Wall clock time and date at job start Sat Mar 6 2021 13:18:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53008 * 1 3 3 O 1.42899 * 109.47249 * 2 1 4 4 C 1.42895 * 114.00145 * 179.97438 * 3 2 1 5 5 H 1.08999 * 112.84977 * 18.79734 * 4 3 2 6 6 C 1.53786 * 113.61544 * 149.99935 * 4 3 2 7 7 C 1.53781 * 87.07981 * 140.06476 * 6 4 3 8 8 H 1.08997 * 113.61482 * 89.20366 * 7 6 4 9 9 N 1.46505 * 113.61254 * 220.01741 * 7 6 4 10 10 C 1.34776 * 120.00194 * 204.99696 * 9 7 6 11 11 O 1.21286 * 119.99912 * 0.02562 * 10 9 7 12 12 C 1.50694 * 119.99907 * 180.02562 * 10 9 7 13 13 C 1.52998 * 109.47317 * 299.99942 * 12 10 9 14 14 O 1.42909 * 109.46951 * 180.02562 * 12 10 9 15 15 C 1.36019 * 116.99990 * 209.99874 * 14 12 10 16 16 C 1.38623 * 120.07955 * 269.97869 * 15 14 12 17 17 Cl 1.73602 * 120.00804 * 0.02562 * 16 15 14 18 18 C 1.38378 * 119.97965 * 179.78907 * 16 15 14 19 19 C 1.38209 * 120.12953 * 0.49098 * 18 16 15 20 20 C 1.50703 * 119.92051 * 179.76593 * 19 18 16 21 21 O 1.42896 * 109.47055 * 119.72171 * 20 19 18 22 22 Si 1.86304 * 109.46911 * 359.72063 * 20 19 18 23 23 C 1.38278 * 120.15800 * 359.48492 * 19 18 16 24 24 C 1.38561 * 120.01542 * 0.27978 * 23 19 18 25 25 O 1.35990 * 120.06035 * 180.02562 * 24 23 19 26 26 C 1.42894 * 117.00679 * 0.02562 * 25 24 23 27 27 C 1.53779 * 87.08223 * 334.56366 * 7 6 4 28 28 H 1.08994 * 109.46951 * 180.02562 * 1 2 3 29 29 H 1.08998 * 109.46574 * 300.00352 * 1 2 3 30 30 H 1.08996 * 109.46631 * 60.00175 * 1 2 3 31 31 H 1.08992 * 109.47232 * 239.99719 * 2 1 3 32 32 H 1.09005 * 109.46866 * 119.99810 * 2 1 3 33 33 H 1.09003 * 113.61320 * 25.51481 * 6 4 3 34 34 H 1.08997 * 113.61077 * 254.61165 * 6 4 3 35 35 H 0.97002 * 119.99493 * 25.00550 * 9 7 6 36 36 H 1.08996 * 109.47305 * 60.00902 * 12 10 9 37 37 H 1.09003 * 109.46693 * 60.00649 * 13 12 10 38 38 H 1.09001 * 109.47322 * 180.02562 * 13 12 10 39 39 H 1.08996 * 109.47717 * 300.00709 * 13 12 10 40 40 H 1.07994 * 119.93187 * 180.24948 * 18 16 15 41 41 H 1.09002 * 109.47152 * 239.71979 * 20 19 18 42 42 H 0.96703 * 114.00193 * 180.02562 * 21 20 19 43 43 H 1.48501 * 109.99997 * 298.67752 * 22 20 19 44 44 H 1.48495 * 110.00011 * 60.00027 * 22 20 19 45 45 H 1.07997 * 119.99107 * 180.25598 * 23 19 18 46 46 H 1.08996 * 109.47809 * 180.02562 * 26 25 24 47 47 H 1.09002 * 109.46999 * 300.00379 * 26 25 24 48 48 H 1.08998 * 109.47354 * 59.99776 * 26 25 24 49 49 H 1.09009 * 113.61131 * 139.97846 * 27 7 6 50 50 H 1.08990 * 113.62139 * 270.88278 * 27 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 8 2.0064 1.3473 0.0000 4 6 3.4309 1.4601 0.0006 5 1 3.9281 0.5455 -0.3227 6 6 3.9490 2.7251 -0.7039 7 6 4.9911 2.8302 0.4220 8 1 5.9154 2.2915 0.2132 9 7 5.2235 4.2021 0.8804 10 6 6.3970 4.5306 1.4562 11 8 7.2608 3.6906 1.5944 12 6 6.6357 5.9417 1.9281 13 6 6.5242 6.9019 0.7422 14 8 7.9428 6.0387 2.4978 15 6 8.1184 6.9543 3.4882 16 6 8.5031 8.2492 3.1770 17 17 8.7609 8.7044 1.5217 18 6 8.6769 9.1803 4.1859 19 6 8.4775 8.8192 5.5050 20 6 8.6732 9.8355 6.6004 21 8 7.4487 10.0051 7.3172 22 14 9.1858 11.4632 5.8529 23 6 8.0931 7.5292 5.8217 24 6 7.9126 6.5932 4.8161 25 8 7.5341 5.3244 5.1264 26 6 7.3395 5.0254 6.5101 27 6 4.0038 2.0456 1.3021 28 1 -0.3633 -1.0276 0.0005 29 1 -0.3632 0.5139 0.8900 30 1 -0.3632 0.5138 -0.8900 31 1 1.8934 -0.5138 -0.8899 32 1 1.8934 -0.5138 0.8901 33 1 3.2310 3.5452 -0.7124 34 1 4.3837 2.5316 -1.6846 35 1 4.5327 4.8740 0.7696 36 1 5.8912 6.2043 2.6796 37 1 5.5274 6.8281 0.3075 38 1 6.6974 7.9226 1.0836 39 1 7.2687 6.6393 -0.0093 40 1 8.9728 10.1899 3.9424 41 1 9.4489 9.4889 7.2833 42 1 7.5008 10.6469 8.0386 43 1 10.4745 11.3074 5.1315 44 1 8.1366 11.9465 4.9199 45 1 7.9340 7.2511 6.8530 46 1 7.0408 3.9827 6.6181 47 1 8.2697 5.1945 7.0526 48 1 6.5602 5.6708 6.9152 49 1 4.4829 1.3035 1.9409 50 1 3.3009 2.6799 1.8421 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10905468_13428712.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:18:47 Heat of formation + Delta-G solvation = -125.403021 kcal Electronic energy + Delta-G solvation = -34119.970593 eV Core-core repulsion = 29335.418673 eV Total energy + Delta-G solvation = -4784.551920 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.142 amu Computer time = 1.37 seconds Orbital eigenvalues (eV) -42.11388 -41.37156 -40.20960 -39.37260 -38.96643 -37.92385 -37.50611 -37.03603 -34.77140 -33.04422 -31.84183 -31.56653 -31.38823 -28.65396 -26.94181 -26.81483 -26.14772 -24.53483 -23.84492 -23.68903 -22.75008 -21.72311 -21.07287 -19.70530 -18.70426 -18.65323 -18.50114 -18.28587 -18.07523 -17.21772 -16.85209 -16.74817 -16.62058 -16.57647 -16.36786 -15.92857 -15.77490 -15.69468 -15.20259 -14.88703 -14.64307 -14.48083 -14.34832 -14.28808 -14.07454 -13.96671 -13.85448 -13.53586 -13.45898 -13.29210 -12.97631 -12.83768 -12.80248 -12.71583 -12.50902 -12.41683 -12.17851 -12.14940 -12.10445 -11.96663 -11.80710 -11.73318 -11.48602 -10.82905 -10.45629 -10.40724 -10.18472 -9.94543 -9.56846 -4.97339 -0.47796 -0.20663 0.65604 1.24153 1.35975 1.51858 1.64150 1.94955 2.02593 2.09963 2.52545 2.80924 3.16726 3.36895 3.47662 3.50900 3.52948 3.60628 3.67704 3.70016 3.74805 3.83202 3.84270 3.92537 4.00989 4.16196 4.17153 4.21787 4.26264 4.36510 4.38664 4.47336 4.47428 4.55228 4.57502 4.62339 4.65070 4.66256 4.68362 4.79588 4.89573 4.92977 4.94507 4.98509 5.01583 5.02961 5.08486 5.24866 5.39364 5.79787 6.20131 6.26574 6.38767 6.88167 7.04753 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.152 4.152 2 C 0.049 3.951 3 O -0.390 6.390 4 C 0.065 3.935 5 H 0.102 0.898 6 C -0.131 4.131 7 C 0.122 3.878 8 H 0.104 0.896 9 N -0.699 5.699 10 C 0.521 3.479 11 O -0.562 6.562 12 C 0.074 3.926 13 C -0.176 4.176 14 O -0.307 6.307 15 C 0.053 3.947 16 C -0.017 4.017 17 Cl -0.038 7.038 18 C -0.154 4.154 19 C -0.030 4.030 20 C -0.074 4.074 21 O -0.558 6.558 22 Si 0.767 3.233 23 C -0.159 4.159 24 C 0.124 3.876 25 O -0.320 6.320 26 C 0.013 3.987 27 C -0.166 4.166 28 H 0.085 0.915 29 H 0.057 0.943 30 H 0.059 0.941 31 H 0.058 0.942 32 H 0.053 0.947 33 H 0.105 0.895 34 H 0.091 0.909 35 H 0.417 0.583 36 H 0.102 0.898 37 H 0.104 0.896 38 H 0.078 0.922 39 H 0.063 0.937 40 H 0.137 0.863 41 H 0.110 0.890 42 H 0.408 0.592 43 H -0.287 1.287 44 H -0.292 1.292 45 H 0.169 0.831 46 H 0.115 0.885 47 H 0.073 0.927 48 H 0.074 0.926 49 H 0.069 0.931 50 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.020 3.372 5.444 7.561 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.209 4.209 2 C -0.027 4.027 3 O -0.310 6.310 4 C 0.006 3.994 5 H 0.120 0.880 6 C -0.169 4.169 7 C 0.017 3.983 8 H 0.122 0.878 9 N -0.352 5.352 10 C 0.307 3.693 11 O -0.440 6.440 12 C 0.015 3.985 13 C -0.233 4.233 14 O -0.222 6.222 15 C 0.007 3.993 16 C -0.044 4.044 17 Cl -0.008 7.008 18 C -0.173 4.173 19 C -0.031 4.031 20 C -0.184 4.184 21 O -0.369 6.369 22 Si 0.673 3.327 23 C -0.178 4.178 24 C 0.076 3.924 25 O -0.233 6.233 26 C -0.080 4.080 27 C -0.205 4.205 28 H 0.104 0.896 29 H 0.076 0.924 30 H 0.078 0.922 31 H 0.077 0.923 32 H 0.071 0.929 33 H 0.123 0.877 34 H 0.110 0.890 35 H 0.255 0.745 36 H 0.120 0.880 37 H 0.122 0.878 38 H 0.097 0.903 39 H 0.082 0.918 40 H 0.154 0.846 41 H 0.127 0.873 42 H 0.260 0.740 43 H -0.215 1.215 44 H -0.219 1.219 45 H 0.186 0.814 46 H 0.134 0.866 47 H 0.091 0.909 48 H 0.093 0.907 49 H 0.087 0.913 50 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges -3.431 2.661 4.050 5.937 hybrid contribution -0.073 -0.454 -0.170 0.490 sum -3.504 2.206 3.880 5.675 Atomic orbital electron populations 1.21772 0.93267 1.03222 1.02659 1.22686 0.96110 0.83138 1.00790 1.87919 1.20742 1.27662 1.94638 1.23466 0.81205 0.98577 0.96143 0.88009 1.23565 0.96714 0.98393 0.98217 1.22193 0.97809 0.82425 0.95842 0.87826 1.45693 1.16307 1.12455 1.60773 1.20500 0.82197 0.89412 0.77181 1.90724 1.45288 1.52000 1.55974 1.22334 0.85332 0.93154 0.97636 1.22578 1.04606 0.99464 0.96682 1.86239 1.29709 1.56094 1.50205 1.17747 1.07369 0.88180 0.86001 1.20922 1.03535 0.92628 0.87323 1.98380 1.94330 1.92056 1.16060 1.20741 1.05917 0.98924 0.91713 1.19492 0.96188 0.94590 0.92807 1.24731 0.91626 1.05575 0.96476 1.86421 1.31428 1.67577 1.51445 0.94402 0.76194 0.79097 0.83055 1.21346 1.03939 0.92301 1.00226 1.19370 0.95052 0.85528 0.92417 1.86226 1.82088 1.24741 1.30240 1.23487 1.02626 1.03952 0.77975 1.23985 0.98308 1.00161 0.98013 0.89621 0.92425 0.92188 0.92336 0.92891 0.87709 0.89003 0.74501 0.88000 0.87792 0.90311 0.91771 0.84616 0.87268 0.73970 1.21461 1.21925 0.81395 0.86647 0.90884 0.90707 0.91271 0.88871 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.20 10.28 71.98 0.74 0.94 16 2 C 0.05 -0.01 6.50 71.98 0.47 0.46 16 3 O -0.39 -1.23 10.36 -148.98 -1.54 -2.77 16 4 C 0.06 0.00 4.31 31.12 0.13 0.13 16 5 H 0.10 -0.23 7.87 -2.39 -0.02 -0.25 16 6 C -0.13 0.27 7.66 31.12 0.24 0.50 16 7 C 0.12 0.20 4.24 45.52 0.19 0.39 16 8 H 0.10 0.56 7.46 -2.39 -0.02 0.54 16 9 N -0.70 -1.02 5.25 -440.03 -2.31 -3.33 16 10 C 0.52 4.78 7.23 87.66 0.63 5.41 16 11 O -0.56 -10.78 16.10 15.99 0.26 -10.52 16 12 C 0.07 0.49 3.20 29.85 0.10 0.58 16 13 C -0.18 -0.30 8.29 71.98 0.60 0.29 16 14 O -0.31 -4.08 8.55 -67.36 -0.58 -4.66 16 15 C 0.05 0.56 5.56 22.58 0.13 0.68 16 16 C -0.02 -0.14 6.24 22.40 0.14 -0.01 16 17 Cl -0.04 -0.28 24.90 -2.72 -0.07 -0.35 16 18 C -0.15 -0.98 8.45 22.30 0.19 -0.79 16 19 C -0.03 -0.10 5.42 -19.86 -0.11 -0.21 16 20 C -0.07 0.26 2.81 71.24 0.20 0.46 16 21 O -0.56 2.47 12.74 -148.98 -1.90 0.58 16 22 Si 0.77 -2.77 29.78 68.60 2.04 -0.72 16 23 C -0.16 -0.53 8.60 22.36 0.19 -0.33 16 24 C 0.12 0.99 6.70 22.56 0.15 1.14 16 25 O -0.32 -2.65 10.28 -79.57 -0.82 -3.47 16 26 C 0.01 -0.02 9.81 113.37 1.11 1.10 16 27 C -0.17 -0.22 7.71 31.12 0.24 0.02 16 28 H 0.09 -0.36 8.14 -2.39 -0.02 -0.38 16 29 H 0.06 -0.01 8.14 -2.39 -0.02 -0.03 16 30 H 0.06 -0.03 8.14 -2.39 -0.02 -0.05 16 31 H 0.06 -0.12 8.14 -2.39 -0.02 -0.14 16 32 H 0.05 -0.06 8.14 -2.38 -0.02 -0.08 16 33 H 0.10 -0.34 8.12 -2.39 -0.02 -0.36 16 34 H 0.09 -0.32 8.14 -2.39 -0.02 -0.33 16 35 H 0.42 -2.02 8.14 -92.71 -0.76 -2.78 16 36 H 0.10 0.34 7.91 -2.39 -0.02 0.32 16 37 H 0.10 -0.51 7.56 -2.39 -0.02 -0.53 16 38 H 0.08 0.19 5.45 -2.39 -0.01 0.18 16 39 H 0.06 0.28 8.14 -2.39 -0.02 0.26 16 40 H 0.14 0.72 4.86 -2.91 -0.01 0.71 16 41 H 0.11 -0.93 7.96 -2.39 -0.02 -0.95 16 42 H 0.41 -6.08 8.74 -74.05 -0.65 -6.72 16 43 H -0.29 -0.72 7.11 99.48 0.71 -0.01 16 44 H -0.29 -1.14 7.11 99.48 0.71 -0.43 16 45 H 0.17 -0.30 6.30 -2.91 -0.02 -0.32 16 46 H 0.12 -0.41 8.14 -2.39 -0.02 -0.43 16 47 H 0.07 -0.29 7.66 -2.39 -0.02 -0.31 16 48 H 0.07 -0.33 7.66 -2.39 -0.02 -0.35 16 49 H 0.07 0.19 8.14 -2.38 -0.02 0.17 16 50 H 0.09 0.15 8.14 -2.39 -0.02 0.13 16 Total: 0.00 -26.65 422.30 0.05 -26.59 By element: Atomic # 1 Polarization: -11.75 SS G_CDS: -0.38 Total: -12.13 kcal Atomic # 6 Polarization: 5.45 SS G_CDS: 5.34 Total: 10.79 kcal Atomic # 7 Polarization: -1.02 SS G_CDS: -2.31 Total: -3.33 kcal Atomic # 8 Polarization: -16.27 SS G_CDS: -4.58 Total: -20.84 kcal Atomic # 14 Polarization: -2.77 SS G_CDS: 2.04 Total: -0.72 kcal Atomic # 17 Polarization: -0.28 SS G_CDS: -0.07 Total: -0.35 kcal Total: -26.65 0.05 -26.59 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10905468_13428712.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -98.811 kcal (2) G-P(sol) polarization free energy of solvation -26.646 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -125.457 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.054 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.592 kcal (6) G-S(sol) free energy of system = (1) + (5) -125.403 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.37 seconds