Wall clock time and date at job start Sat Mar 6 2021 13:20:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 O 1.42891 * 109.47175 * 2 1 4 4 C 1.42905 * 113.99873 * 179.97438 * 3 2 1 5 5 H 1.09002 * 112.84917 * 339.66862 * 4 3 2 6 6 C 1.53786 * 113.61467 * 110.86351 * 4 3 2 7 7 C 1.54049 * 86.98426 * 140.01833 * 6 4 3 8 8 H 1.08996 * 113.68970 * 89.12734 * 7 6 4 9 9 N 1.46497 * 113.61947 * 220.02008 * 7 6 4 10 10 C 1.34773 * 120.00221 * 252.49496 * 9 7 6 11 11 O 1.21693 * 120.00122 * 0.02562 * 10 9 7 12 12 C 1.46683 * 120.00100 * 180.02562 * 10 9 7 13 13 C 1.37874 * 126.23117 * 179.69571 * 12 10 9 14 14 C 1.39836 * 107.08311 * 179.84773 * 13 12 10 15 15 C 1.35457 * 107.86592 * 0.41402 * 14 13 12 16 16 C 1.50697 * 125.56812 * 179.70491 * 15 14 13 17 17 O 1.42898 * 109.47250 * 120.04324 * 16 15 14 18 18 Si 1.86302 * 109.46984 * 0.04390 * 16 15 14 19 19 N 1.35536 * 108.87001 * 359.74478 * 15 14 13 20 20 C 1.53781 * 113.61505 * 208.47211 * 4 3 2 21 21 H 1.09005 * 109.47342 * 179.97438 * 1 2 3 22 22 H 1.09001 * 109.47228 * 299.99950 * 1 2 3 23 23 H 1.08994 * 109.47534 * 59.99806 * 1 2 3 24 24 H 1.08999 * 109.46770 * 239.99796 * 2 1 3 25 25 H 1.09002 * 109.47149 * 120.00686 * 2 1 3 26 26 H 1.08992 * 113.61675 * 254.61578 * 6 4 3 27 27 H 1.09000 * 113.60973 * 25.51865 * 6 4 3 28 28 H 0.97001 * 119.99862 * 72.50056 * 9 7 6 29 29 H 1.07999 * 126.45958 * 359.96283 * 13 12 10 30 30 H 1.07992 * 126.07074 * 180.17553 * 14 13 12 31 31 H 1.09001 * 109.47482 * 240.04735 * 16 15 14 32 32 H 0.96699 * 113.99604 * 300.00036 * 17 16 15 33 33 H 1.48492 * 110.00107 * 58.68023 * 18 16 15 34 34 H 1.48501 * 110.00159 * 180.02562 * 18 16 15 35 35 H 0.96994 * 125.68015 * 179.97438 * 19 15 14 36 36 H 1.08999 * 113.61567 * 334.48276 * 20 4 3 37 37 H 1.08998 * 113.61196 * 105.38630 * 20 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3472 0.0000 4 6 3.4309 1.4600 0.0006 5 1 3.9270 0.5545 0.3499 6 6 4.0059 2.0087 -1.3159 7 6 4.9924 2.8182 -0.4530 8 1 5.9159 2.2854 -0.2270 9 7 5.2262 4.1773 -0.9474 10 6 6.4014 4.4902 -1.5282 11 8 7.2682 3.6438 -1.6423 12 6 6.6357 5.8512 -2.0228 13 6 7.7853 6.3112 -2.6291 14 6 7.5746 7.6580 -2.9409 15 6 6.3311 7.9922 -2.5204 16 6 5.6974 9.3531 -2.6525 17 8 4.5057 9.2498 -3.4344 18 14 6.8899 10.5149 -3.4886 19 7 5.7501 6.9031 -1.9607 20 6 3.9469 2.7434 0.6723 21 1 -0.3634 -1.0277 -0.0005 22 1 -0.3634 0.5138 0.8900 23 1 -0.3634 0.5138 -0.8899 24 1 1.8932 -0.5139 -0.8900 25 1 1.8933 -0.5139 0.8899 26 1 4.4853 1.2490 -1.9332 27 1 3.3041 2.6282 -1.8742 28 1 4.5352 4.8519 -0.8568 29 1 8.6793 5.7388 -2.8277 30 1 8.2796 8.3160 -3.4269 31 1 5.4503 9.7365 -1.6626 32 1 4.6507 8.9143 -4.3297 33 1 7.2594 9.9873 -4.8265 34 1 6.2770 11.8607 -3.6243 35 1 4.8588 6.8705 -1.5795 36 1 3.2291 3.5635 0.6566 37 1 4.3788 2.5764 1.6591 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10905468_6580494.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:20:12 Heat of formation + Delta-G solvation = -43.797906 kcal Electronic energy + Delta-G solvation = -19901.572171 eV Core-core repulsion = 16647.136177 eV Total energy + Delta-G solvation = -3254.435994 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 267.130 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -42.55218 -41.06894 -39.70369 -37.85367 -37.53964 -34.56072 -32.19689 -31.81455 -31.28297 -27.25654 -26.84376 -25.21954 -23.75949 -22.99339 -21.58417 -21.45502 -20.89560 -19.74797 -18.38659 -18.19313 -16.86550 -16.75252 -16.68596 -16.52751 -16.06958 -15.88189 -15.23015 -15.19948 -14.71698 -14.53868 -14.34412 -14.00448 -13.96588 -13.65000 -13.56645 -13.47519 -12.85239 -12.54197 -12.35651 -12.19205 -12.02410 -11.90465 -11.82256 -11.34806 -10.84509 -10.48136 -10.27596 -10.08519 -9.29784 -4.82755 0.26931 1.22408 1.54202 1.70439 1.86402 1.95018 2.20351 2.23039 2.77333 3.33577 3.36345 3.46744 3.58474 3.72045 3.76471 3.84347 4.14771 4.20844 4.25272 4.31337 4.36824 4.46191 4.50885 4.62621 4.64786 4.77499 4.87662 4.90247 4.93920 4.97505 5.00103 5.10715 5.23073 5.34445 5.57442 5.78510 6.23134 6.26639 6.39250 6.42298 6.98194 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C 0.049 3.951 3 O -0.392 6.392 4 C 0.064 3.936 5 H 0.104 0.896 6 C -0.168 4.168 7 C 0.123 3.877 8 H 0.111 0.889 9 N -0.705 5.705 10 C 0.590 3.410 11 O -0.569 6.569 12 C -0.066 4.066 13 C -0.116 4.116 14 C -0.204 4.204 15 C 0.032 3.968 16 C -0.064 4.064 17 O -0.549 6.549 18 Si 0.797 3.203 19 N -0.513 5.513 20 C -0.132 4.132 21 H 0.085 0.915 22 H 0.059 0.941 23 H 0.056 0.944 24 H 0.053 0.947 25 H 0.060 0.940 26 H 0.071 0.929 27 H 0.089 0.911 28 H 0.409 0.591 29 H 0.147 0.853 30 H 0.169 0.831 31 H 0.135 0.865 32 H 0.389 0.611 33 H -0.283 1.283 34 H -0.299 1.299 35 H 0.427 0.573 36 H 0.101 0.899 37 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.578 1.445 2.285 3.130 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.210 4.210 2 C -0.027 4.027 3 O -0.311 6.311 4 C 0.006 3.994 5 H 0.122 0.878 6 C -0.207 4.207 7 C 0.018 3.982 8 H 0.129 0.871 9 N -0.356 5.356 10 C 0.379 3.621 11 O -0.448 6.448 12 C -0.179 4.179 13 C -0.143 4.143 14 C -0.228 4.228 15 C -0.087 4.087 16 C -0.173 4.173 17 O -0.357 6.357 18 Si 0.700 3.300 19 N -0.110 5.110 20 C -0.170 4.170 21 H 0.104 0.896 22 H 0.078 0.922 23 H 0.075 0.925 24 H 0.071 0.929 25 H 0.078 0.922 26 H 0.090 0.910 27 H 0.107 0.893 28 H 0.245 0.755 29 H 0.165 0.835 30 H 0.186 0.814 31 H 0.153 0.847 32 H 0.239 0.761 33 H -0.209 1.209 34 H -0.227 1.227 35 H 0.267 0.733 36 H 0.119 0.881 37 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges -1.396 1.660 2.165 3.064 hybrid contribution -1.333 -0.742 -0.663 1.664 sum -2.729 0.918 1.501 3.247 Atomic orbital electron populations 1.21775 0.93355 1.03230 1.02615 1.22678 0.96046 0.83116 1.00850 1.87918 1.20853 1.27709 1.94656 1.23491 0.81170 0.98663 0.96088 0.87787 1.24044 0.98350 1.00213 0.98070 1.22278 0.98031 0.82543 0.95342 0.87129 1.45697 1.16287 1.13309 1.60298 1.17280 0.82073 0.85860 0.76907 1.90837 1.45499 1.49853 1.58654 1.20302 0.94213 0.88660 1.14774 1.21504 0.97212 0.95605 0.99968 1.20947 0.96985 0.96193 1.08700 1.21292 0.94940 0.90285 1.02193 1.25106 0.94195 0.95413 1.02546 1.86577 1.31125 1.87941 1.30079 0.93282 0.82394 0.73514 0.80810 1.41900 1.15459 1.07912 1.45757 1.23552 0.96717 0.98191 0.98531 0.89605 0.92188 0.92517 0.92881 0.92219 0.90998 0.89274 0.75452 0.83536 0.81370 0.84706 0.76086 1.20916 1.22683 0.73337 0.88103 0.88798 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.24 10.28 71.98 0.74 0.98 16 2 C 0.05 -0.03 6.50 71.98 0.47 0.43 16 3 O -0.39 -1.02 10.35 -148.98 -1.54 -2.56 16 4 C 0.06 -0.07 4.29 31.12 0.13 0.07 16 5 H 0.10 -0.36 7.88 -2.39 -0.02 -0.38 16 6 C -0.17 -0.04 7.73 31.21 0.24 0.20 16 7 C 0.12 0.00 4.25 45.61 0.19 0.19 16 8 H 0.11 0.31 7.46 -2.39 -0.02 0.30 16 9 N -0.71 0.14 5.35 -443.57 -2.37 -2.23 16 10 C 0.59 3.75 7.79 86.45 0.67 4.42 16 11 O -0.57 -8.29 16.48 -4.32 -0.07 -8.36 16 12 C -0.07 -0.23 7.06 40.35 0.28 0.06 16 13 C -0.12 -0.47 10.65 22.57 0.24 -0.23 16 14 C -0.20 0.11 9.32 22.01 0.21 0.32 16 15 C 0.03 -0.07 6.47 41.34 0.27 0.20 16 16 C -0.06 0.30 3.08 71.23 0.22 0.52 16 17 O -0.55 1.02 12.88 -148.98 -1.92 -0.90 16 18 Si 0.80 -4.03 30.54 68.60 2.10 -1.93 16 19 N -0.51 1.12 5.99 -171.92 -1.03 0.09 16 20 C -0.13 0.41 7.66 31.12 0.24 0.65 16 21 H 0.09 -0.38 8.14 -2.38 -0.02 -0.40 16 22 H 0.06 -0.05 8.14 -2.39 -0.02 -0.07 16 23 H 0.06 -0.01 8.14 -2.39 -0.02 -0.03 16 24 H 0.05 -0.09 8.14 -2.39 -0.02 -0.10 16 25 H 0.06 -0.16 8.14 -2.39 -0.02 -0.18 16 26 H 0.07 0.10 8.14 -2.39 -0.02 0.08 16 27 H 0.09 0.10 8.14 -2.39 -0.02 0.08 16 28 H 0.41 -2.35 7.86 -92.71 -0.73 -3.08 16 29 H 0.15 0.67 8.06 -2.91 -0.02 0.64 16 30 H 0.17 -0.83 6.17 -2.91 -0.02 -0.85 16 31 H 0.14 -0.99 7.96 -2.39 -0.02 -1.01 16 32 H 0.39 -2.49 8.70 -74.06 -0.64 -3.13 16 33 H -0.28 0.08 7.11 99.48 0.71 0.79 16 34 H -0.30 -0.71 7.11 99.48 0.71 -0.01 16 35 H 0.43 -2.99 8.19 -92.71 -0.76 -3.74 16 36 H 0.10 -0.40 8.12 -2.39 -0.02 -0.42 16 37 H 0.09 -0.45 8.14 -2.39 -0.02 -0.47 16 Total: 0.00 -18.15 316.43 -1.93 -20.08 By element: Atomic # 1 Polarization: -11.00 SS G_CDS: -0.99 Total: -11.99 kcal Atomic # 6 Polarization: 3.90 SS G_CDS: 3.91 Total: 7.81 kcal Atomic # 7 Polarization: 1.26 SS G_CDS: -3.40 Total: -2.14 kcal Atomic # 8 Polarization: -8.29 SS G_CDS: -3.53 Total: -11.82 kcal Atomic # 14 Polarization: -4.03 SS G_CDS: 2.10 Total: -1.93 kcal Total: -18.15 -1.93 -20.08 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10905468_6580494.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -23.721 kcal (2) G-P(sol) polarization free energy of solvation -18.151 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -41.872 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.926 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.077 kcal (6) G-S(sol) free energy of system = (1) + (5) -43.798 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds