Wall clock time and date at job start Sat Mar 6 2021 13:17:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 O 1.42892 * 109.47729 * 2 1 4 4 C 1.42900 * 114.00576 * 180.02562 * 3 2 1 5 5 H 1.09006 * 112.84350 * 341.18797 * 4 3 2 6 6 C 1.53776 * 113.62097 * 112.49579 * 4 3 2 7 7 C 1.53780 * 87.08337 * 139.98222 * 6 4 3 8 8 H 1.08997 * 113.68813 * 89.12670 * 7 6 4 9 9 N 1.46498 * 113.61480 * 220.02116 * 7 6 4 10 10 C 1.34777 * 119.99929 * 252.49455 * 9 7 6 11 11 O 1.21550 * 119.99988 * 0.02562 * 10 9 7 12 12 C 1.47855 * 119.99697 * 180.02562 * 10 9 7 13 13 C 1.39468 * 120.10882 * 179.72369 * 12 10 9 14 14 C 1.38587 * 119.78461 * 180.27374 * 13 12 10 15 15 N 1.40231 * 119.99683 * 179.97438 * 14 13 12 16 16 C 1.36559 * 125.66501 * 64.70025 * 15 14 13 17 17 C 1.50701 * 125.90026 * 359.97438 * 16 15 14 18 18 C 1.34845 * 108.20187 * 179.82942 * 16 15 14 19 19 C 1.40950 * 107.46448 * 0.42404 * 18 16 15 20 20 C 1.50700 * 126.26482 * 179.71417 * 19 18 16 21 21 O 1.42898 * 109.46985 * 105.02640 * 20 19 18 22 22 Si 1.86300 * 109.47168 * 345.02341 * 20 19 18 23 23 C 1.34846 * 107.46478 * 359.73661 * 19 18 16 24 24 C 1.50698 * 125.89704 * 180.02562 * 23 19 18 25 25 C 1.38915 * 120.00976 * 0.02562 * 14 13 12 26 26 C 1.38266 * 120.22554 * 359.97438 * 25 14 13 27 27 C 1.37968 * 120.21939 * 0.02562 * 26 25 14 28 28 C 1.53780 * 113.61760 * 210.00033 * 4 3 2 29 29 H 1.09006 * 109.46610 * 60.00281 * 1 2 3 30 30 H 1.09001 * 109.47691 * 179.97438 * 1 2 3 31 31 H 1.09001 * 109.47241 * 300.01098 * 1 2 3 32 32 H 1.09001 * 109.47241 * 239.98902 * 2 1 3 33 33 H 1.09006 * 109.46610 * 119.99719 * 2 1 3 34 34 H 1.09009 * 113.61065 * 25.43460 * 6 4 3 35 35 H 1.08998 * 113.61473 * 254.53519 * 6 4 3 36 36 H 0.96998 * 119.99778 * 72.50415 * 9 7 6 37 37 H 1.07995 * 120.11190 * 0.26240 * 13 12 10 38 38 H 1.09003 * 109.46772 * 90.00344 * 17 16 15 39 39 H 1.09004 * 109.47443 * 210.00082 * 17 16 15 40 40 H 1.09005 * 109.47571 * 330.00647 * 17 16 15 41 41 H 1.07996 * 126.27178 * 180.18091 * 18 16 15 42 42 H 1.09000 * 109.46780 * 225.02819 * 20 19 18 43 43 H 0.96700 * 113.99740 * 299.99127 * 21 20 19 44 44 H 1.48497 * 109.99962 * 58.68599 * 22 20 19 45 45 H 1.48504 * 109.99890 * 180.02562 * 22 20 19 46 46 H 1.09006 * 109.47086 * 269.95153 * 24 23 19 47 47 H 1.08996 * 109.47564 * 29.95624 * 24 23 19 48 48 H 1.09005 * 109.47107 * 149.95939 * 24 23 19 49 49 H 1.08001 * 119.88489 * 180.02562 * 25 14 13 50 50 H 1.08000 * 119.88744 * 179.97438 * 26 25 14 51 51 H 1.08002 * 120.00735 * 180.02562 * 27 26 25 52 52 H 1.08996 * 113.61907 * 105.46424 * 28 4 3 53 53 H 1.09002 * 113.68931 * 334.57065 * 28 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0064 1.3472 0.0000 4 6 3.4309 1.4600 -0.0006 5 1 3.9280 0.5454 0.3230 6 6 4.0021 2.0462 -1.3025 7 6 4.9898 2.8312 -0.4232 8 1 5.9146 2.2929 -0.2157 9 7 5.2208 4.2034 -0.8814 10 6 6.3935 4.5328 -1.4582 11 8 7.2593 3.6913 -1.5987 12 6 6.6268 5.9179 -1.9200 13 6 7.8416 6.2628 -2.5120 14 6 8.0552 7.5644 -2.9373 15 7 9.2752 7.9161 -3.5326 16 6 9.7490 7.4369 -4.7203 17 6 9.0526 6.4421 -5.6127 18 6 10.9461 8.0101 -4.9583 19 6 11.2276 8.8670 -3.8752 20 6 12.4630 9.7134 -3.7058 21 8 12.1436 11.0807 -3.9714 22 14 13.7766 9.1399 -4.8959 23 6 10.1895 8.7904 -3.0181 24 6 10.0602 9.5404 -1.7174 25 6 7.0613 8.5209 -2.7730 26 6 5.8568 8.1795 -2.1862 27 6 5.6342 6.8865 -1.7594 28 6 3.9491 2.7249 0.7039 29 1 -0.3633 0.5138 -0.8901 30 1 -0.3634 -1.0276 -0.0005 31 1 -0.3634 0.5140 0.8899 32 1 1.8933 -0.5140 -0.8899 33 1 1.8932 -0.5138 0.8901 34 1 3.2981 2.6804 -1.8414 35 1 4.4808 1.3047 -1.9421 36 1 4.5298 4.8748 -0.7694 37 1 8.6134 5.5181 -2.6384 38 1 8.4200 6.9728 -6.3242 39 1 9.7960 5.8566 -6.1538 40 1 8.4381 5.7772 -5.0057 41 1 11.5760 7.8404 -5.8190 42 1 12.8314 9.6181 -2.6844 43 1 11.8089 11.2400 -4.8646 44 1 13.2751 9.2349 -6.2904 45 1 15.0003 9.9664 -4.7384 46 1 10.4919 8.9470 -0.9113 47 1 10.5885 10.4909 -1.7920 48 1 9.0067 9.7258 -1.5080 49 1 7.2298 9.5345 -3.1055 50 1 5.0881 8.9276 -2.0608 51 1 4.6919 6.6234 -1.3018 52 1 4.3850 2.5314 1.6839 53 1 3.2315 3.5454 0.7143 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10905468_12335854.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:17:17 Heat of formation + Delta-G solvation = -4.936574 kcal Electronic energy + Delta-G solvation = -33060.653245 eV Core-core repulsion = 28672.847367 eV Total energy + Delta-G solvation = -4387.805878 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 371.193 amu Computer time = 1.45 seconds Orbital eigenvalues (eV) -42.92641 -41.56039 -40.34514 -39.28527 -37.83575 -37.53278 -34.91189 -33.98462 -33.73841 -32.34644 -31.71852 -30.43746 -30.16870 -27.25671 -26.80275 -26.27077 -24.81289 -24.19941 -23.70509 -23.60915 -21.96300 -21.23372 -20.98473 -20.27285 -18.74325 -18.40184 -17.61899 -17.43333 -17.38997 -17.11015 -16.65619 -16.55694 -16.36655 -16.01037 -15.97013 -15.50395 -15.37045 -15.09194 -15.00871 -14.71307 -14.49082 -14.33171 -14.15356 -14.13638 -14.01022 -13.64422 -13.50519 -13.47739 -13.43142 -13.27900 -13.22156 -12.94067 -12.81308 -12.70253 -12.52276 -12.47669 -12.16916 -12.13817 -11.96337 -11.78853 -11.70903 -11.19691 -10.57213 -10.44331 -10.39273 -10.30968 -10.08744 -9.55048 -8.86024 -4.84736 -0.46357 -0.06482 1.06569 1.41646 1.59764 1.63677 1.71403 1.75158 1.95624 2.02742 2.55525 2.79580 3.37309 3.48618 3.51861 3.56220 3.65692 3.66837 3.77891 3.84700 3.87101 3.91651 3.96052 4.08787 4.16875 4.17824 4.23362 4.31183 4.36515 4.40243 4.44413 4.49084 4.60299 4.63709 4.65992 4.67118 4.68706 4.70609 4.71227 4.81620 4.91450 4.94508 4.96688 4.98040 5.00603 5.02367 5.03731 5.05622 5.12111 5.15211 5.26389 5.33077 5.39560 5.52612 5.95603 6.12209 6.28078 6.36732 6.44068 6.57518 7.02127 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.152 4.152 2 C 0.049 3.951 3 O -0.390 6.390 4 C 0.063 3.937 5 H 0.101 0.899 6 C -0.166 4.166 7 C 0.121 3.879 8 H 0.106 0.894 9 N -0.696 5.696 10 C 0.560 3.440 11 O -0.577 6.577 12 C -0.132 4.132 13 C -0.064 4.064 14 C 0.098 3.902 15 N -0.405 5.405 16 C 0.014 3.986 17 C -0.085 4.085 18 C -0.198 4.198 19 C -0.202 4.202 20 C -0.044 4.044 21 O -0.550 6.550 22 Si 0.768 3.232 23 C 0.040 3.960 24 C -0.085 4.085 25 C -0.086 4.086 26 C -0.100 4.100 27 C -0.066 4.066 28 C -0.132 4.132 29 H 0.057 0.943 30 H 0.084 0.916 31 H 0.059 0.941 32 H 0.053 0.947 33 H 0.058 0.942 34 H 0.094 0.906 35 H 0.069 0.931 36 H 0.417 0.583 37 H 0.120 0.880 38 H 0.077 0.923 39 H 0.095 0.905 40 H 0.058 0.942 41 H 0.151 0.849 42 H 0.113 0.887 43 H 0.382 0.618 44 H -0.285 1.285 45 H -0.303 1.303 46 H 0.075 0.925 47 H 0.086 0.914 48 H 0.070 0.930 49 H 0.141 0.859 50 H 0.174 0.826 51 H 0.167 0.833 52 H 0.091 0.909 53 H 0.105 0.895 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.010 -1.300 2.358 7.509 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.209 4.209 2 C -0.027 4.027 3 O -0.309 6.309 4 C 0.004 3.996 5 H 0.119 0.881 6 C -0.205 4.205 7 C 0.016 3.984 8 H 0.124 0.876 9 N -0.348 5.348 10 C 0.348 3.652 11 O -0.457 6.457 12 C -0.136 4.136 13 C -0.084 4.084 14 C 0.009 3.991 15 N -0.080 5.080 16 C -0.094 4.094 17 C -0.142 4.142 18 C -0.222 4.222 19 C -0.208 4.208 20 C -0.153 4.153 21 O -0.358 6.358 22 Si 0.674 3.326 23 C -0.069 4.069 24 C -0.142 4.142 25 C -0.105 4.105 26 C -0.118 4.118 27 C -0.084 4.084 28 C -0.170 4.170 29 H 0.076 0.924 30 H 0.103 0.897 31 H 0.078 0.922 32 H 0.071 0.929 33 H 0.076 0.924 34 H 0.112 0.888 35 H 0.088 0.912 36 H 0.256 0.744 37 H 0.138 0.862 38 H 0.096 0.904 39 H 0.113 0.887 40 H 0.077 0.923 41 H 0.168 0.832 42 H 0.131 0.869 43 H 0.231 0.769 44 H -0.212 1.212 45 H -0.231 1.231 46 H 0.094 0.906 47 H 0.105 0.895 48 H 0.089 0.911 49 H 0.159 0.841 50 H 0.191 0.809 51 H 0.185 0.815 52 H 0.110 0.890 53 H 0.124 0.876 Dipole moment (debyes) X Y Z Total from point charges -6.127 -1.566 2.352 6.747 hybrid contribution -0.510 0.741 -0.651 1.111 sum -6.638 -0.824 1.701 6.902 Atomic orbital electron populations 1.21772 0.93326 1.03182 1.02667 1.22672 0.96063 0.83178 1.00762 1.87916 1.20797 1.27586 1.94647 1.23488 0.81196 0.98627 0.96265 0.88076 1.23989 0.98336 1.00188 0.97969 1.22212 0.97930 0.82452 0.95772 0.87584 1.45695 1.16523 1.12418 1.60154 1.18448 0.82083 0.87627 0.77056 1.90789 1.45434 1.52016 1.57482 1.19733 0.95852 0.93746 1.04269 1.21132 0.97094 0.95147 0.95057 1.17659 0.86269 0.93962 1.01226 1.41499 1.14111 1.35196 1.17187 1.20740 0.96754 1.03053 0.88828 1.20398 1.00622 0.95894 0.97333 1.20793 0.97401 1.02775 1.01195 1.19680 0.98397 1.05343 0.97397 1.24406 0.99736 0.82097 1.09110 1.86523 1.86490 1.25397 1.37345 0.93814 0.74451 0.88460 0.75888 1.20588 0.90369 0.97206 0.98769 1.20392 1.03152 0.99578 0.91126 1.21637 0.92311 0.99506 0.97058 1.21429 0.96736 0.97050 0.96614 1.21778 0.98543 0.92160 0.95920 1.23570 0.96787 0.98387 0.98239 0.92414 0.89720 0.92173 0.92917 0.92374 0.88763 0.91236 0.74422 0.86177 0.90427 0.88664 0.92313 0.83154 0.86904 0.76893 1.21169 1.23103 0.90648 0.89536 0.91079 0.84136 0.80863 0.81515 0.89045 0.87618 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.39 10.28 71.98 0.74 1.13 16 2 C 0.05 -0.08 6.50 71.98 0.47 0.38 16 3 O -0.39 -0.48 10.35 -148.98 -1.54 -2.03 16 4 C 0.06 -0.14 4.31 31.12 0.13 -0.01 16 5 H 0.10 -0.43 7.87 -2.38 -0.02 -0.45 16 6 C -0.17 0.24 7.71 31.12 0.24 0.48 16 7 C 0.12 -0.20 4.24 45.52 0.19 -0.01 16 8 H 0.11 0.20 7.46 -2.39 -0.02 0.18 16 9 N -0.70 1.79 5.31 -442.90 -2.35 -0.56 16 10 C 0.56 2.30 7.77 86.79 0.67 2.97 16 11 O -0.58 -7.56 15.94 -3.87 -0.06 -7.62 16 12 C -0.13 -0.10 5.87 -20.10 -0.12 -0.22 16 13 C -0.06 -0.28 8.29 22.65 0.19 -0.09 16 14 C 0.10 0.28 5.02 38.04 0.19 0.47 16 15 N -0.40 -2.19 2.79 -320.38 -0.89 -3.08 16 16 C 0.01 0.08 6.80 41.04 0.28 0.36 16 17 C -0.09 -0.14 10.08 71.24 0.72 0.58 16 18 C -0.20 -1.04 9.27 22.15 0.21 -0.83 16 19 C -0.20 -1.11 5.35 -19.98 -0.11 -1.22 16 20 C -0.04 -0.17 2.50 71.24 0.18 0.01 16 21 O -0.55 -3.15 12.88 -148.98 -1.92 -5.07 16 22 Si 0.77 1.86 30.86 68.60 2.12 3.98 16 23 C 0.04 0.23 6.81 41.04 0.28 0.51 16 24 C -0.09 -0.16 9.87 71.24 0.70 0.54 16 25 C -0.09 0.18 8.76 22.44 0.20 0.38 16 26 C -0.10 0.71 10.02 22.21 0.22 0.94 16 27 C -0.07 0.43 9.54 22.54 0.21 0.64 16 28 C -0.13 0.62 7.66 31.12 0.24 0.86 16 29 H 0.06 -0.08 8.14 -2.38 -0.02 -0.10 16 30 H 0.08 -0.44 8.14 -2.39 -0.02 -0.46 16 31 H 0.06 -0.11 8.14 -2.39 -0.02 -0.13 16 32 H 0.05 -0.13 8.14 -2.39 -0.02 -0.15 16 33 H 0.06 -0.20 8.14 -2.38 -0.02 -0.22 16 34 H 0.09 -0.12 8.14 -2.38 -0.02 -0.13 16 35 H 0.07 0.01 8.14 -2.39 -0.02 -0.01 16 36 H 0.42 -3.78 6.76 -92.71 -0.63 -4.41 16 37 H 0.12 1.05 7.65 -2.91 -0.02 1.03 16 38 H 0.08 0.01 8.14 -2.39 -0.02 -0.01 16 39 H 0.09 -0.09 8.14 -2.39 -0.02 -0.11 16 40 H 0.06 0.17 6.83 -2.38 -0.02 0.16 16 41 H 0.15 0.40 6.52 -2.91 -0.02 0.38 16 42 H 0.11 0.28 7.96 -2.39 -0.02 0.26 16 43 H 0.38 0.35 8.70 -74.06 -0.64 -0.30 16 44 H -0.29 -1.77 7.01 99.48 0.70 -1.07 16 45 H -0.30 -2.75 7.11 99.48 0.71 -2.05 16 46 H 0.07 0.09 8.14 -2.38 -0.02 0.07 16 47 H 0.09 0.20 7.87 -2.39 -0.02 0.18 16 48 H 0.07 -0.01 6.84 -2.38 -0.02 -0.03 16 49 H 0.14 -0.47 8.06 -2.91 -0.02 -0.49 16 50 H 0.17 -2.31 8.06 -2.91 -0.02 -2.33 16 51 H 0.17 -2.28 6.40 -2.91 -0.02 -2.30 16 52 H 0.09 -0.54 8.14 -2.39 -0.02 -0.56 16 53 H 0.11 -0.65 8.12 -2.39 -0.02 -0.67 16 Total: 0.00 -21.12 433.59 0.88 -20.24 By element: Atomic # 1 Polarization: -13.42 SS G_CDS: -0.31 Total: -13.73 kcal Atomic # 6 Polarization: 2.04 SS G_CDS: 5.84 Total: 7.88 kcal Atomic # 7 Polarization: -0.40 SS G_CDS: -3.24 Total: -3.65 kcal Atomic # 8 Polarization: -11.20 SS G_CDS: -3.52 Total: -14.72 kcal Atomic # 14 Polarization: 1.86 SS G_CDS: 2.12 Total: 3.98 kcal Total: -21.12 0.88 -20.24 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10905468_12335854.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 15.303 kcal (2) G-P(sol) polarization free energy of solvation -21.116 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -5.813 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.877 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.239 kcal (6) G-S(sol) free energy of system = (1) + (5) -4.937 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.45 seconds