Wall clock time and date at job start Sat Mar 6 2021 13:18:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 O 1.42907 * 109.46954 * 2 1 4 4 C 1.42897 * 113.99532 * 179.97438 * 3 2 1 5 5 H 1.09002 * 112.91266 * 18.74954 * 4 3 2 6 6 C 1.53781 * 113.61154 * 150.00175 * 4 3 2 7 7 C 1.53775 * 87.08374 * 139.97790 * 6 4 3 8 8 H 1.09002 * 113.61366 * 89.19681 * 7 6 4 9 9 N 1.46500 * 113.61673 * 220.01549 * 7 6 4 10 10 C 1.34779 * 119.99954 * 205.00110 * 9 7 6 11 11 O 1.21585 * 120.00279 * 359.97438 * 10 9 7 12 12 C 1.47538 * 119.99557 * 180.02562 * 10 9 7 13 13 C 1.40143 * 120.18924 * 179.97438 * 12 10 9 14 14 O 1.35661 * 120.15065 * 0.04099 * 13 12 10 15 15 C 1.38707 * 119.69864 * 180.02562 * 13 12 10 16 16 C 1.38053 * 120.08716 * 0.02562 * 15 13 12 17 17 C 1.50699 * 119.80725 * 179.97438 * 16 15 13 18 18 O 1.42892 * 109.47249 * 300.00041 * 17 16 15 19 19 Si 1.86298 * 109.47032 * 179.97438 * 17 16 15 20 20 C 1.38550 * 120.38605 * 0.25004 * 16 15 13 21 21 C 1.37788 * 120.30318 * 359.49171 * 20 16 15 22 22 C 1.53780 * 87.08083 * 334.56770 * 7 6 4 23 23 H 1.08996 * 109.47005 * 180.02562 * 1 2 3 24 24 H 1.09001 * 109.47397 * 300.00215 * 1 2 3 25 25 H 1.09001 * 109.46779 * 59.99993 * 1 2 3 26 26 H 1.08997 * 109.47034 * 239.99467 * 2 1 3 27 27 H 1.09001 * 109.46704 * 119.99456 * 2 1 3 28 28 H 1.08995 * 113.61884 * 25.42420 * 6 4 3 29 29 H 1.09006 * 113.61424 * 254.52566 * 6 4 3 30 30 H 0.96993 * 119.99657 * 24.99859 * 9 7 6 31 31 H 0.96691 * 113.99894 * 269.97937 * 14 13 12 32 32 H 1.07996 * 119.95220 * 180.02562 * 15 13 12 33 33 H 1.09004 * 109.46453 * 60.00109 * 17 16 15 34 34 H 0.96703 * 114.00176 * 299.99748 * 18 17 16 35 35 H 1.48506 * 109.99834 * 58.68765 * 19 17 16 36 36 H 1.48502 * 110.00011 * 180.02562 * 19 17 16 37 37 H 1.08001 * 119.84561 * 179.72288 * 20 16 15 38 38 H 1.07996 * 120.04631 * 180.25632 * 21 20 16 39 39 H 1.09005 * 113.61285 * 139.98370 * 22 7 6 40 40 H 1.08995 * 113.61057 * 270.87927 * 22 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3474 0.0000 4 6 3.4309 1.4601 0.0006 5 1 3.9291 0.5458 -0.3218 6 6 3.9489 2.7251 -0.7039 7 6 4.9896 2.8315 0.4232 8 1 5.9144 2.2932 0.2158 9 7 5.2205 4.2038 0.8812 10 6 6.3932 4.5334 1.4581 11 8 7.2592 3.6917 1.5988 12 6 6.6254 5.9152 1.9198 13 6 7.8430 6.2622 2.5206 14 8 8.8146 5.3290 2.6799 15 6 8.0503 7.5643 2.9514 16 6 7.0606 8.5129 2.7888 17 6 7.2923 9.9256 3.2597 18 8 7.5443 9.9235 4.6662 19 14 5.7821 10.9556 2.9003 20 6 5.8533 8.1724 2.2004 21 6 5.6323 6.8850 1.7619 22 6 4.0018 2.0466 1.3025 23 1 -0.3633 -1.0276 0.0005 24 1 -0.3634 0.5139 0.8900 25 1 -0.3633 0.5138 -0.8900 26 1 1.8933 -0.5139 -0.8899 27 1 1.8933 -0.5138 0.8901 28 1 3.2305 3.5447 -0.7137 29 1 4.3850 2.5315 -1.6840 30 1 4.5295 4.8751 0.7692 31 1 8.7655 4.8492 3.5179 32 1 8.9872 7.8363 3.4146 33 1 8.1515 10.3463 2.7372 34 1 6.8201 9.5617 5.1951 35 1 4.5971 10.3742 3.5809 36 1 5.9982 12.3512 3.3594 37 1 5.0834 8.9204 2.0817 38 1 4.6913 6.6252 1.3001 39 1 4.4807 1.3052 1.9423 40 1 3.2979 2.6807 1.8413 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10905468_13422076.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:18:39 Heat of formation + Delta-G solvation = -96.643907 kcal Electronic energy + Delta-G solvation = -23187.108141 eV Core-core repulsion = 19548.898151 eV Total energy + Delta-G solvation = -3638.209990 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 294.135 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -41.72522 -40.74673 -39.49545 -38.46431 -37.42503 -37.23379 -34.44369 -32.64843 -31.71952 -31.13477 -27.73515 -26.84309 -25.33896 -23.96049 -23.79818 -23.18930 -21.56128 -21.12697 -19.39742 -18.65205 -18.40157 -18.23332 -17.12300 -16.70453 -16.62506 -16.56558 -16.35503 -16.03387 -15.89873 -15.67711 -15.14057 -14.93252 -14.68850 -14.31111 -14.00338 -13.75489 -13.56627 -13.53317 -13.27948 -13.00263 -12.78860 -12.54227 -12.42031 -12.15925 -12.11869 -11.99494 -11.82553 -11.63810 -10.87156 -10.66459 -10.45651 -10.17822 -10.01869 -9.80922 -5.05945 -0.42763 0.08552 1.14443 1.49326 1.74702 1.87093 2.00582 2.55844 2.75735 3.05634 3.27013 3.35377 3.42985 3.48178 3.60573 3.70035 3.76471 3.80343 3.97062 4.10118 4.18867 4.19115 4.32468 4.35223 4.40106 4.56339 4.62022 4.64935 4.67423 4.73220 4.87200 4.90600 4.94302 4.95235 5.00317 5.11763 5.17373 5.18739 5.46251 5.51376 6.23942 6.26709 6.44666 6.69350 7.20691 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C 0.055 3.945 3 O -0.373 6.373 4 C 0.066 3.934 5 H 0.092 0.908 6 C -0.144 4.144 7 C 0.126 3.874 8 H 0.120 0.880 9 N -0.716 5.716 10 C 0.560 3.440 11 O -0.518 6.518 12 C -0.165 4.165 13 C 0.173 3.827 14 O -0.476 6.476 15 C -0.129 4.129 16 C -0.074 4.074 17 C -0.081 4.081 18 O -0.527 6.527 19 Si 0.689 3.311 20 C -0.136 4.136 21 C -0.065 4.065 22 C -0.168 4.168 23 H 0.072 0.928 24 H 0.063 0.937 25 H 0.063 0.937 26 H 0.050 0.950 27 H 0.049 0.951 28 H 0.097 0.903 29 H 0.082 0.918 30 H 0.401 0.599 31 H 0.398 0.602 32 H 0.141 0.859 33 H 0.124 0.876 34 H 0.377 0.623 35 H -0.258 1.258 36 H -0.255 1.255 37 H 0.136 0.864 38 H 0.134 0.866 39 H 0.075 0.925 40 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.494 0.372 -1.521 4.759 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.210 4.210 2 C -0.021 4.021 3 O -0.292 6.292 4 C 0.007 3.993 5 H 0.110 0.890 6 C -0.182 4.182 7 C 0.021 3.979 8 H 0.138 0.862 9 N -0.368 5.368 10 C 0.348 3.652 11 O -0.394 6.394 12 C -0.168 4.168 13 C 0.126 3.874 14 O -0.287 6.287 15 C -0.148 4.148 16 C -0.075 4.075 17 C -0.191 4.191 18 O -0.333 6.333 19 Si 0.590 3.410 20 C -0.153 4.153 21 C -0.083 4.083 22 C -0.207 4.207 23 H 0.091 0.909 24 H 0.082 0.918 25 H 0.082 0.918 26 H 0.068 0.932 27 H 0.068 0.932 28 H 0.115 0.885 29 H 0.101 0.899 30 H 0.236 0.764 31 H 0.256 0.744 32 H 0.158 0.842 33 H 0.141 0.859 34 H 0.225 0.775 35 H -0.183 1.183 36 H -0.180 1.180 37 H 0.154 0.846 38 H 0.152 0.848 39 H 0.094 0.906 40 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges -3.875 0.837 -1.825 4.365 hybrid contribution -0.305 -0.654 1.463 1.631 sum -4.181 0.184 -0.362 4.200 Atomic orbital electron populations 1.21760 0.93571 1.02501 1.03193 1.22553 0.95782 0.83617 1.00192 1.87948 1.20034 1.26676 1.94558 1.23385 0.81673 0.97798 0.96407 0.88970 1.23628 0.97477 0.98565 0.98519 1.22210 0.98152 0.82723 0.94865 0.86191 1.45821 1.17168 1.11866 1.61940 1.18081 0.81949 0.87444 0.77776 1.90830 1.43309 1.50476 1.54772 1.20426 0.95423 0.94392 1.06580 1.18511 0.85996 0.88878 0.93991 1.84760 1.48321 1.51925 1.43724 1.21342 1.00395 0.92063 1.00979 1.20392 0.93631 0.96323 0.97175 1.25159 1.13026 0.96703 0.84170 1.86629 1.45309 1.85577 1.15773 0.94907 0.75182 0.78793 0.92149 1.20950 0.97076 0.96616 1.00664 1.21149 0.97871 0.92304 0.97008 1.24024 0.98544 1.00321 0.97842 0.90948 0.91824 0.91773 0.93182 0.93246 0.88488 0.89886 0.76352 0.74371 0.84151 0.85865 0.77527 1.18255 1.17987 0.84638 0.84801 0.90587 0.88770 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.14 10.28 37.16 0.38 0.53 16 2 C 0.06 -0.02 6.50 37.16 0.24 0.22 16 3 O -0.37 -0.43 10.35 -35.23 -0.36 -0.80 16 4 C 0.07 -0.04 4.31 -25.92 -0.11 -0.15 16 5 H 0.09 -0.15 7.87 -51.93 -0.41 -0.56 16 6 C -0.14 0.21 7.66 -25.92 -0.20 0.01 16 7 C 0.13 -0.04 4.24 -67.12 -0.28 -0.33 16 8 H 0.12 0.12 7.46 -51.93 -0.39 -0.27 16 9 N -0.72 0.30 5.31 -54.06 -0.29 0.02 16 10 C 0.56 1.38 7.76 -12.47 -0.10 1.28 16 11 O -0.52 -3.13 14.76 -16.59 -0.24 -3.37 16 12 C -0.16 -0.18 5.89 -104.84 -0.62 -0.79 16 13 C 0.17 0.32 6.72 -38.69 -0.26 0.06 16 14 O -0.48 -1.34 11.58 -40.56 -0.47 -1.81 16 15 C -0.13 -0.07 9.53 -39.48 -0.38 -0.45 16 16 C -0.07 0.06 5.39 -104.58 -0.56 -0.50 16 17 C -0.08 0.11 2.81 36.01 0.10 0.21 16 18 O -0.53 -0.10 12.76 -35.23 -0.45 -0.55 16 19 Si 0.69 -1.50 29.77 -169.99 -5.06 -6.56 16 20 C -0.14 0.26 8.64 -39.63 -0.34 -0.08 16 21 C -0.06 0.11 9.54 -39.20 -0.37 -0.27 16 22 C -0.17 0.07 7.71 -25.92 -0.20 -0.13 16 23 H 0.07 -0.15 8.14 -51.93 -0.42 -0.58 16 24 H 0.06 -0.03 8.14 -51.93 -0.42 -0.45 16 25 H 0.06 -0.04 8.14 -51.93 -0.42 -0.46 16 26 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 27 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 28 H 0.10 -0.17 8.12 -51.93 -0.42 -0.59 16 29 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 30 H 0.40 -1.21 6.76 -40.82 -0.28 -1.48 16 31 H 0.40 -0.33 9.06 45.56 0.41 0.09 16 32 H 0.14 0.05 8.06 -52.49 -0.42 -0.38 16 33 H 0.12 -0.23 7.96 -51.93 -0.41 -0.64 16 34 H 0.38 -1.04 8.70 45.56 0.40 -0.64 16 35 H -0.26 0.13 7.10 56.52 0.40 0.53 16 36 H -0.25 -0.36 7.11 56.52 0.40 0.05 16 37 H 0.14 -0.54 4.85 -52.49 -0.25 -0.80 16 38 H 0.13 -0.61 6.40 -52.49 -0.34 -0.95 16 39 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 40 H 0.09 -0.01 8.14 -51.93 -0.42 -0.43 16 LS Contribution 336.10 15.07 5.06 5.06 Total: 0.00 -8.73 336.10 -9.20 -17.93 By element: Atomic # 1 Polarization: -4.83 SS G_CDS: -4.69 Total: -9.52 kcal Atomic # 6 Polarization: 2.30 SS G_CDS: -2.70 Total: -0.40 kcal Atomic # 7 Polarization: 0.30 SS G_CDS: -0.29 Total: 0.02 kcal Atomic # 8 Polarization: -4.99 SS G_CDS: -1.53 Total: -6.52 kcal Atomic # 14 Polarization: -1.50 SS G_CDS: -5.06 Total: -6.56 kcal Total LS contribution 5.06 Total: 5.06 kcal Total: -8.73 -9.20 -17.93 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10905468_13422076.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -78.714 kcal (2) G-P(sol) polarization free energy of solvation -8.728 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -87.442 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.202 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.930 kcal (6) G-S(sol) free energy of system = (1) + (5) -96.644 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds