Wall clock time and date at job start Sat Mar 6 2021 13:18:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 O 1.42904 * 109.47085 * 2 1 4 4 C 1.42898 * 113.99937 * 180.02562 * 3 2 1 5 5 H 1.09003 * 112.85176 * 341.19484 * 4 3 2 6 6 C 1.53776 * 113.69515 * 112.46489 * 4 3 2 7 7 C 1.53776 * 87.08162 * 139.99192 * 6 4 3 8 8 H 1.09002 * 113.69438 * 89.13165 * 7 6 4 9 9 N 1.46505 * 113.61633 * 220.01953 * 7 6 4 10 10 C 1.34772 * 120.00173 * 252.50413 * 9 7 6 11 11 O 1.21286 * 119.99960 * 359.97438 * 10 9 7 12 12 C 1.50697 * 120.00265 * 179.97438 * 10 9 7 13 13 C 1.50696 * 109.47484 * 179.97438 * 12 10 9 14 14 C 1.34854 * 125.89121 * 275.32341 * 13 12 10 15 15 C 1.40890 * 107.41722 * 180.15763 * 14 13 12 16 16 C 1.34856 * 107.41764 * 359.55980 * 15 14 13 17 17 C 1.50695 * 125.88889 * 180.28203 * 16 15 14 18 18 O 1.42900 * 109.47570 * 244.97987 * 17 16 15 19 19 Si 1.86301 * 109.47525 * 4.98602 * 17 16 15 20 20 N 1.36337 * 108.21648 * 0.27154 * 16 15 14 21 21 C 1.53777 * 87.08246 * 334.56969 * 7 6 4 22 22 H 1.08995 * 109.47077 * 300.00042 * 1 2 3 23 23 H 1.09004 * 109.46788 * 59.99539 * 1 2 3 24 24 H 1.08995 * 109.47462 * 179.97438 * 1 2 3 25 25 H 1.09004 * 109.47034 * 240.00193 * 2 1 3 26 26 H 1.08998 * 109.46826 * 120.00014 * 2 1 3 27 27 H 1.09004 * 113.61461 * 25.44119 * 6 4 3 28 28 H 1.09002 * 113.61344 * 254.54087 * 6 4 3 29 29 H 0.97000 * 119.99680 * 72.49546 * 9 7 6 30 30 H 1.09001 * 109.47211 * 59.98915 * 12 10 9 31 31 H 1.09004 * 109.46963 * 299.99521 * 12 10 9 32 32 H 1.07999 * 126.28920 * 0.02562 * 14 13 12 33 33 H 1.08002 * 126.29400 * 179.83402 * 15 14 13 34 34 H 1.09004 * 109.46734 * 124.98610 * 17 16 15 35 35 H 0.96697 * 113.99758 * 59.99913 * 18 17 16 36 36 H 1.48493 * 110.00106 * 179.97438 * 19 17 16 37 37 H 1.48500 * 109.99472 * 301.31710 * 19 17 16 38 38 H 0.97005 * 125.63361 * 179.97438 * 20 16 15 39 39 H 1.09006 * 113.61387 * 139.98301 * 21 7 6 40 40 H 1.09004 * 113.61194 * 270.80130 * 21 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0064 1.3473 0.0000 4 6 3.4309 1.4601 -0.0006 5 1 3.9281 0.5456 0.3229 6 6 4.0039 2.0455 -1.3020 7 6 4.9911 2.8301 -0.4219 8 1 5.9154 2.2914 -0.2131 9 7 5.2235 4.2021 -0.8803 10 6 6.3970 4.5305 -1.4559 11 8 7.2608 3.6905 -1.5941 12 6 6.6359 5.9416 -1.9279 13 6 8.0143 6.0439 -2.5285 14 6 9.1591 6.2569 -1.8485 15 6 10.2085 6.2861 -2.7881 16 6 9.6662 6.0801 -4.0055 17 6 10.4188 6.0242 -5.3099 18 8 10.0191 7.1182 -6.1378 19 14 12.2484 6.1338 -4.9766 20 7 8.3197 5.9308 -3.8525 21 6 3.9489 2.7250 0.7040 22 1 -0.3633 0.5138 0.8899 23 1 -0.3633 0.5139 -0.8900 24 1 -0.3634 -1.0276 -0.0005 25 1 1.8933 -0.5138 -0.8900 26 1 1.8933 -0.5138 0.8900 27 1 3.3010 2.6799 -1.8421 28 1 4.4830 1.3035 -1.9408 29 1 4.5328 4.8740 -0.7695 30 1 6.5563 6.6257 -1.0831 31 1 5.8914 6.2043 -2.6795 32 1 9.2539 6.3841 -0.7802 33 1 11.2555 6.4404 -2.5726 34 1 10.1974 5.0851 -5.8171 35 1 10.1866 7.9875 -5.7488 36 1 13.0018 6.0791 -6.2550 37 1 12.5589 7.3952 -4.2570 38 1 7.6840 5.7708 -4.5675 39 1 4.3837 2.5317 1.6847 40 1 3.2319 3.5460 0.7132 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10905468_14644196.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:18:58 Heat of formation + Delta-G solvation = -45.851413 kcal Electronic energy + Delta-G solvation = -21429.791334 eV Core-core repulsion = 18019.728674 eV Total energy + Delta-G solvation = -3410.062660 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 281.146 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -42.34266 -41.12784 -39.76593 -37.87229 -37.48537 -34.37747 -32.96536 -31.93442 -31.72926 -29.42659 -26.78334 -25.82318 -24.59338 -23.68729 -21.90624 -21.37337 -21.22126 -20.78737 -19.01820 -18.34853 -18.06322 -17.14851 -16.70861 -16.54933 -16.36649 -16.32515 -16.03116 -15.32407 -15.04493 -14.72788 -14.54097 -14.25044 -14.07432 -13.99222 -13.81385 -13.56128 -13.47048 -13.42890 -12.90331 -12.67231 -12.48247 -12.19681 -12.10457 -11.94905 -11.84393 -11.78045 -10.96140 -10.81194 -10.43429 -10.05253 -9.80430 -8.97726 -4.85865 1.10102 1.26629 1.60127 1.66171 1.87205 1.89872 2.25665 2.49293 2.85154 3.38713 3.44001 3.53366 3.67742 3.79388 3.80137 3.85893 4.05115 4.16747 4.20543 4.25100 4.40278 4.43070 4.47766 4.49015 4.61881 4.69968 4.71676 4.79842 4.82018 4.92943 4.96862 5.01806 5.07477 5.24986 5.25899 5.28694 5.51745 5.98587 6.12826 6.28252 6.43058 6.52739 6.66634 7.25258 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.152 4.152 2 C 0.049 3.951 3 O -0.391 6.391 4 C 0.061 3.939 5 H 0.100 0.900 6 C -0.166 4.166 7 C 0.125 3.875 8 H 0.102 0.898 9 N -0.707 5.707 10 C 0.512 3.488 11 O -0.574 6.574 12 C -0.068 4.068 13 C 0.034 3.966 14 C -0.200 4.200 15 C -0.202 4.202 16 C -0.018 4.018 17 C -0.061 4.061 18 O -0.552 6.552 19 Si 0.790 3.210 20 N -0.537 5.537 21 C -0.132 4.132 22 H 0.059 0.941 23 H 0.057 0.943 24 H 0.085 0.915 25 H 0.052 0.948 26 H 0.058 0.942 27 H 0.092 0.908 28 H 0.066 0.934 29 H 0.418 0.582 30 H 0.144 0.856 31 H 0.126 0.874 32 H 0.141 0.859 33 H 0.150 0.850 34 H 0.118 0.882 35 H 0.388 0.612 36 H -0.296 1.296 37 H -0.280 1.280 38 H 0.418 0.582 39 H 0.089 0.911 40 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.928 -0.024 2.939 4.906 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.209 4.209 2 C -0.027 4.027 3 O -0.311 6.311 4 C 0.003 3.997 5 H 0.117 0.883 6 C -0.205 4.205 7 C 0.019 3.981 8 H 0.120 0.880 9 N -0.359 5.359 10 C 0.299 3.701 11 O -0.453 6.453 12 C -0.108 4.108 13 C -0.080 4.080 14 C -0.224 4.224 15 C -0.227 4.227 16 C -0.131 4.131 17 C -0.170 4.170 18 O -0.360 6.360 19 Si 0.693 3.307 20 N -0.133 5.133 21 C -0.170 4.170 22 H 0.078 0.922 23 H 0.076 0.924 24 H 0.103 0.897 25 H 0.070 0.930 26 H 0.076 0.924 27 H 0.110 0.890 28 H 0.084 0.916 29 H 0.255 0.745 30 H 0.162 0.838 31 H 0.144 0.856 32 H 0.159 0.841 33 H 0.167 0.833 34 H 0.136 0.864 35 H 0.237 0.763 36 H -0.224 1.224 37 H -0.206 1.206 38 H 0.256 0.744 39 H 0.107 0.893 40 H 0.122 0.878 Dipole moment (debyes) X Y Z Total from point charges -3.004 -0.518 2.200 3.759 hybrid contribution -1.008 0.858 -0.565 1.440 sum -4.012 0.340 1.634 4.346 Atomic orbital electron populations 1.21773 0.93308 1.03203 1.02663 1.22674 0.96085 0.83193 1.00737 1.87919 1.20897 1.27582 1.94667 1.23509 0.81099 0.98653 0.96455 0.88261 1.23975 0.98478 1.00195 0.97874 1.22077 0.97423 0.83293 0.95324 0.87996 1.45817 1.17146 1.11901 1.61045 1.21033 0.81426 0.90814 0.76781 1.90749 1.45223 1.52644 1.56656 1.20250 0.92680 0.93966 1.03871 1.19924 0.96321 1.08505 0.83300 1.20852 0.91797 1.10157 0.99596 1.20918 0.99889 1.10039 0.91815 1.20902 0.83981 1.11279 0.96937 1.24942 1.10843 0.92680 0.88528 1.86544 1.85315 1.17721 1.46420 0.93232 0.70919 0.86779 0.79741 1.41901 1.07618 1.55936 1.07812 1.23554 0.96939 0.98200 0.98331 0.92167 0.92434 0.89670 0.92959 0.92370 0.88961 0.91563 0.74454 0.83845 0.85564 0.84080 0.83263 0.86416 0.76276 1.22408 1.20579 0.74414 0.89264 0.87837 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.29 10.28 71.98 0.74 1.03 16 2 C 0.05 -0.04 6.50 71.98 0.47 0.43 16 3 O -0.39 -0.89 10.36 -148.98 -1.54 -2.43 16 4 C 0.06 -0.08 4.31 31.12 0.13 0.06 16 5 H 0.10 -0.32 7.87 -2.39 -0.02 -0.33 16 6 C -0.17 0.11 7.71 31.12 0.24 0.35 16 7 C 0.12 -0.16 4.24 45.51 0.19 0.03 16 8 H 0.10 0.27 7.46 -2.39 -0.02 0.25 16 9 N -0.71 2.55 5.35 -440.04 -2.36 0.19 16 10 C 0.51 0.73 7.82 87.66 0.69 1.42 16 11 O -0.57 -6.72 15.63 -3.05 -0.05 -6.77 16 12 C -0.07 0.30 6.24 29.10 0.18 0.48 16 13 C 0.03 0.09 5.66 41.08 0.23 0.33 16 14 C -0.20 -1.05 10.77 22.14 0.24 -0.81 16 15 C -0.20 -0.99 9.37 22.14 0.21 -0.78 16 16 C -0.02 -0.07 6.50 41.08 0.27 0.20 16 17 C -0.06 -0.12 3.08 71.23 0.22 0.10 16 18 O -0.55 -1.99 12.88 -148.98 -1.92 -3.91 16 19 Si 0.79 0.18 30.60 68.60 2.10 2.28 16 20 N -0.54 -1.54 6.07 -171.12 -1.04 -2.58 16 21 C -0.13 0.50 7.66 31.12 0.24 0.74 16 22 H 0.06 -0.07 8.14 -2.39 -0.02 -0.09 16 23 H 0.06 -0.04 8.14 -2.39 -0.02 -0.06 16 24 H 0.08 -0.40 8.14 -2.39 -0.02 -0.42 16 25 H 0.05 -0.09 8.14 -2.39 -0.02 -0.11 16 26 H 0.06 -0.16 8.14 -2.39 -0.02 -0.18 16 27 H 0.09 -0.04 8.14 -2.38 -0.02 -0.05 16 28 H 0.07 0.07 8.14 -2.39 -0.02 0.05 16 29 H 0.42 -4.09 8.73 -92.71 -0.81 -4.90 16 30 H 0.14 -1.37 8.14 -2.39 -0.02 -1.39 16 31 H 0.13 -1.22 8.14 -2.39 -0.02 -1.24 16 32 H 0.14 0.43 8.06 -2.91 -0.02 0.41 16 33 H 0.15 0.27 6.24 -2.91 -0.02 0.25 16 34 H 0.12 0.09 7.96 -2.38 -0.02 0.07 16 35 H 0.39 -0.65 8.70 -74.06 -0.64 -1.29 16 36 H -0.30 -1.96 7.11 99.48 0.71 -1.25 16 37 H -0.28 -1.11 7.11 99.48 0.71 -0.40 16 38 H 0.42 -0.20 8.96 -92.70 -0.83 -1.03 16 39 H 0.09 -0.44 8.14 -2.38 -0.02 -0.46 16 40 H 0.10 -0.51 8.12 -2.39 -0.02 -0.53 16 Total: 0.00 -20.41 338.77 -1.94 -22.36 By element: Atomic # 1 Polarization: -11.51 SS G_CDS: -1.18 Total: -12.69 kcal Atomic # 6 Polarization: -0.48 SS G_CDS: 4.05 Total: 3.56 kcal Atomic # 7 Polarization: 1.01 SS G_CDS: -3.40 Total: -2.39 kcal Atomic # 8 Polarization: -9.60 SS G_CDS: -3.51 Total: -13.11 kcal Atomic # 14 Polarization: 0.18 SS G_CDS: 2.10 Total: 2.28 kcal Total: -20.41 -1.94 -22.36 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10905468_14644196.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -23.496 kcal (2) G-P(sol) polarization free energy of solvation -20.413 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -43.909 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.942 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.356 kcal (6) G-S(sol) free energy of system = (1) + (5) -45.851 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds