Wall clock time and date at job start Sat Mar 6 2021 13:18:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 O 1.42895 * 109.47503 * 2 1 4 4 C 1.42902 * 114.00370 * 179.97438 * 3 2 1 5 5 H 1.08998 * 112.84868 * 20.33578 * 4 3 2 6 6 C 1.53784 * 113.61274 * 151.52601 * 4 3 2 7 7 C 1.53781 * 87.07888 * 139.98357 * 6 4 3 8 8 H 1.09004 * 113.61784 * 89.20017 * 7 6 4 9 9 N 1.46499 * 113.61308 * 220.02005 * 7 6 4 10 10 C 1.34786 * 119.99559 * 205.00073 * 9 7 6 11 11 O 1.21604 * 120.00475 * 359.97438 * 10 9 7 12 12 C 1.47383 * 119.99552 * 180.02562 * 10 9 7 13 13 C 1.36416 * 127.19169 * 0.02562 * 12 10 9 14 14 O 1.33657 * 108.39468 * 180.02562 * 13 12 10 15 15 C 1.34211 * 110.90578 * 359.97438 * 14 13 12 16 16 C 1.50707 * 125.43642 * 179.97438 * 15 14 13 17 17 O 1.42892 * 109.47245 * 244.97721 * 16 15 14 18 18 Si 1.86305 * 109.46724 * 4.97406 * 16 15 14 19 19 C 1.34175 * 109.12772 * 359.70527 * 15 14 13 20 20 C 1.53772 * 113.61422 * 249.13361 * 4 3 2 21 21 H 1.09002 * 109.47153 * 60.00043 * 1 2 3 22 22 H 1.09001 * 109.46832 * 300.00234 * 1 2 3 23 23 H 1.09004 * 109.47261 * 180.02562 * 1 2 3 24 24 H 1.09002 * 109.47153 * 119.99957 * 2 1 3 25 25 H 1.08998 * 109.47533 * 239.99586 * 2 1 3 26 26 H 1.08999 * 113.61315 * 254.52789 * 6 4 3 27 27 H 1.08995 * 113.61461 * 25.35038 * 6 4 3 28 28 H 0.96989 * 120.00163 * 24.99861 * 9 7 6 29 29 H 1.08000 * 125.80550 * 359.97438 * 13 12 10 30 30 H 1.09001 * 109.47152 * 124.96821 * 16 15 14 31 31 H 0.96699 * 113.99884 * 179.97438 * 17 16 15 32 32 H 1.48494 * 109.99979 * 300.00040 * 18 16 15 33 33 H 1.48499 * 110.00034 * 61.31909 * 18 16 15 34 34 H 1.07999 * 127.02306 * 180.26444 * 19 15 14 35 35 H 1.08996 * 113.61897 * 334.56701 * 20 4 3 36 36 H 1.09003 * 113.61526 * 105.47184 * 20 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0064 1.3472 0.0000 4 6 3.4309 1.4600 0.0006 5 1 3.9274 0.5545 -0.3481 6 6 3.9475 2.7433 -0.6712 7 6 4.9906 2.8197 0.4562 8 1 5.9151 2.2872 0.2326 9 7 5.2225 4.1793 0.9500 10 6 6.3964 4.4934 1.5330 11 8 7.2629 3.6482 1.6495 12 6 6.6295 5.8611 2.0303 13 6 5.7660 6.9159 1.9780 14 8 6.3602 7.9754 2.5354 15 6 7.5945 7.6638 2.9603 16 6 8.5513 8.6120 3.6361 17 8 9.6939 8.8110 2.8015 18 14 7.7040 10.2452 3.9289 19 6 7.8386 6.3719 2.6926 20 6 4.0048 2.0092 1.3173 21 1 -0.3633 0.5138 -0.8900 22 1 -0.3633 0.5139 0.8900 23 1 -0.3634 -1.0277 0.0005 24 1 1.8933 -0.5138 0.8900 25 1 1.8934 -0.5139 -0.8899 26 1 4.3815 2.5758 -1.6569 27 1 3.2285 3.5624 -0.6588 28 1 4.5313 4.8534 0.8574 29 1 4.7716 6.8981 1.5568 30 1 8.8673 8.1904 4.5904 31 1 10.3533 9.4121 3.1743 32 1 7.2683 10.8303 2.6355 33 1 6.5323 10.0567 4.8215 34 1 8.7403 5.8208 2.9149 35 1 3.3021 2.6277 1.8756 36 1 4.4850 1.2499 1.9346 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10905468_13456056.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:18:53 Heat of formation + Delta-G solvation = -68.039481 kcal Electronic energy + Delta-G solvation = -19849.300622 eV Core-core repulsion = 16496.094772 eV Total energy + Delta-G solvation = -3353.205850 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 268.119 amu Computer time = 0.51 seconds Orbital eigenvalues (eV) -43.87868 -41.24726 -39.81553 -37.90323 -37.55134 -34.76352 -33.85060 -32.07574 -31.61976 -26.93182 -26.82797 -26.04199 -24.11333 -23.60369 -22.38054 -21.38591 -20.70320 -18.99560 -18.68351 -18.33632 -17.52646 -17.25683 -16.85506 -16.57403 -16.45672 -15.92689 -15.79059 -15.74497 -15.02705 -14.53597 -14.30733 -14.21780 -14.03120 -13.80529 -13.54816 -13.46520 -12.85359 -12.73440 -12.52643 -12.18267 -12.17250 -12.00369 -11.81601 -11.30104 -11.09446 -10.49887 -10.46631 -10.22859 -9.89634 -5.04031 0.09778 0.69000 1.17546 1.51220 1.68627 1.89507 2.01465 2.10831 2.77060 3.26139 3.36390 3.41173 3.48060 3.68894 3.74630 3.80540 3.84244 4.15272 4.17182 4.24563 4.33684 4.37788 4.40439 4.46863 4.64572 4.67061 4.74619 4.78957 4.89104 4.91948 4.97833 5.01078 5.02301 5.24065 5.38124 5.69525 6.25394 6.35816 6.82161 7.01706 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.152 4.152 2 C 0.049 3.951 3 O -0.391 6.391 4 C 0.064 3.936 5 H 0.102 0.898 6 C -0.131 4.131 7 C 0.121 3.879 8 H 0.105 0.895 9 N -0.698 5.698 10 C 0.590 3.410 11 O -0.580 6.580 12 C -0.264 4.264 13 C 0.056 3.944 14 O -0.185 6.185 15 C -0.029 4.029 16 C -0.048 4.048 17 O -0.564 6.564 18 Si 0.818 3.182 19 C -0.143 4.143 20 C -0.167 4.167 21 H 0.059 0.941 22 H 0.057 0.943 23 H 0.085 0.915 24 H 0.053 0.947 25 H 0.059 0.941 26 H 0.092 0.908 27 H 0.105 0.895 28 H 0.416 0.584 29 H 0.261 0.739 30 H 0.120 0.880 31 H 0.413 0.587 32 H -0.302 1.302 33 H -0.289 1.289 34 H 0.155 0.845 35 H 0.093 0.907 36 H 0.069 0.931 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.948 3.055 1.236 3.828 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.209 4.209 2 C -0.027 4.027 3 O -0.310 6.310 4 C 0.006 3.994 5 H 0.120 0.880 6 C -0.169 4.169 7 C 0.016 3.984 8 H 0.123 0.877 9 N -0.349 5.349 10 C 0.379 3.621 11 O -0.461 6.461 12 C -0.268 4.268 13 C -0.014 4.014 14 O -0.082 6.082 15 C -0.076 4.076 16 C -0.157 4.157 17 O -0.375 6.375 18 Si 0.723 3.277 19 C -0.163 4.163 20 C -0.206 4.206 21 H 0.078 0.922 22 H 0.076 0.924 23 H 0.104 0.896 24 H 0.071 0.929 25 H 0.077 0.923 26 H 0.110 0.890 27 H 0.124 0.876 28 H 0.254 0.746 29 H 0.277 0.723 30 H 0.137 0.863 31 H 0.267 0.733 32 H -0.229 1.229 33 H -0.217 1.217 34 H 0.172 0.828 35 H 0.112 0.888 36 H 0.088 0.912 Dipole moment (debyes) X Y Z Total from point charges -2.610 2.941 0.891 4.032 hybrid contribution -0.050 -0.975 -0.198 0.996 sum -2.659 1.967 0.693 3.379 Atomic orbital electron populations 1.21774 0.93293 1.03218 1.02662 1.22678 0.96086 0.83143 1.00802 1.87916 1.20769 1.27657 1.94654 1.23471 0.81195 0.98624 0.96125 0.87996 1.23553 0.96699 0.98293 0.98318 1.22251 0.97943 0.82601 0.95560 0.87657 1.45605 1.16156 1.13338 1.59823 1.17441 0.82003 0.86003 0.76660 1.90775 1.45637 1.51120 1.58601 1.21538 0.97803 0.95350 1.12147 1.25321 0.99316 0.82498 0.94256 1.83737 1.26436 1.38324 1.59674 1.21743 0.85473 0.95265 1.05162 1.24163 0.89456 1.07687 0.94355 1.86419 1.31993 1.71691 1.47445 0.93995 0.79890 0.75824 0.78028 1.22616 0.98783 0.93910 1.01018 1.24030 0.98334 1.00165 0.98046 0.92169 0.92430 0.89648 0.92904 0.92315 0.88979 0.87642 0.74643 0.72331 0.86255 0.73321 1.22936 1.21657 0.82750 0.88830 0.91197 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.24 10.28 71.98 0.74 0.98 16 2 C 0.05 -0.03 6.50 71.98 0.47 0.44 16 3 O -0.39 -1.03 10.35 -148.98 -1.54 -2.58 16 4 C 0.06 -0.04 4.29 31.12 0.13 0.09 16 5 H 0.10 -0.29 7.88 -2.39 -0.02 -0.31 16 6 C -0.13 0.37 7.66 31.12 0.24 0.60 16 7 C 0.12 0.10 4.24 45.58 0.19 0.29 16 8 H 0.11 0.47 7.46 -2.38 -0.02 0.45 16 9 N -0.70 -0.39 5.35 -443.05 -2.37 -2.76 16 10 C 0.59 5.06 7.81 86.65 0.68 5.74 16 11 O -0.58 -10.24 16.58 -4.04 -0.07 -10.31 16 12 C -0.26 -1.70 6.31 -18.99 -0.12 -1.82 16 13 C 0.06 0.00 11.61 67.39 0.78 0.78 16 14 O -0.19 -0.94 8.90 4.46 0.04 -0.90 16 15 C -0.03 -0.18 6.22 24.76 0.15 -0.02 16 16 C -0.05 0.04 2.97 71.24 0.21 0.25 16 17 O -0.56 0.31 12.86 -148.98 -1.92 -1.60 16 18 Si 0.82 -2.48 32.09 68.60 2.20 -0.28 16 19 C -0.14 -1.27 10.90 23.65 0.26 -1.01 16 20 C -0.17 -0.09 7.73 31.18 0.24 0.15 16 21 H 0.06 -0.05 8.14 -2.39 -0.02 -0.07 16 22 H 0.06 -0.02 8.14 -2.39 -0.02 -0.04 16 23 H 0.08 -0.37 8.14 -2.38 -0.02 -0.39 16 24 H 0.05 -0.07 8.14 -2.39 -0.02 -0.09 16 25 H 0.06 -0.14 8.14 -2.39 -0.02 -0.16 16 26 H 0.09 -0.38 8.14 -2.39 -0.02 -0.40 16 27 H 0.11 -0.45 8.12 -2.39 -0.02 -0.47 16 28 H 0.42 -2.73 7.70 -92.72 -0.71 -3.44 16 29 H 0.26 -2.97 7.47 -2.91 -0.02 -2.99 16 30 H 0.12 -0.73 7.96 -2.39 -0.02 -0.74 16 31 H 0.41 -5.12 8.74 -74.06 -0.65 -5.77 16 32 H -0.30 -1.69 7.11 99.48 0.71 -0.98 16 33 H -0.29 -0.83 7.11 99.48 0.71 -0.12 16 34 H 0.15 1.48 8.06 -2.91 -0.02 1.46 16 35 H 0.09 0.07 8.14 -2.39 -0.02 0.06 16 36 H 0.07 0.14 8.14 -2.39 -0.02 0.12 16 Total: 0.00 -25.95 315.41 0.10 -25.85 By element: Atomic # 1 Polarization: -13.67 SS G_CDS: -0.22 Total: -13.90 kcal Atomic # 6 Polarization: 2.50 SS G_CDS: 3.98 Total: 6.48 kcal Atomic # 7 Polarization: -0.39 SS G_CDS: -2.37 Total: -2.76 kcal Atomic # 8 Polarization: -11.90 SS G_CDS: -3.48 Total: -15.39 kcal Atomic # 14 Polarization: -2.48 SS G_CDS: 2.20 Total: -0.28 kcal Total: -25.95 0.10 -25.85 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10905468_13456056.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -42.194 kcal (2) G-P(sol) polarization free energy of solvation -25.946 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -68.140 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.100 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.846 kcal (6) G-S(sol) free energy of system = (1) + (5) -68.039 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds