Wall clock time and date at job start Sat Mar 6 2021 15:33:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34232 * 116.99820 * 2 1 4 4 O 1.20826 * 119.99946 * 359.97438 * 3 2 1 5 5 C 1.50693 * 120.00017 * 179.97438 * 3 2 1 6 6 H 1.09006 * 112.85032 * 311.19818 * 5 3 2 7 7 C 1.53964 * 113.66718 * 82.43590 * 5 3 2 8 8 C 1.53781 * 87.01877 * 139.93564 * 7 5 3 9 9 H 1.09001 * 113.61611 * 89.22937 * 8 7 5 10 10 N 1.46506 * 113.61339 * 220.05206 * 8 7 5 11 11 C 1.34772 * 119.99630 * 254.13324 * 10 8 7 12 12 O 1.21287 * 120.00260 * 0.02562 * 11 10 8 13 13 C 1.50703 * 119.99833 * 180.27210 * 11 10 8 14 14 C 1.52996 * 109.47308 * 294.72730 * 13 11 10 15 15 O 1.42906 * 109.46966 * 174.72684 * 13 11 10 16 16 C 1.35894 * 116.99718 * 204.92058 * 15 13 11 17 17 C 1.38736 * 120.05614 * 174.25962 * 16 15 13 18 18 C 1.38142 * 119.94300 * 179.69942 * 17 16 15 19 19 C 1.38268 * 120.05521 * 0.59063 * 18 17 16 20 20 C 1.50708 * 119.93925 * 179.69980 * 19 18 17 21 21 O 1.42905 * 109.46517 * 119.98391 * 20 19 18 22 22 Si 1.86294 * 109.47343 * 359.97438 * 20 19 18 23 23 C 1.38262 * 120.11528 * 359.68063 * 19 18 17 24 24 C 1.38151 * 120.05249 * 0.02583 * 23 19 18 25 25 C 1.53782 * 113.61733 * 179.97438 * 5 3 2 26 26 H 1.09000 * 109.46877 * 60.00808 * 1 2 3 27 27 H 1.09004 * 109.46996 * 180.02562 * 1 2 3 28 28 H 1.08994 * 109.47384 * 300.00612 * 1 2 3 29 29 H 1.08992 * 113.61083 * 25.41468 * 7 5 3 30 30 H 1.08996 * 113.66624 * 254.45807 * 7 5 3 31 31 H 0.96998 * 119.99765 * 74.13563 * 10 8 7 32 32 H 1.09000 * 109.46955 * 54.72880 * 13 11 10 33 33 H 1.09000 * 109.47015 * 60.00034 * 14 13 11 34 34 H 1.08999 * 109.47110 * 180.02562 * 14 13 11 35 35 H 1.09000 * 109.47235 * 299.99979 * 14 13 11 36 36 H 1.08001 * 120.02407 * 359.97438 * 17 16 15 37 37 H 1.08002 * 119.97110 * 180.26830 * 18 17 16 38 38 H 1.08996 * 109.47017 * 239.97280 * 20 19 18 39 39 H 0.96701 * 113.99796 * 299.99204 * 21 20 19 40 40 H 1.48499 * 109.99777 * 179.97438 * 22 20 19 41 41 H 1.48503 * 109.99866 * 301.31584 * 22 20 19 42 42 H 1.07994 * 119.97394 * 180.02562 * 23 19 18 43 43 H 1.07998 * 120.02823 * 180.02562 * 24 23 19 44 44 H 1.08998 * 113.61189 * 105.47115 * 25 5 3 45 45 H 1.08994 * 113.61203 * 334.57206 * 25 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2750 0.0006 6 1 4.0233 0.6365 0.7567 7 6 4.1937 1.1217 -1.3970 8 6 5.1814 2.2266 -0.9866 9 1 6.0816 1.8494 -0.5013 10 7 5.4709 3.1827 -2.0584 11 6 6.6576 3.1412 -2.6959 12 8 7.4857 2.3122 -2.3827 13 6 6.9577 4.1286 -3.7942 14 6 6.0125 3.8841 -4.9721 15 8 8.3099 3.9639 -4.2263 16 6 8.9109 5.0411 -4.7964 17 6 10.2566 4.9903 -5.1300 18 6 10.8637 6.0846 -5.7151 19 6 10.1343 7.2341 -5.9571 20 6 10.8010 8.4287 -6.5893 21 8 10.1473 8.7425 -7.8208 22 14 12.5925 8.0381 -6.9188 23 6 8.7945 7.2893 -5.6204 24 6 8.1812 6.1955 -5.0406 25 6 4.1077 2.7143 -0.0001 26 1 -0.3633 0.5137 -0.8901 27 1 -0.3633 -1.0277 0.0005 28 1 -0.3634 0.5139 0.8899 29 1 3.5270 1.4115 -2.2090 30 1 4.6658 0.1530 -1.5608 31 1 4.8084 3.8454 -2.3090 32 1 6.8169 5.1425 -3.4197 33 1 4.9811 4.0098 -4.6425 34 1 6.2299 4.5979 -5.7666 35 1 6.1533 2.8702 -5.3466 36 1 10.8279 4.0945 -4.9365 37 1 11.9102 6.0440 -5.9790 38 1 10.7333 9.2820 -5.9145 39 1 10.1684 8.0268 -8.4707 40 1 13.2609 9.2081 -7.5429 41 1 13.2757 7.6793 -5.6501 42 1 8.2269 8.1881 -5.8108 43 1 7.1345 6.2389 -4.7782 44 1 4.5104 3.0297 0.9624 45 1 3.4174 3.4402 -0.4297 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10970304_10157680.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:33:42 Heat of formation + Delta-G solvation = -127.277390 kcal Electronic energy + Delta-G solvation = -28205.571200 eV Core-core repulsion = 23963.586891 eV Total energy + Delta-G solvation = -4241.984309 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.150 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -42.10389 -41.66222 -40.71431 -39.53832 -38.73660 -37.37223 -37.14370 -34.92285 -33.12633 -32.07768 -31.39862 -29.44171 -27.25841 -27.01571 -26.63257 -25.38430 -24.16064 -22.82476 -22.17626 -21.56958 -20.74310 -19.55124 -18.99965 -18.51370 -18.18769 -17.94767 -17.43624 -17.12220 -16.86428 -16.46442 -16.36218 -16.28009 -15.93618 -15.65599 -15.48488 -15.16603 -14.73530 -14.51579 -14.38725 -14.35630 -14.20929 -13.81318 -13.75465 -13.54233 -13.49991 -13.39521 -13.09297 -12.94265 -12.68596 -12.43828 -12.25537 -12.10382 -12.00746 -11.94748 -11.83933 -11.66840 -11.43047 -10.85166 -10.43054 -10.26608 -10.06071 -9.20205 -5.03284 0.23212 0.33325 1.08303 1.30623 1.36020 1.40597 1.63438 1.70077 1.97849 2.43617 2.65066 3.07961 3.13964 3.34580 3.46683 3.47922 3.53178 3.60294 3.69056 3.70386 3.82729 3.84666 3.90605 4.11480 4.18821 4.19605 4.24123 4.31468 4.38584 4.39992 4.44319 4.45709 4.54734 4.55524 4.60018 4.64224 4.72324 4.86015 4.91594 4.97502 5.16990 5.27138 5.28443 5.33810 5.46830 5.64363 6.18015 6.34026 6.57451 6.66697 7.00947 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.356 6.356 3 C 0.472 3.528 4 O -0.505 6.505 5 C -0.109 4.109 6 H 0.133 0.867 7 C -0.134 4.134 8 C 0.127 3.873 9 H 0.126 0.874 10 N -0.716 5.716 11 C 0.521 3.479 12 O -0.509 6.509 13 C 0.066 3.934 14 C -0.177 4.177 15 O -0.283 6.283 16 C 0.135 3.865 17 C -0.141 4.141 18 C -0.076 4.076 19 C -0.158 4.158 20 C -0.063 4.063 21 O -0.542 6.542 22 Si 0.686 3.314 23 C -0.051 4.051 24 C -0.212 4.212 25 C -0.126 4.126 26 H 0.064 0.936 27 H 0.104 0.896 28 H 0.064 0.936 29 H 0.092 0.908 30 H 0.091 0.909 31 H 0.404 0.596 32 H 0.101 0.899 33 H 0.079 0.921 34 H 0.079 0.921 35 H 0.077 0.923 36 H 0.138 0.862 37 H 0.134 0.866 38 H 0.112 0.888 39 H 0.379 0.621 40 H -0.255 1.255 41 H -0.258 1.258 42 H 0.129 0.871 43 H 0.131 0.869 44 H 0.090 0.910 45 H 0.104 0.896 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.965 -1.393 -1.206 3.491 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.315 3.685 4 O -0.392 6.392 5 C -0.129 4.129 6 H 0.150 0.850 7 C -0.173 4.173 8 C 0.022 3.978 9 H 0.143 0.857 10 N -0.370 5.370 11 C 0.306 3.694 12 O -0.383 6.383 13 C 0.006 3.994 14 C -0.235 4.235 15 O -0.196 6.196 16 C 0.089 3.911 17 C -0.160 4.160 18 C -0.093 4.093 19 C -0.158 4.158 20 C -0.174 4.174 21 O -0.347 6.347 22 Si 0.588 3.412 23 C -0.069 4.069 24 C -0.230 4.230 25 C -0.164 4.164 26 H 0.082 0.918 27 H 0.122 0.878 28 H 0.083 0.917 29 H 0.111 0.889 30 H 0.110 0.890 31 H 0.239 0.761 32 H 0.118 0.882 33 H 0.098 0.902 34 H 0.098 0.902 35 H 0.096 0.904 36 H 0.155 0.845 37 H 0.151 0.849 38 H 0.130 0.870 39 H 0.226 0.774 40 H -0.180 1.180 41 H -0.183 1.183 42 H 0.147 0.853 43 H 0.149 0.851 44 H 0.109 0.891 45 H 0.122 0.878 Dipole moment (debyes) X Y Z Total from point charges -1.751 -1.128 -0.473 2.136 hybrid contribution -1.356 0.676 0.398 1.567 sum -3.107 -0.451 -0.075 3.141 Atomic orbital electron populations 1.23334 0.75851 1.04088 1.02713 1.86523 1.23783 1.33227 1.83723 1.23451 0.91544 0.81450 0.72059 1.90684 1.66982 1.36437 1.45146 1.22337 0.87774 1.00934 1.01844 0.84954 1.23492 0.97884 1.01246 0.94629 1.22473 0.97957 0.89489 0.87869 0.85662 1.45810 1.17219 1.36590 1.37337 1.20129 0.82020 0.84935 0.82347 1.90779 1.46143 1.37039 1.64298 1.22196 0.82683 0.99691 0.94841 1.22356 0.98661 1.04857 0.97623 1.86222 1.25826 1.33983 1.73538 1.19080 0.92417 0.86082 0.93503 1.20415 0.91922 1.00322 1.03344 1.20840 0.99200 0.92019 0.97274 1.20249 0.95255 0.96181 1.04148 1.24964 1.07340 0.97551 0.87528 1.86495 1.79842 1.43760 1.24619 0.94739 0.74578 0.86163 0.85676 1.20790 0.93871 0.97699 0.94525 1.21329 1.00752 0.94143 1.06803 1.23373 0.97025 0.95032 1.00979 0.91756 0.87782 0.91694 0.88936 0.89003 0.76081 0.88188 0.90207 0.90184 0.90359 0.84455 0.84917 0.87043 0.77371 1.17999 1.18250 0.85266 0.85097 0.89130 0.87796 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.56 101.05 1.07 1.03 16 2 O -0.36 -0.29 10.57 -39.26 -0.41 -0.71 16 3 C 0.47 0.42 7.49 36.00 0.27 0.69 16 4 O -0.51 -1.77 15.65 -18.75 -0.29 -2.06 16 5 C -0.11 0.22 4.26 -90.87 -0.39 -0.17 16 6 H 0.13 -0.47 8.14 -51.93 -0.42 -0.89 16 7 C -0.13 0.29 7.44 -25.82 -0.19 0.10 16 8 C 0.13 -0.25 4.21 -67.13 -0.28 -0.53 16 9 H 0.13 -0.11 7.50 -51.93 -0.39 -0.50 16 10 N -0.72 1.50 5.33 -53.03 -0.28 1.22 16 11 C 0.52 0.53 7.18 -10.99 -0.08 0.45 16 12 O -0.51 -2.85 16.13 -14.31 -0.23 -3.08 16 13 C 0.07 -0.04 2.64 -27.88 -0.07 -0.11 16 14 C -0.18 0.46 9.13 37.16 0.34 0.80 16 15 O -0.28 -0.72 9.34 -39.27 -0.37 -1.08 16 16 C 0.13 0.21 6.60 -39.21 -0.26 -0.05 16 17 C -0.14 -0.16 9.99 -39.43 -0.39 -0.55 16 18 C -0.08 0.00 8.66 -39.61 -0.34 -0.34 16 19 C -0.16 -0.03 5.39 -104.60 -0.56 -0.59 16 20 C -0.06 0.02 2.82 36.01 0.10 0.12 16 21 O -0.54 -0.06 12.77 -35.23 -0.45 -0.51 16 22 Si 0.69 -0.64 29.78 -169.99 -5.06 -5.71 16 23 C -0.05 -0.01 9.60 -39.60 -0.38 -0.39 16 24 C -0.21 0.00 8.24 -39.43 -0.32 -0.32 16 25 C -0.13 0.32 7.15 -25.93 -0.19 0.14 16 26 H 0.06 -0.07 8.13 -51.93 -0.42 -0.49 16 27 H 0.10 -0.35 8.14 -51.93 -0.42 -0.77 16 28 H 0.06 -0.07 8.13 -51.93 -0.42 -0.49 16 29 H 0.09 -0.20 8.10 -51.93 -0.42 -0.62 16 30 H 0.09 -0.20 8.14 -51.93 -0.42 -0.62 16 31 H 0.40 -1.91 8.51 -40.82 -0.35 -2.25 16 32 H 0.10 -0.27 6.32 -51.93 -0.33 -0.60 16 33 H 0.08 -0.39 7.94 -51.93 -0.41 -0.80 16 34 H 0.08 -0.22 6.91 -51.93 -0.36 -0.58 16 35 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 36 H 0.14 0.05 8.06 -52.49 -0.42 -0.37 16 37 H 0.13 -0.25 4.87 -52.49 -0.26 -0.51 16 38 H 0.11 0.02 7.96 -51.93 -0.41 -0.39 16 39 H 0.38 -1.39 8.70 45.56 0.40 -0.99 16 40 H -0.25 -0.60 7.11 56.52 0.40 -0.19 16 41 H -0.26 -0.37 7.11 56.52 0.40 0.03 16 42 H 0.13 -0.08 8.06 -52.49 -0.42 -0.50 16 43 H 0.13 -0.29 5.43 -52.49 -0.28 -0.58 16 44 H 0.09 -0.28 8.14 -51.93 -0.42 -0.71 16 45 H 0.10 -0.21 7.40 -51.93 -0.38 -0.60 16 LS Contribution 377.85 15.07 5.69 5.69 Total: 0.00 -10.62 377.85 -9.29 -19.91 By element: Atomic # 1 Polarization: -7.74 SS G_CDS: -6.20 Total: -13.94 kcal Atomic # 6 Polarization: 1.95 SS G_CDS: -1.69 Total: 0.26 kcal Atomic # 7 Polarization: 1.50 SS G_CDS: -0.28 Total: 1.22 kcal Atomic # 8 Polarization: -5.68 SS G_CDS: -1.76 Total: -7.44 kcal Atomic # 14 Polarization: -0.64 SS G_CDS: -5.06 Total: -5.71 kcal Total LS contribution 5.69 Total: 5.69 kcal Total: -10.62 -9.29 -19.91 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_10157680.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -107.366 kcal (2) G-P(sol) polarization free energy of solvation -10.617 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -117.983 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.295 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.911 kcal (6) G-S(sol) free energy of system = (1) + (5) -127.277 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds