Wall clock time and date at job start Sat Mar 6 2021 13:18:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 O 1.42899 * 109.46889 * 2 1 4 4 C 1.42905 * 113.99778 * 179.97438 * 3 2 1 5 5 H 1.08993 * 112.85051 * 341.19650 * 4 3 2 6 6 C 1.53777 * 113.60992 * 112.50394 * 4 3 2 7 7 C 1.53788 * 87.07917 * 139.97944 * 6 4 3 8 8 H 1.09001 * 113.68888 * 89.12675 * 7 6 4 9 9 N 1.46500 * 113.61319 * 220.01488 * 7 6 4 10 10 C 1.34773 * 120.00042 * 252.49385 * 9 7 6 11 11 O 1.21697 * 120.00390 * 0.02562 * 10 9 7 12 12 C 1.46684 * 120.00082 * 180.02562 * 10 9 7 13 13 C 1.37870 * 126.23444 * 179.72225 * 12 10 9 14 14 C 1.50701 * 126.45745 * 359.95951 * 13 12 10 15 15 C 1.39836 * 107.08508 * 179.84659 * 13 12 10 16 16 C 1.35453 * 107.86424 * 0.41551 * 15 13 12 17 17 C 1.50695 * 125.56520 * 179.78255 * 16 15 13 18 18 O 1.42908 * 109.46863 * 244.95409 * 17 16 15 19 19 Si 1.86300 * 109.46999 * 4.95098 * 17 16 15 20 20 N 1.35531 * 108.87125 * 359.73970 * 16 15 13 21 21 C 1.53780 * 87.07984 * 334.56628 * 7 6 4 22 22 H 1.09008 * 109.47201 * 60.00236 * 1 2 3 23 23 H 1.09001 * 109.47296 * 179.97438 * 1 2 3 24 24 H 1.08997 * 109.47286 * 300.00017 * 1 2 3 25 25 H 1.08997 * 109.47286 * 239.99983 * 2 1 3 26 26 H 1.08997 * 109.46848 * 120.00081 * 2 1 3 27 27 H 1.08999 * 113.61768 * 254.52357 * 6 4 3 28 28 H 1.08999 * 113.61941 * 25.43867 * 6 4 3 29 29 H 0.97000 * 119.99989 * 72.50257 * 9 7 6 30 30 H 1.09001 * 109.47230 * 90.00023 * 14 13 12 31 31 H 1.08996 * 109.47145 * 210.00297 * 14 13 12 32 32 H 1.09002 * 109.47143 * 330.00077 * 14 13 12 33 33 H 1.07995 * 126.07187 * 180.13384 * 15 13 12 34 34 H 1.08995 * 109.47732 * 124.95430 * 17 16 15 35 35 H 0.96703 * 113.99509 * 60.00247 * 18 17 16 36 36 H 1.48506 * 109.99942 * 180.02562 * 19 17 16 37 37 H 1.48495 * 110.00126 * 301.32259 * 19 17 16 38 38 H 0.97001 * 125.67938 * 179.97438 * 20 16 15 39 39 H 1.08999 * 113.61549 * 270.88147 * 21 7 6 40 40 H 1.08995 * 113.61171 * 139.97981 * 21 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3473 0.0000 4 6 3.4309 1.4601 0.0006 5 1 3.9277 0.5458 0.3247 6 6 4.0028 2.0462 -1.3010 7 6 4.9899 2.8314 -0.4211 8 1 5.9146 2.2933 -0.2128 9 7 5.2211 4.2035 -0.8794 10 6 6.3942 4.5330 -1.4554 11 8 7.2612 3.6906 -1.5952 12 6 6.6259 5.9070 -1.9137 13 6 7.7730 6.3841 -2.5117 14 6 9.0199 5.5939 -2.8150 15 6 7.5603 7.7386 -2.7860 16 6 6.3182 8.0605 -2.3520 17 6 5.6827 9.4236 -2.4463 18 8 5.4681 9.9411 -1.1315 19 14 6.8090 10.5700 -3.3886 20 7 5.7400 6.9563 -1.8199 21 6 3.9482 2.7253 0.7052 22 1 -0.3634 0.5138 -0.8901 23 1 -0.3634 -1.0277 -0.0005 24 1 -0.3634 0.5138 0.8899 25 1 1.8933 -0.5138 -0.8899 26 1 1.8933 -0.5138 0.8900 27 1 4.4822 1.3047 -1.9401 28 1 3.2993 2.6802 -1.8406 29 1 4.5299 4.8750 -0.7682 30 1 8.9410 5.1588 -3.8113 31 1 9.8868 6.2533 -2.7740 32 1 9.1337 4.7980 -2.0789 33 1 8.2634 8.4102 -3.2560 34 1 4.7278 9.3443 -2.9658 35 1 6.2769 10.0387 -0.6105 36 1 6.1938 11.9181 -3.4881 37 1 8.1254 10.6620 -2.7076 38 1 4.8501 6.9127 -1.4364 39 1 3.2297 3.5449 0.7140 40 1 4.3835 2.5320 1.6855 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10905468_13940406.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:18:56 Heat of formation + Delta-G solvation = -47.739225 kcal Electronic energy + Delta-G solvation = -21872.745016 eV Core-core repulsion = 18462.600495 eV Total energy + Delta-G solvation = -3410.144521 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 281.146 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -42.59016 -41.03095 -39.57563 -37.92972 -37.49445 -34.59264 -33.35652 -31.95544 -31.45859 -28.16659 -27.23533 -26.87243 -25.05859 -23.77787 -22.44327 -21.63253 -21.28201 -20.24027 -19.46419 -18.35757 -18.15879 -16.82035 -16.80815 -16.63659 -16.51468 -16.10495 -15.83229 -15.41541 -15.08683 -14.73632 -14.66685 -14.26005 -13.97428 -13.83002 -13.59551 -13.56802 -13.55009 -13.46954 -12.93802 -12.82143 -12.55764 -12.23606 -12.18664 -12.01977 -11.86963 -11.84765 -11.06829 -10.80025 -10.47963 -10.15721 -9.81931 -9.16336 -4.98264 0.36625 1.10670 1.54736 1.58954 1.82462 1.97155 2.15500 2.35310 2.74243 3.19583 3.33795 3.44868 3.51506 3.71198 3.74968 3.84053 4.08919 4.15403 4.17005 4.19744 4.31320 4.38959 4.39444 4.58909 4.61588 4.70680 4.74975 4.83364 4.84969 4.90218 4.93595 4.97413 5.03998 5.17211 5.22475 5.35359 5.46654 5.66088 5.91230 6.20375 6.22152 6.25681 6.44358 7.13944 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C 0.055 3.945 3 O -0.374 6.374 4 C 0.067 3.933 5 H 0.093 0.907 6 C -0.168 4.168 7 C 0.127 3.873 8 H 0.122 0.878 9 N -0.720 5.720 10 C 0.592 3.408 11 O -0.522 6.522 12 C -0.056 4.056 13 C -0.063 4.063 14 C -0.093 4.093 15 C -0.200 4.200 16 C 0.028 3.972 17 C -0.062 4.062 18 O -0.534 6.534 19 Si 0.718 3.282 20 N -0.524 5.524 21 C -0.145 4.145 22 H 0.063 0.937 23 H 0.072 0.928 24 H 0.063 0.937 25 H 0.050 0.950 26 H 0.050 0.950 27 H 0.077 0.923 28 H 0.093 0.907 29 H 0.395 0.605 30 H 0.071 0.929 31 H 0.064 0.936 32 H 0.080 0.920 33 H 0.150 0.850 34 H 0.119 0.881 35 H 0.380 0.620 36 H -0.255 1.255 37 H -0.255 1.255 38 H 0.416 0.584 39 H 0.095 0.905 40 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.739 -0.102 -0.751 1.897 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.210 4.210 2 C -0.021 4.021 3 O -0.293 6.293 4 C 0.008 3.992 5 H 0.111 0.889 6 C -0.207 4.207 7 C 0.022 3.978 8 H 0.140 0.860 9 N -0.371 5.371 10 C 0.380 3.620 11 O -0.397 6.397 12 C -0.169 4.169 13 C -0.072 4.072 14 C -0.150 4.150 15 C -0.225 4.225 16 C -0.090 4.090 17 C -0.171 4.171 18 O -0.340 6.340 19 Si 0.617 3.383 20 N -0.121 5.121 21 C -0.183 4.183 22 H 0.082 0.918 23 H 0.091 0.909 24 H 0.082 0.918 25 H 0.068 0.932 26 H 0.068 0.932 27 H 0.096 0.904 28 H 0.112 0.888 29 H 0.229 0.771 30 H 0.089 0.911 31 H 0.083 0.917 32 H 0.099 0.901 33 H 0.168 0.832 34 H 0.137 0.863 35 H 0.229 0.771 36 H -0.180 1.180 37 H -0.179 1.179 38 H 0.254 0.746 39 H 0.114 0.886 40 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges -1.530 0.111 -0.935 1.796 hybrid contribution -0.694 0.008 1.464 1.620 sum -2.224 0.119 0.528 2.289 Atomic orbital electron populations 1.21761 0.93559 1.02524 1.03188 1.22554 0.95794 0.83574 1.00218 1.87948 1.20016 1.26737 1.94556 1.23381 0.81712 0.97749 0.96367 0.88897 1.24019 0.98488 1.00337 0.97838 1.22230 0.98254 0.82487 0.94873 0.85994 1.45801 1.16974 1.11991 1.62340 1.17062 0.81963 0.85827 0.77118 1.90835 1.43603 1.49265 1.56022 1.20230 0.93428 0.88417 1.14841 1.19942 0.94663 0.93736 0.98843 1.20394 0.92600 0.99324 1.02709 1.20630 0.96404 0.96312 1.09151 1.21038 0.95067 0.89471 1.03403 1.24902 1.08771 0.93152 0.90266 1.86601 1.36571 1.85650 1.25214 0.94216 0.76999 0.78028 0.89087 1.41868 1.15362 1.07776 1.47076 1.23634 0.97475 0.98624 0.98542 0.91815 0.90911 0.91798 0.93191 0.93177 0.90410 0.88826 0.77063 0.91077 0.91669 0.90083 0.83227 0.86286 0.77141 1.18030 1.17884 0.74623 0.88638 0.89877 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.12 10.28 37.16 0.38 0.50 16 2 C 0.06 -0.02 6.50 37.16 0.24 0.23 16 3 O -0.37 -0.51 10.35 -35.23 -0.36 -0.87 16 4 C 0.07 -0.03 4.31 -25.92 -0.11 -0.14 16 5 H 0.09 -0.15 7.87 -51.93 -0.41 -0.56 16 6 C -0.17 0.04 7.71 -25.92 -0.20 -0.16 16 7 C 0.13 -0.03 4.24 -67.11 -0.28 -0.32 16 8 H 0.12 0.09 7.46 -51.93 -0.39 -0.29 16 9 N -0.72 0.15 5.35 -54.32 -0.29 -0.14 16 10 C 0.59 1.57 7.79 -12.85 -0.10 1.47 16 11 O -0.52 -3.00 14.40 5.19 0.07 -2.92 16 12 C -0.06 -0.10 7.06 -81.98 -0.58 -0.68 16 13 C -0.06 -0.14 6.21 -104.16 -0.65 -0.79 16 14 C -0.09 -0.17 9.83 36.01 0.35 0.19 16 15 C -0.20 -0.10 9.27 -39.98 -0.37 -0.47 16 16 C 0.03 -0.01 6.46 -81.95 -0.53 -0.54 16 17 C -0.06 0.09 3.08 36.00 0.11 0.20 16 18 O -0.53 0.10 12.88 -35.23 -0.45 -0.35 16 19 Si 0.72 -1.44 30.56 -169.99 -5.19 -6.63 16 20 N -0.52 0.27 5.99 -5.70 -0.03 0.23 16 21 C -0.14 0.18 7.66 -25.92 -0.20 -0.02 16 22 H 0.06 -0.02 8.14 -51.92 -0.42 -0.44 16 23 H 0.07 -0.14 8.14 -51.93 -0.42 -0.57 16 24 H 0.06 -0.03 8.14 -51.93 -0.42 -0.45 16 25 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 26 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 27 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 28 H 0.09 0.02 8.14 -51.93 -0.42 -0.40 16 29 H 0.40 -1.00 7.86 -40.82 -0.32 -1.32 16 30 H 0.07 0.10 8.14 -51.93 -0.42 -0.32 16 31 H 0.06 0.02 8.14 -51.93 -0.42 -0.40 16 32 H 0.08 0.28 6.49 -51.93 -0.34 -0.06 16 33 H 0.15 -0.19 6.19 -52.49 -0.32 -0.52 16 34 H 0.12 -0.30 7.96 -51.93 -0.41 -0.71 16 35 H 0.38 -0.99 8.70 45.56 0.40 -0.59 16 36 H -0.26 -0.29 7.11 56.52 0.40 0.12 16 37 H -0.25 -0.02 7.11 56.52 0.40 0.38 16 38 H 0.42 -1.16 8.19 -40.82 -0.33 -1.49 16 39 H 0.10 -0.13 8.12 -51.93 -0.42 -0.55 16 40 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 LS Contribution 334.40 15.07 5.04 5.04 Total: 0.00 -7.16 334.40 -9.13 -16.29 By element: Atomic # 1 Polarization: -4.14 SS G_CDS: -5.98 Total: -10.11 kcal Atomic # 6 Polarization: 1.40 SS G_CDS: -1.93 Total: -0.53 kcal Atomic # 7 Polarization: 0.42 SS G_CDS: -0.32 Total: 0.09 kcal Atomic # 8 Polarization: -3.40 SS G_CDS: -0.74 Total: -4.14 kcal Atomic # 14 Polarization: -1.44 SS G_CDS: -5.19 Total: -6.63 kcal Total LS contribution 5.04 Total: 5.04 kcal Total: -7.16 -9.13 -16.29 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10905468_13940406.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -31.449 kcal (2) G-P(sol) polarization free energy of solvation -7.158 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -38.607 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.133 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.291 kcal (6) G-S(sol) free energy of system = (1) + (5) -47.739 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds