98080 0.94577 1.46084 1.11830 1.07610 1.37567 1.77650 0.89327 1.22938 1.23410 1.24084 0.99291 0.89006 0.93663 1.24022 0.98602 1.00329 0.97754 0.91813 0.91806 0.90990 0.93245 0.93247 0.90030 0.88519 0.76557 0.81722 0.85571 0.77710 1.17132 1.17689 0.82609 0.80571 0.78445 0.88755 0.90610 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.10 10.28 37.16 0.38 0.48 16 2 C 0.06 -0.01 6.50 37.16 0.24 0.23 16 3 O -0.37 -0.56 10.35 -35.23 -0.36 -0.92 16 4 C 0.07 -0.02 4.31 -25.92 -0.11 -0.13 16 5 H 0.09 -0.13 7.87 -51.93 -0.41 -0.54 16 6 C -0.14 0.16 7.66 -25.92 -0.20 -0.04 16 7 C 0.13 0.00 4.24 -67.12 -0.28 -0.29 16 8 H 0.12 0.13 7.46 -51.93 -0.39 -0.25 16 9 N -0.72 -0.04 5.35 -54.36 -0.29 -0.33 16 10 C 0.60 1.80 7.78 -12.90 -0.10 1.70 16 11 O -0.55 -3.28 15.30 5.17 0.08 -3.20 16 12 C -0.32 -0.77 6.17 -104.68 -0.65 -1.41 16 13 C 0.17 0.46 6.76 -84.07 -0.57 -0.11 16 14 C -0.09 -0.12 9.35 -39.53 -0.37 -0.49 16 15 C -0.07 0.04 4.53 -104.55 -0.47 -0.43 16 16 C -0.08 0.10 2.84 36.01 0.10 0.20 16 17 O -0.52 0.02 12.87 -35.23 -0.45 -0.44 16 18 Si 0.70 -1.56 31.97 -169.99 -5.43 -6.99 16 19 C -0.16 0.33 8.38 -39.95 -0.33 0.00 16 20 C 0.12 -0.12 11.17 -16.68 -0.19 -0.30 16 21 N -0.27 -0.54 3.86 -10.55 -0.04 -0.58 16 22 N -0.31 -0.82 12.58 30.75 0.39 -0.44 16 23 C 0.12 0.09 11.44 -17.14 -0.20 -0.11 16 24 C -0.17 0.01 7.71 -25.92 -0.20 -0.19 16 25 H 0.06 -0.01 8.14 -51.93 -0.42 -0.44 16 26 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 27 H 0.07 -0.13 8.14 -51.93 -0.42 -0.56 16 28 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 29 H 0.05 -0.03 8.14 -51.93 -0.42 -0.46 16 30 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 31 H 0.10 -0.13 8.12 -51.93 -0.42 -0.55 16 32 H 0.40 -1.00 7.65 -40.82 -0.31 -1.31 16 33 H 0.17 0.27 7.01 -52.49 -0.37 -0.10 16 34 H 0.13 -0.21 7.70 -51.93 -0.40 -0.61 16 35 H 0.38 -1.37 8.08 45.56 0.37 -1.00 16 36 H -0.25 -0.25 7.11 56.52 0.40 0.16 16 37 H -0.25 0.30 7.05 56.52 0.40 0.69 16 38 H 0.16 -0.76 7.26 -52.49 -0.38 -1.14 16 39 H 0.18 -0.65 8.06 -52.49 -0.42 -1.07 16 40 H 0.20 -0.68 7.46 -52.48 -0.39 -1.07 16 41 H 0.09 0.03 8.14 -51.93 -0.42 -0.39 16 42 H 0.08 0.02 8.14 -51.93 -0.42 -0.41 16 LS Contribution 357.38 15.07 5.39 5.39 Total: 0.00 -9.50 357.38 -9.38 -18.89 By element: Atomic # 1 Polarization: -4.79 SS G_CDS: -5.71 Total: -10.49 kcal Atomic # 6 Polarization: 2.06 SS G_CDS: -2.94 Total: -0.88 kcal Atomic # 7 Polarization: -1.40 SS G_CDS: 0.06 Total: -1.34 kcal Atomic # 8 Polarization: -3.82 SS G_CDS: -0.74 Total: -4.56 kcal Atomic # 14 Polarization: -1.56 SS G_CDS: -5.43 Total: -6.99 kcal Total LS contribution 5.39 Total: 5.39 kcal Total: -9.50 -9.38 -18.89 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10905468_11618758.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 40.011 kcal (2) G-P(sol) polarization free energy of solvation -9.502 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 30.509 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.385 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.887 kcal (6) G-S(sol) free energy of system = (1) + (5) 21.124 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds