Wall clock time and date at job start Sat Mar 6 2021 13:17:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 O 1.42902 * 109.47478 * 2 1 4 4 C 1.42898 * 113.99945 * 180.02562 * 3 2 1 5 5 H 1.09002 * 112.85240 * 20.32953 * 4 3 2 6 6 C 1.53781 * 113.61632 * 151.52718 * 4 3 2 7 7 C 1.53777 * 87.08336 * 140.05947 * 6 4 3 8 8 H 1.09003 * 113.60961 * 89.20081 * 7 6 4 9 9 N 1.46500 * 113.61534 * 220.01705 * 7 6 4 10 10 C 1.34779 * 119.99895 * 204.99945 * 9 7 6 11 11 O 1.21616 * 119.99945 * 0.02562 * 10 9 7 12 12 C 1.47297 * 119.99581 * 180.02562 * 10 9 7 13 13 C 1.40299 * 120.13260 * 180.02562 * 12 10 9 14 14 O 1.35660 * 120.11851 * 0.02562 * 13 12 10 15 15 C 1.42898 * 116.99921 * 180.02562 * 14 13 12 16 16 C 1.38440 * 119.75996 * 179.97438 * 13 12 10 17 17 C 1.38685 * 120.03588 * 0.02562 * 16 13 12 18 18 O 1.35711 * 119.86794 * 179.97438 * 17 16 13 19 19 C 1.42897 * 116.99716 * 0.02562 * 18 17 16 20 20 C 1.39187 * 120.26792 * 359.97438 * 17 16 13 21 21 C 1.50705 * 119.87908 * 179.97438 * 20 17 16 22 22 O 1.42899 * 109.47270 * 74.99938 * 21 20 17 23 23 Si 1.86302 * 109.47136 * 195.00004 * 21 20 17 24 24 C 1.37546 * 120.24525 * 359.73956 * 20 17 16 25 25 C 1.53775 * 87.07992 * 334.56762 * 7 6 4 26 26 H 1.08998 * 109.46956 * 60.00335 * 1 2 3 27 27 H 1.08999 * 109.47919 * 180.02562 * 1 2 3 28 28 H 1.08997 * 109.47484 * 300.00798 * 1 2 3 29 29 H 1.08997 * 109.47484 * 239.99201 * 2 1 3 30 30 H 1.09004 * 109.46529 * 119.99753 * 2 1 3 31 31 H 1.08997 * 113.61673 * 254.61496 * 6 4 3 32 32 H 1.09005 * 113.61396 * 25.51324 * 6 4 3 33 33 H 0.97002 * 120.00084 * 25.00713 * 9 7 6 34 34 H 1.09003 * 109.47155 * 300.00079 * 15 14 13 35 35 H 1.09004 * 109.47564 * 59.99131 * 15 14 13 36 36 H 1.08992 * 109.47487 * 179.97438 * 15 14 13 37 37 H 1.08000 * 119.98413 * 180.02562 * 16 13 12 38 38 H 1.08997 * 109.47531 * 59.99834 * 19 18 17 39 39 H 1.09000 * 109.47011 * 179.97438 * 19 18 17 40 40 H 1.08995 * 109.47127 * 299.99731 * 19 18 17 41 41 H 1.09005 * 109.46557 * 314.99853 * 21 20 17 42 42 H 0.96700 * 113.99810 * 59.99826 * 22 21 20 43 43 H 1.48497 * 109.99533 * 179.97438 * 23 21 20 44 44 H 1.48493 * 109.99913 * 301.31616 * 23 21 20 45 45 H 1.07998 * 120.01949 * 180.27929 * 24 20 17 46 46 H 1.08993 * 113.61636 * 270.87622 * 25 7 6 47 47 H 1.09008 * 113.61006 * 139.97865 * 25 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0064 1.3473 0.0000 4 6 3.4309 1.4600 -0.0006 5 1 3.9271 0.5545 -0.3499 6 6 3.9471 2.7434 -0.6723 7 6 4.9924 2.8183 0.4530 8 1 5.9160 2.2853 0.2271 9 7 5.2262 4.1774 0.9473 10 6 6.4015 4.4903 1.5282 11 8 7.2680 3.6445 1.6416 12 6 6.6363 5.8567 2.0257 13 6 7.8588 6.1857 2.6304 14 8 8.8293 5.2465 2.7586 15 6 10.0474 5.6538 3.3850 16 6 8.0714 7.4724 3.0948 17 6 7.0782 8.4312 2.9624 18 8 7.2901 9.6914 3.4193 19 6 8.5573 9.9578 4.0236 20 6 5.8649 8.1063 2.3627 21 6 4.7914 9.1549 2.2238 22 8 5.1422 10.0596 1.1748 23 14 3.1693 8.3332 1.8186 24 6 5.6437 6.8329 1.8920 25 6 4.0076 2.0103 1.3145 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3635 -1.0276 0.0005 28 1 -0.3634 0.5139 0.8899 29 1 1.8933 -0.5139 -0.8899 30 1 1.8932 -0.5138 0.8901 31 1 4.3789 2.5765 -1.6591 32 1 3.2292 3.5635 -0.6566 33 1 4.5352 4.8521 0.8567 34 1 10.4977 6.4640 2.8115 35 1 9.8378 5.9985 4.3976 36 1 10.7358 4.8097 3.4242 37 1 9.0113 7.7297 3.5605 38 1 9.3512 9.7711 3.3004 39 1 8.5955 10.9990 4.3437 40 1 8.6921 9.3066 4.8872 41 1 4.6966 9.7039 3.1607 42 1 5.2437 9.6389 0.3101 43 1 2.1024 9.3566 1.6797 44 1 3.2945 7.5552 0.5600 45 1 4.7026 6.5860 1.4233 46 1 3.3064 2.6299 1.8734 47 1 4.4885 1.2514 1.9317 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10905468_12297780.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:17:02 Heat of formation + Delta-G solvation = -121.304979 kcal Electronic energy + Delta-G solvation = -30034.675294 eV Core-core repulsion = 25765.638490 eV Total energy + Delta-G solvation = -4269.036804 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.165 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -42.05939 -40.97822 -40.12557 -39.42001 -38.47947 -37.40236 -36.97564 -34.20781 -32.22149 -31.94985 -31.38593 -29.07862 -28.27824 -26.75876 -26.16506 -25.63924 -24.13512 -23.66138 -22.65291 -21.44205 -20.96238 -19.99494 -18.78944 -18.33804 -17.99853 -17.84855 -17.20948 -16.83797 -16.63908 -16.59694 -16.45696 -16.30844 -16.14026 -15.80393 -15.66350 -15.51377 -15.32377 -14.71742 -14.44800 -14.25118 -14.03001 -13.90952 -13.57988 -13.48036 -13.45950 -13.22118 -12.76918 -12.74726 -12.59725 -12.55313 -12.45391 -12.21527 -12.05673 -11.93540 -11.79431 -11.73454 -11.66425 -10.66087 -10.54010 -10.38899 -9.95494 -9.88331 -9.12326 -5.00527 -0.18607 0.12863 1.25024 1.48406 1.85170 1.93527 2.06283 2.13408 2.16471 2.70533 2.83021 3.42024 3.43187 3.47386 3.56653 3.62196 3.73678 3.81102 3.85923 3.87833 3.99573 4.05954 4.11534 4.13703 4.15044 4.15410 4.23538 4.26777 4.40220 4.44098 4.45091 4.52086 4.58359 4.69741 4.73696 4.79163 4.79783 4.91686 4.94879 5.00660 5.02052 5.04556 5.13220 5.24027 5.31591 5.59359 6.01733 6.29679 6.31037 6.46709 6.60015 7.39468 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C 0.055 3.945 3 O -0.373 6.373 4 C 0.066 3.934 5 H 0.091 0.909 6 C -0.145 4.145 7 C 0.127 3.873 8 H 0.120 0.880 9 N -0.720 5.720 10 C 0.568 3.432 11 O -0.519 6.519 12 C -0.209 4.209 13 C 0.235 3.765 14 O -0.274 6.274 15 C 0.018 3.982 16 C -0.314 4.314 17 C 0.224 3.776 18 O -0.295 6.295 19 C 0.021 3.979 20 C -0.195 4.195 21 C -0.057 4.057 22 O -0.524 6.524 23 Si 0.680 3.320 24 C -0.013 4.013 25 C -0.169 4.169 26 H 0.063 0.937 27 H 0.071 0.929 28 H 0.063 0.937 29 H 0.049 0.951 30 H 0.049 0.951 31 H 0.081 0.919 32 H 0.096 0.904 33 H 0.398 0.602 34 H 0.057 0.943 35 H 0.058 0.942 36 H 0.107 0.893 37 H 0.145 0.855 38 H 0.059 0.941 39 H 0.107 0.893 40 H 0.059 0.941 41 H 0.119 0.881 42 H 0.372 0.628 43 H -0.253 1.253 44 H -0.257 1.257 45 H 0.140 0.860 46 H 0.095 0.905 47 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.106 -0.235 1.785 1.803 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.210 4.210 2 C -0.021 4.021 3 O -0.292 6.292 4 C 0.007 3.993 5 H 0.109 0.891 6 C -0.183 4.183 7 C 0.022 3.978 8 H 0.138 0.862 9 N -0.373 5.373 10 C 0.356 3.644 11 O -0.395 6.395 12 C -0.213 4.213 13 C 0.185 3.815 14 O -0.184 6.184 15 C -0.077 4.077 16 C -0.334 4.334 17 C 0.176 3.824 18 O -0.206 6.206 19 C -0.073 4.073 20 C -0.196 4.196 21 C -0.167 4.167 22 O -0.330 6.330 23 Si 0.581 3.419 24 C -0.031 4.031 25 C -0.208 4.208 26 H 0.082 0.918 27 H 0.090 0.910 28 H 0.082 0.918 29 H 0.067 0.933 30 H 0.068 0.932 31 H 0.100 0.900 32 H 0.114 0.886 33 H 0.233 0.767 34 H 0.076 0.924 35 H 0.077 0.923 36 H 0.125 0.875 37 H 0.162 0.838 38 H 0.077 0.923 39 H 0.125 0.875 40 H 0.078 0.922 41 H 0.136 0.864 42 H 0.219 0.781 43 H -0.177 1.177 44 H -0.182 1.182 45 H 0.157 0.843 46 H 0.114 0.886 47 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges -0.162 -0.371 1.729 1.776 hybrid contribution 1.013 0.598 -0.700 1.369 sum 0.851 0.227 1.029 1.355 Atomic orbital electron populations 1.21757 0.93610 1.02455 1.03196 1.22538 0.95741 0.83678 1.00159 1.87946 1.20088 1.26604 1.94577 1.23389 0.81599 0.97724 0.96566 0.89067 1.23630 0.97561 0.98449 0.98644 1.22172 0.98026 0.83108 0.94466 0.86216 1.45804 1.17087 1.12602 1.61795 1.17832 0.81898 0.87149 0.77538 1.90840 1.43476 1.49520 1.55620 1.19037 0.94510 0.95247 1.12548 1.18728 0.87407 0.86775 0.88561 1.86401 1.23393 1.34908 1.73693 1.23241 0.84678 1.02718 0.97021 1.21301 1.02721 0.93843 1.15523 1.18712 0.91967 0.83243 0.88526 1.86160 1.36750 1.25943 1.71781 1.23213 0.83457 1.03366 0.97303 1.19367 0.95952 0.95868 1.08394 1.24792 1.03158 0.94108 0.94646 1.86653 1.90931 1.35935 1.19472 0.95203 0.76658 0.83104 0.86906 1.20903 0.97307 0.90922 0.94006 1.24032 0.98586 1.00369 0.97772 0.91825 0.90996 0.91775 0.93272 0.93228 0.90001 0.88578 0.76700 0.92432 0.92348 0.87476 0.83772 0.92283 0.87503 0.92192 0.86357 0.78051 1.17728 1.18194 0.84265 0.88617 0.90556 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.10 10.28 37.16 0.38 0.48 16 2 C 0.06 0.00 6.50 37.16 0.24 0.24 16 3 O -0.37 -0.59 10.36 -35.23 -0.36 -0.95 16 4 C 0.07 -0.01 4.30 -25.92 -0.11 -0.12 16 5 H 0.09 -0.11 7.88 -51.93 -0.41 -0.52 16 6 C -0.14 0.10 7.66 -25.92 -0.20 -0.10 16 7 C 0.13 0.05 4.24 -67.12 -0.28 -0.23 16 8 H 0.12 0.19 7.46 -51.93 -0.39 -0.20 16 9 N -0.72 -0.52 5.30 -54.14 -0.29 -0.81 16 10 C 0.57 2.07 7.76 -12.58 -0.10 1.98 16 11 O -0.52 -3.76 14.75 -16.66 -0.25 -4.01 16 12 C -0.21 -0.50 5.89 -104.83 -0.62 -1.12 16 13 C 0.23 0.64 6.70 -38.73 -0.26 0.38 16 14 O -0.27 -0.97 8.56 -40.61 -0.35 -1.32 16 15 C 0.02 -0.02 9.81 101.05 0.99 0.98 16 16 C -0.31 -0.27 8.01 -39.34 -0.31 -0.58 16 17 C 0.22 0.29 6.67 -39.06 -0.26 0.03 16 18 O -0.30 -0.36 9.80 -18.84 -0.18 -0.55 16 19 C 0.02 -0.05 9.80 101.05 0.99 0.94 16 20 C -0.19 -0.12 5.27 -104.52 -0.55 -0.67 16 21 C -0.06 -0.01 2.37 36.01 0.09 0.07 16 22 O -0.52 -0.88 12.88 -35.23 -0.45 -1.33 16 23 Si 0.68 -0.90 30.25 -169.99 -5.14 -6.05 16 24 C -0.01 0.00 8.14 -39.23 -0.32 -0.32 16 25 C -0.17 -0.02 7.71 -25.92 -0.20 -0.22 16 26 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 27 H 0.07 -0.13 8.14 -51.93 -0.42 -0.56 16 28 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 29 H 0.05 -0.04 8.14 -51.93 -0.42 -0.47 16 30 H 0.05 -0.03 8.14 -51.93 -0.42 -0.45 16 31 H 0.08 -0.10 8.14 -51.93 -0.42 -0.53 16 32 H 0.10 -0.08 8.12 -51.93 -0.42 -0.51 16 33 H 0.40 -0.62 6.75 -40.82 -0.28 -0.89 16 34 H 0.06 -0.12 7.66 -51.93 -0.40 -0.52 16 35 H 0.06 -0.13 7.66 -51.93 -0.40 -0.53 16 36 H 0.11 -0.20 8.14 -51.93 -0.42 -0.62 16 37 H 0.14 -0.20 4.50 -52.49 -0.24 -0.44 16 38 H 0.06 -0.17 7.65 -51.93 -0.40 -0.57 16 39 H 0.11 -0.37 8.14 -51.93 -0.42 -0.80 16 40 H 0.06 -0.20 7.65 -51.93 -0.40 -0.60 16 41 H 0.12 0.03 7.82 -51.93 -0.41 -0.38 16 42 H 0.37 -0.52 8.70 45.56 0.40 -0.12 16 43 H -0.25 -0.51 7.11 56.52 0.40 -0.11 16 44 H -0.26 0.20 6.67 56.52 0.38 0.57 16 45 H 0.14 -0.29 3.17 -52.49 -0.17 -0.46 16 46 H 0.10 0.03 8.14 -51.93 -0.42 -0.40 16 47 H 0.08 0.03 8.14 -51.92 -0.42 -0.39 16 LS Contribution 383.19 15.07 5.77 5.77 Total: 0.00 -9.13 383.19 -8.72 -17.85 By element: Atomic # 1 Polarization: -3.40 SS G_CDS: -6.94 Total: -10.34 kcal Atomic # 6 Polarization: 2.26 SS G_CDS: -0.52 Total: 1.74 kcal Atomic # 7 Polarization: -0.52 SS G_CDS: -0.29 Total: -0.81 kcal Atomic # 8 Polarization: -6.56 SS G_CDS: -1.60 Total: -8.16 kcal Atomic # 14 Polarization: -0.90 SS G_CDS: -5.14 Total: -6.05 kcal Total LS contribution 5.77 Total: 5.77 kcal Total: -9.13 -8.72 -17.85 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10905468_12297780.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -103.459 kcal (2) G-P(sol) polarization free energy of solvation -9.127 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -112.587 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.718 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.846 kcal (6) G-S(sol) free energy of system = (1) + (5) -121.305 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds