Wall clock time and date at job start Sat Mar 6 2021 13:19:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 O 1.42895 * 109.47290 * 2 1 4 4 C 1.42896 * 114.00195 * 179.97438 * 3 2 1 5 5 H 1.08997 * 112.85345 * 18.80085 * 4 3 2 6 6 C 1.53779 * 113.61470 * 150.00163 * 4 3 2 7 7 C 1.53779 * 87.08205 * 140.06612 * 6 4 3 8 8 H 1.08997 * 113.61810 * 89.19970 * 7 6 4 9 9 N 1.46503 * 113.61677 * 220.01788 * 7 6 4 10 10 C 1.34769 * 120.00291 * 205.00114 * 9 7 6 11 11 O 1.21696 * 120.00472 * 5.63107 * 10 9 7 12 12 C 1.46680 * 120.00114 * 185.63048 * 10 9 7 13 13 C 1.37887 * 126.22328 * 355.27300 * 12 10 9 14 14 C 1.39875 * 107.09048 * 180.02562 * 13 12 10 15 15 Br 1.89104 * 126.07403 * 179.97438 * 14 13 12 16 16 C 1.35504 * 107.85290 * 0.02562 * 14 13 12 17 17 C 1.50706 * 125.57051 * 179.97438 * 16 14 13 18 18 O 1.42898 * 109.47022 * 210.02247 * 17 16 14 19 19 Si 1.86305 * 109.46737 * 330.01693 * 17 16 14 20 20 N 1.35599 * 108.85754 * 0.23518 * 16 14 13 21 21 C 1.46502 * 125.67519 * 179.72116 * 20 16 14 22 22 C 1.53781 * 87.08207 * 334.56468 * 7 6 4 23 23 H 1.09002 * 109.47297 * 179.97438 * 1 2 3 24 24 H 1.09001 * 109.47165 * 299.99985 * 1 2 3 25 25 H 1.08997 * 109.46863 * 60.00135 * 1 2 3 26 26 H 1.08995 * 109.47158 * 239.99558 * 2 1 3 27 27 H 1.09006 * 109.46591 * 119.99834 * 2 1 3 28 28 H 1.09000 * 113.61837 * 25.51681 * 6 4 3 29 29 H 1.09000 * 113.61525 * 254.60826 * 6 4 3 30 30 H 0.97005 * 119.99268 * 24.99659 * 9 7 6 31 31 H 1.07999 * 126.45228 * 0.05039 * 13 12 10 32 32 H 1.08992 * 109.47406 * 90.01855 * 17 16 14 33 33 H 0.96697 * 114.00278 * 59.99100 * 18 17 16 34 34 H 1.48504 * 109.99556 * 180.02562 * 19 17 16 35 35 H 1.48494 * 110.00004 * 301.32107 * 19 17 16 36 36 H 1.08996 * 109.47074 * 83.99355 * 21 20 16 37 37 H 1.09003 * 109.47307 * 203.99763 * 21 20 16 38 38 H 1.09004 * 109.46759 * 323.99495 * 21 20 16 39 39 H 1.09006 * 113.61356 * 139.97918 * 22 7 6 40 40 H 1.08997 * 113.61701 * 270.88787 * 22 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3472 0.0000 4 6 3.4308 1.4601 0.0006 5 1 3.9280 0.5456 -0.3228 6 6 3.9489 2.7250 -0.7039 7 6 4.9910 2.8301 0.4221 8 1 5.9153 2.2914 0.2133 9 7 5.2234 4.2020 0.8805 10 6 6.3969 4.5305 1.4561 11 8 7.3007 3.7168 1.5029 12 6 6.5850 5.8688 2.0262 13 6 5.6881 6.9143 1.9642 14 6 6.2705 7.9957 2.6333 15 35 5.4986 9.7060 2.8687 16 6 7.4865 7.6006 3.0820 17 6 8.4553 8.4560 3.8573 18 8 9.7922 8.0407 3.5705 19 14 8.2401 10.2398 3.3650 20 7 7.6916 6.3116 2.7145 21 6 8.8903 5.5208 3.0046 22 6 4.0038 2.0455 1.3022 23 1 -0.3634 -1.0277 -0.0005 24 1 -0.3633 0.5138 0.8900 25 1 -0.3633 0.5138 -0.8900 26 1 1.8933 -0.5139 -0.8899 27 1 1.8932 -0.5139 0.8901 28 1 3.2310 3.5452 -0.7123 29 1 4.3837 2.5317 -1.6845 30 1 4.5326 4.8739 0.7697 31 1 4.7185 6.9006 1.4888 32 1 8.2622 8.3477 4.9245 33 1 10.0340 8.1102 2.6369 34 1 9.1903 11.0938 4.1220 35 1 8.4695 10.3954 1.9061 36 1 8.8098 5.0922 4.0035 37 1 8.9830 4.7193 2.2717 38 1 9.7699 6.1627 2.9543 39 1 4.4828 1.3034 1.9409 40 1 3.3008 2.6798 1.8421 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10905468_5000100.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:19:59 Heat of formation + Delta-G solvation = -34.744802 kcal Electronic energy + Delta-G solvation = -23998.566955 eV Core-core repulsion = 20249.167912 eV Total energy + Delta-G solvation = -3749.399044 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.057 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -42.94164 -41.10082 -39.71237 -38.06951 -37.52141 -34.95482 -34.30256 -32.36560 -31.72898 -31.13474 -27.55969 -27.26629 -26.77882 -25.04350 -23.71571 -23.13561 -21.56872 -21.30829 -20.49014 -18.95795 -18.35332 -18.26412 -17.24590 -16.95175 -16.67345 -16.52437 -16.15219 -16.07342 -15.61036 -15.44405 -15.20361 -14.68668 -14.56936 -14.54024 -14.09626 -14.01628 -13.72933 -13.49374 -13.44208 -13.20007 -12.82966 -12.79991 -12.47984 -12.46342 -12.13916 -12.06652 -11.93430 -11.77710 -11.66941 -11.19784 -10.84948 -10.42231 -10.21310 -9.90091 -9.36648 -4.69841 0.11154 0.33597 0.88405 1.17625 1.43320 1.55563 1.91417 2.09297 2.21236 2.82467 3.01763 3.26241 3.39738 3.51727 3.57138 3.74035 3.80036 3.87873 4.09566 4.19016 4.24607 4.25346 4.32862 4.39026 4.40151 4.50132 4.59450 4.65018 4.71379 4.73268 4.83591 4.93446 4.96385 5.02087 5.04825 5.20567 5.27582 5.43330 5.55758 5.75554 6.19233 6.29777 6.37256 6.99693 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C 0.050 3.950 3 O -0.390 6.390 4 C 0.063 3.937 5 H 0.102 0.898 6 C -0.133 4.133 7 C 0.126 3.874 8 H 0.110 0.890 9 N -0.690 5.690 10 C 0.592 3.408 11 O -0.577 6.577 12 C -0.059 4.059 13 C -0.091 4.091 14 C -0.191 4.191 15 Br 0.091 6.909 16 C 0.057 3.943 17 C -0.040 4.040 18 O -0.540 6.540 19 Si 0.630 3.370 20 N -0.390 5.390 21 C 0.052 3.948 22 C -0.166 4.166 23 H 0.084 0.916 24 H 0.057 0.943 25 H 0.059 0.941 26 H 0.058 0.942 27 H 0.053 0.947 28 H 0.104 0.896 29 H 0.091 0.909 30 H 0.418 0.582 31 H 0.187 0.813 32 H 0.140 0.860 33 H 0.387 0.613 34 H -0.268 1.268 35 H -0.279 1.279 36 H 0.080 0.920 37 H 0.097 0.903 38 H 0.115 0.885 39 H 0.070 0.930 40 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.752 -1.097 -1.408 5.076 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.210 4.210 2 C -0.027 4.027 3 O -0.310 6.310 4 C 0.005 3.995 5 H 0.120 0.880 6 C -0.171 4.171 7 C 0.021 3.979 8 H 0.128 0.872 9 N -0.341 5.341 10 C 0.381 3.619 11 O -0.458 6.458 12 C -0.173 4.173 13 C -0.117 4.117 14 C -0.276 4.276 15 Br 0.175 6.825 16 C -0.066 4.066 17 C -0.151 4.151 18 O -0.348 6.348 19 Si 0.531 3.469 20 N -0.062 5.062 21 C -0.087 4.087 22 C -0.205 4.205 23 H 0.103 0.897 24 H 0.076 0.924 25 H 0.078 0.922 26 H 0.076 0.924 27 H 0.071 0.929 28 H 0.123 0.877 29 H 0.110 0.890 30 H 0.256 0.744 31 H 0.204 0.796 32 H 0.158 0.842 33 H 0.237 0.763 34 H -0.194 1.194 35 H -0.204 1.204 36 H 0.098 0.902 37 H 0.115 0.885 38 H 0.133 0.867 39 H 0.089 0.911 40 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges -3.839 -0.575 -0.945 3.995 hybrid contribution 1.103 -0.986 -0.561 1.583 sum -2.736 -1.561 -1.506 3.492 Atomic orbital electron populations 1.21775 0.93383 1.03166 1.02674 1.22670 0.96036 0.83183 1.00767 1.87922 1.20841 1.27576 1.94643 1.23479 0.81185 0.98603 0.96274 0.88002 1.23575 0.96821 0.98395 0.98289 1.22226 0.98013 0.81984 0.95711 0.87204 1.45453 1.16092 1.12560 1.60015 1.17018 0.82799 0.84780 0.77320 1.90782 1.42286 1.52387 1.60392 1.20169 0.90929 0.96249 1.09916 1.21514 1.00236 0.89228 1.00761 1.20688 0.98096 0.94718 1.14098 1.96316 1.73484 1.16372 1.96372 1.21011 0.97261 0.85465 1.02840 1.24730 0.80332 1.06647 1.03349 1.86544 1.28177 1.87280 1.32801 0.92695 0.98622 0.75204 0.80351 1.43939 1.14433 1.09120 1.38678 1.22726 0.85250 0.97125 1.03647 1.24000 0.98350 1.00155 0.97966 0.89728 0.92401 0.92201 0.92364 0.92878 0.87733 0.89030 0.74369 0.79571 0.84221 0.76318 1.19426 1.20407 0.90177 0.88464 0.86688 0.91076 0.88820 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.36 10.28 71.98 0.74 1.10 16 2 C 0.05 -0.08 6.50 71.98 0.47 0.39 16 3 O -0.39 -0.57 10.36 -148.98 -1.54 -2.12 16 4 C 0.06 -0.15 4.31 31.12 0.13 -0.01 16 5 H 0.10 -0.46 7.87 -2.39 -0.02 -0.48 16 6 C -0.13 0.60 7.66 31.12 0.24 0.84 16 7 C 0.13 -0.24 4.28 45.52 0.19 -0.05 16 8 H 0.11 0.10 7.41 -2.39 -0.02 0.08 16 9 N -0.69 1.41 5.34 -444.00 -2.37 -0.96 16 10 C 0.59 2.42 7.77 86.45 0.67 3.09 16 11 O -0.58 -6.15 14.12 -4.34 -0.06 -6.21 16 12 C -0.06 -0.16 6.89 40.35 0.28 0.12 16 13 C -0.09 0.13 10.34 22.58 0.23 0.37 16 14 C -0.19 -0.04 6.16 22.03 0.14 0.09 16 15 Br 0.09 -0.22 28.24 -20.37 -0.58 -0.80 16 16 C 0.06 0.11 6.15 41.35 0.25 0.36 16 17 C -0.04 -0.03 2.99 71.24 0.21 0.18 16 18 O -0.54 -0.75 10.12 -148.98 -1.51 -2.26 16 19 Si 0.63 1.57 27.10 68.60 1.86 3.43 16 20 N -0.39 -1.28 3.16 -519.59 -1.64 -2.93 16 21 C 0.05 0.11 10.30 127.77 1.32 1.42 16 22 C -0.17 0.27 7.71 31.12 0.24 0.51 16 23 H 0.08 -0.42 8.14 -2.39 -0.02 -0.44 16 24 H 0.06 -0.06 8.14 -2.39 -0.02 -0.08 16 25 H 0.06 -0.09 8.14 -2.39 -0.02 -0.11 16 26 H 0.06 -0.20 8.14 -2.39 -0.02 -0.22 16 27 H 0.05 -0.13 8.14 -2.38 -0.02 -0.15 16 28 H 0.10 -0.57 8.12 -2.39 -0.02 -0.59 16 29 H 0.09 -0.53 8.14 -2.39 -0.02 -0.55 16 30 H 0.42 -3.10 7.63 -92.70 -0.71 -3.81 16 31 H 0.19 -1.54 7.45 -2.91 -0.02 -1.56 16 32 H 0.14 -0.18 7.96 -2.39 -0.02 -0.20 16 33 H 0.39 -1.20 8.29 -74.06 -0.61 -1.81 16 34 H -0.27 -2.30 7.11 99.48 0.71 -1.59 16 35 H -0.28 -2.08 7.11 99.48 0.71 -1.37 16 36 H 0.08 0.14 8.14 -2.39 -0.02 0.12 16 37 H 0.10 0.48 5.92 -2.39 -0.01 0.46 16 38 H 0.12 -0.09 5.25 -2.38 -0.01 -0.10 16 39 H 0.07 -0.04 8.14 -2.38 -0.02 -0.06 16 40 H 0.09 -0.09 8.14 -2.39 -0.02 -0.11 16 Total: 0.00 -15.08 343.15 -0.93 -16.01 By element: Atomic # 1 Polarization: -12.37 SS G_CDS: -0.21 Total: -12.58 kcal Atomic # 6 Polarization: 3.29 SS G_CDS: 5.12 Total: 8.41 kcal Atomic # 7 Polarization: 0.13 SS G_CDS: -4.01 Total: -3.89 kcal Atomic # 8 Polarization: -7.48 SS G_CDS: -3.11 Total: -10.59 kcal Atomic # 14 Polarization: 1.57 SS G_CDS: 1.86 Total: 3.43 kcal Atomic # 35 Polarization: -0.22 SS G_CDS: -0.58 Total: -0.80 kcal Total: -15.08 -0.93 -16.01 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10905468_5000100.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -18.733 kcal (2) G-P(sol) polarization free energy of solvation -15.083 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -33.816 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.929 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.012 kcal (6) G-S(sol) free energy of system = (1) + (5) -34.745 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds